Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.2e-52 209.5 107 100.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.6e-42 175.3 107 82.2
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 7.6e-42 173.7 107 80.4
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.3e-41 172.9 106 84.9
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.3e-41 172.9 108 82.4
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.8e-41 171.4 107 82.2
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 3.8e-41 171.4 109 80.7
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 6.4e-41 170.6 108 83.3
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 85.2
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 85.2
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.1e-40 169.9 107 79.4
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.1e-40 169.9 107 83.2
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.9e-40 169.1 102 84.3
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 5.4e-40 167.5 107 79.4
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 5.4e-40 167.5 108 83.3
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 5.4e-40 167.5 108 83.3
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 5.4e-40 167.5 108 83.3
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 5.4e-40 167.5 107 78.5
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.2e-39 166.4 109 81.7
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.2e-39 166.4 108 79.6
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.6e-39 166.0 102 83.3
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.6e-39 166.0 105 80.0
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 2.7e-39 165.2 102 82.4
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 4.6e-39 164.5 105 78.1
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.7e-38 162.5 102 82.4
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.0e-38 161.8 108 76.9
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.0e-38 161.8 108 76.9
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 3.9e-38 161.4 99 80.8
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 5.1e-38 161.0 105 75.2
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 5.1e-38 161.0 101 81.2
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 5.1e-38 161.0 100 80.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 6.6e-38 160.6 105 75.2
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 8.6e-38 160.2 105 76.2
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.9e-37 159.1 105 75.2
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.9e-37 159.1 108 74.1
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.9e-37 159.1 107 73.8
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.5e-37 158.7 105 75.2
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.5e-37 158.7 99 76.8
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.5e-37 158.7 99 76.8
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.5e-37 158.7 99 76.8
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 2.5e-37 158.7 107 72.9
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.5e-37 158.7 97 80.4
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 5.6e-37 157.5 99 76.8
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 7.3e-37 157.1 100 80.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 9.6e-37 156.8 105 73.3
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 9.6e-37 156.8 103 77.7
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 9.6e-37 156.8 103 77.7
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.2e-36 156.4 97 82.5
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.6e-36 156.0 101 76.2
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-36 155.6 105 73.3
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 2.1e-36 155.6 97 81.4
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.8e-36 155.2 102 71.6
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.8e-36 155.2 93 80.6
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 3.6e-36 154.8 105 73.3
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 3.6e-36 154.8 97 81.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 6.2e-36 154.1 105 72.4
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 6.2e-36 154.1 100 75.0
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 8.1e-36 153.7 103 78.6
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.1e-35 153.3 100 72.0
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.1e-35 153.3 102 70.6
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.4e-35 152.9 102 70.6
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.4e-35 152.9 99 78.8
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.8e-35 152.5 100 71.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 2.4e-35 152.1 102 70.6
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 2.4e-35 152.1 102 70.6
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 4.0e-35 151.4 99 73.7
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 4.0e-35 151.4 100 74.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 4.0e-35 151.4 100 74.0
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 5.2e-35 151.0 105 72.4
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 6.9e-35 150.6 105 74.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 9.0e-35 150.2 100 70.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.2e-34 149.8 103 72.8
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.5e-34 149.4 102 72.5
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.5e-34 149.4 102 69.6
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.0e-34 149.1 91 76.9
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.4e-34 148.3 98 70.4
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 3.4e-34 148.3 92 77.2
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 4.4e-34 147.9 137 60.6
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 5.8e-34 147.5 97 70.1
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 7.6e-34 147.1 93 77.4
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.7e-33 146.0 102 68.6
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 8.4e-33 143.7 98 73.5
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 1.4e-32 142.9 93 74.2
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.9e-32 142.5 96 75.0
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 4.2e-32 141.4 153 56.9
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 5.4e-32 141.0 102 66.7
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 7.1e-32 140.6 87 80.5
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.6e-31 139.4 93 69.9
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.7e-31 138.7 95 69.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 3.5e-31 138.3 87 80.5
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 2.3e-30 135.6 88 80.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 6.6e-30 134.0 87 79.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 8.7e-30 133.7 94 73.4
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.6e-28 129.4 88 77.3
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-28 128.3 96 66.7
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.8e-27 125.9 81 71.6
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 9.0e-27 123.6 80 72.5
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 2.6e-26 122.1 91 63.7
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.6e-26 122.1 94 63.8
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 5.8e-26 120.9 82 68.3
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 7.6e-26 120.6 89 64.0
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.8e-25 118.2 87 71.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 2.1e-23 112.5 78 67.9
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.1e-21 106.7 82 69.5
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 7.4e-21 104.0 91 56.0
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.6e-20 102.8 77 71.4
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 4.0e-19 98.2 70 68.6
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 5.3e-19 97.8 98 55.1
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 9.0e-19 97.1 88 53.4
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.7e-17 92.8 58 77.6
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 3.8e-17 91.7 56 83.9
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-15 86.7 55 76.4
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 4.3e-13 78.2 58 70.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 5.6e-13 77.8 53 75.5
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 4.5e-10 68.2 52 59.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 2.2e-09 65.9 48 62.5
Lj3C809T12 Lonicera japonica HOM05D000039 ORTHO05D029999 1.0e-06 57.0 53 52.8


User provided reference genes

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