Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 3.2e-29 131.3 66 100.0
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.1e-13 79.7 68 66.2
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 7.2e-13 77.0 73 63.0
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 1.8e-11 72.4 65 60.0
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 1.8e-11 72.4 65 60.0
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 6.7e-11 70.5 69 60.9
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.6e-10 68.6 70 61.4
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 2.6e-10 68.6 67 62.7
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 4.4e-10 67.8 65 55.4
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 4.4e-10 67.8 65 55.4
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.7e-09 65.9 68 58.8
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.7e-09 65.9 69 58.0
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.7e-09 64.7 73 56.2
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 6.3e-09 63.9 63 57.1
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 6.3e-09 63.9 63 57.1
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.1e-08 63.2 66 56.1
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 2.4e-08 62.0 69 52.2
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.4e-08 62.0 73 54.8
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 5.3e-08 60.8 70 52.9
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 7.0e-08 60.5 68 52.9
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 7.0e-08 60.5 73 52.1
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 9.1e-08 60.1 73 53.4
Manes.05G132900 Manihot esculenta HOM05D008114 ORTHO05D010089 1.2e-07 59.7 70 48.6
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 1.6e-07 59.3 65 52.3
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 3.5e-07 58.2 67 56.7
Ciclev10023125m.g Citrus clementina HOM05D008114 ORTHO05D010089 5.9e-07 57.4 70 51.4
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 5.9e-07 57.4 66 51.5
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 1.7e-06 55.8 65 46.2
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.2e-06 55.5 47 63.8
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.2e-06 55.5 68 51.5
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.2e-06 55.5 68 51.5
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.9e-06 55.1 63 47.6
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 3.8e-06 54.7 70 48.6
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 6.5e-06 53.9 69 46.4
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 8.5e-06 53.5 46 58.7


User provided reference genes

Program Settings