Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.405 Acer truncatum HOM05D009211 ORTHO05D011170 9.4e-83 310.1 149 100.0
Actinidia04839 Actinidia chinensis HOM05D009211 ORTHO05D011170 6.4e-31 137.9 145 50.3
Haze_07693 Corylus avellana HOM05D009211 ORTHO05D011170 6.4e-31 137.9 152 53.9
Thecc.03G098100 Theobroma cacao HOM05D009211 ORTHO05D011170 1.3e-28 130.2 150 50.0
Potri.012G066250 Populus trichocarpa HOM05D009211 ORTHO05D011170 3.0e-28 129.0 148 50.0
Cfa019310 Carpinus fangiana HOM05D009211 ORTHO05D011170 8.7e-28 127.5 139 53.2
Prupe.5G202900 Prunus persica HOM05D009211 ORTHO05D011170 4.7e-26 121.7 129 51.9
Manes.06G086800 Manihot esculenta HOM05D009211 ORTHO05D011170 6.2e-26 121.3 147 50.3
CSS0047999 Camellia sinensis var. sinensis HOM05D009211 ORTHO05D011170 1.1e-25 120.6 146 46.6
QL10p018860 Quercus lobata HOM05D009211 ORTHO05D011170 2.0e-24 116.3 121 52.1
CiPaw.11G050900 Carya illinoinensis HOM05D009211 ORTHO05D011170 5.8e-24 114.8 133 52.6
COL.COLO4_22212 Corchorus olitorius HOM05D009211 ORTHO05D011170 6.4e-23 111.3 122 49.2
Gorai.008G197300 Gossypium raimondii HOM05D009211 ORTHO05D011170 3.2e-22 109.0 145 46.2
FAN18G1019 Fragaria x ananassa HOM05D009211 ORTHO05D011170 1.7e-20 103.2 154 42.2
FAN08G0220 Fragaria x ananassa HOM05D009211 ORTHO05D011170 3.9e-20 102.1 154 41.6
FAN13G1505 Fragaria x ananassa HOM05D009211 ORTHO05D011170 6.6e-20 101.3 154 41.6
FvH4_5g14220 Fragaria vesca HOM05D009211 ORTHO05D011170 1.1e-19 100.5 154 42.2
Cpa.g.sc94.21 Carica papaya HOM05D009211 ORTHO05D011170 1.1e-17 94.0 127 44.9
Aqoxy3G00486 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 6.9e-17 91.3 143 41.3
Gohir.A12G181250 Gossypium hirsutum HOM05D009211 ORTHO05D011170 1.5e-16 90.1 89 53.9
Migut.I00442 Erythranthe guttata HOM05D009211 ORTHO05D011170 9.9e-16 87.4 116 44.0
Aqoxy1G00314 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 1.7e-15 86.7 144 39.6
Oeu038366.1 Olea europaea HOM05D009211 ORTHO05D011170 1.1e-14 84.0 107 48.6
TPR.G2006 Trifolium pratense HOM05D009211 ORTHO05D011170 7.9e-13 77.8 134 35.1
Nitab4.5_0001688g0080 Nicotiana tabacum HOM05D009211 ORTHO05D011170 2.3e-12 76.3 112 42.9
VMungo1215G2572 Vigna mungo HOM05D009211 ORTHO05D011170 3.9e-12 75.5 152 38.8
Medtr4g109380 Medicago truncatula HOM05D009211 ORTHO05D011170 5.1e-12 75.1 144 33.3
Ca_21787_v3 Cicer arietinum L. HOM05D009211 ORTHO05D011170 3.3e-11 72.4 135 37.0
Glyma.17G077200 Glycine max HOM05D009211 ORTHO05D011170 3.3e-11 72.4 138 34.1
Phvul.003G185900 Phaseolus vulgaris HOM05D009211 ORTHO05D011170 3.3e-11 72.4 135 38.5
Lj4g0005212 Lotus japonicus HOM05D009211 ORTHO05D011170 1.8e-09 66.6 133 36.1
DCAR_021511 Daucus carota HOM05D000113 ORTHO05D002571 4.0e-09 65.5 124 36.3
CAN.G587.37 Capsicum annuum HOM05D035866 ORTHO05D011170 2.0e-08 63.2 118 34.7
Sopen06g026830 Solanum pennellii HOM05D035866 ORTHO05D011170 2.2e-07 59.7 112 34.8
CsaV3_4G014680 Cucumis sativus L. HOM05D065616 ORTHO05D045016 6.4e-07 58.2 112 40.2
Solyc06g069540.1 Solanum lycopersicum HOM05D035866 ORTHO05D011170 6.4e-07 58.2 115 35.7


User provided reference genes

Program Settings