Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 1.1e-201 706.4 367 100.0
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 1.6e-152 543.1 368 76.1
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 1.4e-135 486.9 373 68.1
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.4e-135 486.9 372 67.7
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 1.8e-135 486.5 372 69.9
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 1.8e-135 486.5 366 67.5
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 2.4e-135 486.1 373 68.9
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 3.1e-135 485.7 372 67.5
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 9.0e-135 484.2 372 67.2
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 9.9e-134 480.7 373 68.6
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 9.3e-132 474.2 365 67.4
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.3e-130 470.3 372 66.7
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 1.8e-130 469.9 364 66.8
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.8e-130 469.9 368 66.3
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 1.1e-129 467.2 367 65.9
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 1.5e-129 466.8 375 66.1
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 4.8e-128 461.8 381 63.8
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.1e-128 461.1 366 64.8
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.8e-127 459.9 366 64.5
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 2.2e-125 453.0 372 64.0
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 2.9e-125 452.6 367 64.3
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 6.4e-125 451.4 370 63.0
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 1.9e-124 449.9 370 64.9
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 3.2e-124 449.1 373 64.3
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 7.1e-124 448.0 370 65.1
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 1.8e-122 443.4 374 61.0
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 3.9e-122 442.2 364 61.5
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 1.1e-121 440.7 373 61.7
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 2.5e-121 439.5 374 63.1
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 1.3e-120 437.2 374 60.4
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 2.1e-120 436.4 369 60.7
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 2.8e-120 436.0 370 63.0
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 6.9e-119 431.4 372 60.5
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 4.5e-118 428.7 373 60.9
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 7.6e-118 427.9 371 60.1
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.0e-117 427.6 368 59.8
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 1.3e-117 427.2 366 58.5
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 1.3e-117 427.2 366 58.5
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 2.2e-117 426.4 373 60.6
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 4.9e-117 425.2 370 58.6
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 8.4e-117 424.5 366 59.3
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 3.2e-116 422.5 367 61.0
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 7.1e-116 421.4 320 68.1
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 9.3e-116 421.0 371 56.9
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 1.6e-115 420.2 363 58.7
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 4.6e-115 418.7 368 60.1
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 1.3e-114 417.2 369 59.3
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 2.3e-114 416.4 368 59.8
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 3.9e-114 415.6 375 61.3
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 6.7e-114 414.8 368 58.7
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 1.5e-113 413.7 372 58.9
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 5.7e-113 411.8 368 59.5
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 7.4e-113 411.4 367 58.9
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 7.4e-113 411.4 372 58.3
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 2.1e-112 409.8 367 59.1
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 3.7e-112 409.1 361 56.5
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 3.7e-112 409.1 367 56.9
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 8.2e-112 407.9 367 58.3
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 1.1e-111 407.5 371 58.5
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.4e-111 407.1 373 60.3
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 4.1e-111 405.6 368 56.0
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 6.9e-111 404.8 368 57.6
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.5e-110 403.7 368 56.0
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 2.0e-110 403.3 369 58.8
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 3.4e-110 402.5 369 58.5
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 3.4e-110 402.5 372 56.2
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 3.4e-110 402.5 369 57.5
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 1.0e-109 401.0 367 56.9
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.0e-109 401.0 313 66.1
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 1.3e-109 400.6 369 58.5
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 2.9e-109 399.4 372 56.5
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 3.8e-109 399.1 368 55.4
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.1e-108 397.5 369 60.2
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.4e-108 397.1 383 54.6
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 1.4e-108 397.1 368 54.9
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 1.9e-108 396.7 363 58.7
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 2.5e-108 396.4 316 64.9
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 4.2e-108 395.6 370 57.8
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 2.7e-107 392.9 367 58.9
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 6.1e-107 391.7 370 58.1
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 6.1e-107 391.7 371 58.0
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 3.0e-106 389.4 369 58.8
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 3.9e-106 389.0 368 57.3
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 2.5e-105 386.3 370 57.3
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.3e-105 386.0 384 56.0
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 3.3e-105 386.0 373 54.2
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 4.3e-105 385.6 409 51.1
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 1.3e-104 384.0 370 57.0
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 1.3e-104 384.0 330 60.0
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 3.7e-104 382.5 312 64.1
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 4.8e-104 382.1 399 51.4
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 6.3e-104 381.7 369 56.1
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 8.2e-104 381.3 367 57.5
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 1.1e-103 380.9 486 48.6
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 1.8e-103 380.2 368 57.3
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 5.3e-103 378.6 387 53.2
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.6e-102 376.3 372 54.8
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 2.6e-102 376.3 374 52.1
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 1.3e-101 374.0 368 57.3
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 2.9e-101 372.9 409 51.6
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 5.0e-101 372.1 366 57.7
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 1.4e-100 370.5 404 52.7
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 2.5e-100 369.8 368 56.2
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 4.2e-100 369.0 372 56.7
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 7.2e-100 368.2 508 46.1
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 9.4e-100 367.9 400 52.5
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.2e-99 367.5 368 54.9
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 1.6e-99 367.1 371 55.5
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 3.6e-99 365.9 365 52.3
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 6.1e-99 365.2 370 55.7
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 6.1e-99 365.2 352 55.7
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 2.3e-98 363.2 357 57.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 2.3e-98 363.2 563 42.6
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.5e-97 360.5 353 57.8
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 7.4e-97 358.2 356 57.3
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 7.4e-97 358.2 381 54.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 7.4e-97 358.2 353 57.5
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 1.4e-95 354.0 295 61.4
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 2.2e-93 346.7 367 51.2
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 8.5e-93 344.7 316 57.3
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 8.5e-93 344.7 286 61.2
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 9.4e-92 341.3 374 49.7
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 1.6e-91 340.5 362 49.4
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 7.9e-91 338.2 375 52.5
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 1.4e-90 337.4 372 48.1
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 3.9e-90 335.9 312 55.8
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 5.7e-89 332.0 354 53.7
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 2.0e-86 323.6 313 55.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.1e-79 301.2 299 56.9
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 4.1e-79 299.3 477 39.8
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.5e-76 290.0 311 51.8
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.3e-69 266.9 210 66.2
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 5.2e-66 255.8 208 61.5
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 5.2e-66 255.8 314 43.6
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.2e-65 254.6 210 63.3
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.8e-65 251.5 206 64.1
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 9.8e-65 251.5 379 36.7
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.7e-64 250.8 313 47.0
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 3.7e-64 249.6 220 59.1
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 4.9e-64 249.2 202 62.9
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 6.3e-64 248.8 208 61.5
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.8e-63 247.3 206 63.1
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 7.3e-60 235.3 172 70.9
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.6e-59 234.2 172 70.9
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 2.8e-59 233.4 334 39.2
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 4.7e-59 232.6 172 69.8
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.4e-58 231.1 164 71.3
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 5.2e-58 229.2 169 70.4
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 9.8e-57 224.9 374 37.7
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.3e-56 224.6 377 36.6
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.3e-56 224.6 378 37.0
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.2e-56 223.8 162 70.4
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 1.8e-55 220.7 165 66.7
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 3.9e-53 213.0 172 66.9
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 5.0e-53 212.6 369 34.7
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 5.0e-53 212.6 380 35.3
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 7.3e-52 208.8 265 46.0
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.6e-51 206.5 189 60.3
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.0e-49 200.7 155 64.5
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.2e-43 181.4 164 57.9
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 2.1e-43 180.6 369 32.5
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 2.8e-43 180.3 203 44.8
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.9e-39 167.5 161 52.8
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.1e-39 166.4 110 75.5
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.2e-38 164.9 130 66.2
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 3.5e-38 163.3 233 43.3
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 7.8e-38 162.2 253 39.1
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.7e-37 161.0 152 59.2
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 6.2e-35 152.5 138 56.5
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 8.4e-32 142.1 167 46.7
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 3.2e-31 140.2 131 55.7
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 1.3e-29 134.8 139 53.2
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 8.7e-29 132.1 134 53.0
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 1.3e-24 118.2 130 49.2
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 5.4e-23 112.8 257 30.4
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 8.1e-19 99.0 306 29.7
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 1.3e-08 65.1 410 24.1


User provided reference genes

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