Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.330 Acer truncatum HOM05D005324 ORTHO05D001185 9.3e-192 673.3 328 100.0
Atru.chr7.181 Acer truncatum HOM05D005324 ORTHO05D001185 1.3e-132 476.9 314 73.6
Atru.chr1.2264 Acer truncatum HOM05D005324 ORTHO05D001185 5.6e-112 408.3 242 83.1
Atru.chr5.1824 Acer truncatum HOM05D005324 ORTHO05D001185 5.6e-112 408.3 206 92.2
Atru.chr10.1416 Acer truncatum HOM05D005324 ORTHO05D001185 3.6e-111 405.6 309 66.3
Atru.chr4.1769 Acer truncatum HOM05D005324 ORTHO05D001185 1.9e-107 393.3 298 62.1
Atru.chr4.310 Acer truncatum HOM05D005324 ORTHO05D001185 1.6e-103 380.2 295 63.7
Atru.chr13.2110 Acer truncatum HOM05D005324 ORTHO05D001185 1.9e-99 366.7 271 63.5
Atru.chr4.959 Acer truncatum HOM05D005324 ORTHO05D001185 1.0e-97 360.9 214 82.7
Atru.chr5.1763 Acer truncatum HOM05D005324 ORTHO05D001185 4.8e-87 325.5 235 63.8
Ca_22549_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.7e-79 299.3 316 44.3
Lj3g0022640 Lotus japonicus HOM05D005324 ORTHO05D001185 2.6e-77 293.1 325 43.7
Lj6g0006708 Lotus japonicus HOM05D005324 ORTHO05D001185 4.5e-77 292.4 327 45.0
Ca_11659_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.9e-76 289.7 315 43.2
Lj6g0011364 Lotus japonicus HOM05D005324 ORTHO05D001185 8.4e-76 288.1 309 45.0
Ca_05875_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.5e-72 276.6 291 45.4
Ca_14742_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.7e-72 275.4 299 44.1
Ca_14156_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.6e-71 273.9 296 45.3
Lj2g0007658 Lotus japonicus HOM05D005324 ORTHO05D001185 6.3e-71 271.9 309 43.7
Ca_22528_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.2e-68 263.5 287 44.6
Ca_23895_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.9e-67 260.4 289 43.6
Lj4g0014350 Lotus japonicus HOM05D005324 ORTHO05D001185 4.2e-67 259.2 309 39.8
Atru.chr1.2372 Acer truncatum HOM05D005324 ORTHO05D001185 7.4e-64 248.4 155 72.9
Ca_24116_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 9.7e-64 248.1 261 46.7
Ca_25846_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.8e-63 246.5 298 41.3
Ca_03092_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.0e-61 240.4 203 52.2
Ca_13672_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.4e-61 239.6 203 51.7
Ca_22741_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.7e-60 237.3 203 52.2
Ca_30430_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.7e-60 237.3 253 45.1
Ca_30934_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.9e-59 233.8 200 52.0
Ca_14697_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.7e-57 225.3 299 38.5
Ca_14332_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.0e-56 223.8 315 38.1
Atru.chr3.3306 Acer truncatum HOM05D000477 ORTHO05D001185 2.2e-55 220.3 336 38.7
Ca_14762_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.7e-55 219.5 181 54.7
Lj4g0024804 Lotus japonicus HOM05D005324 ORTHO05D001185 4.8e-55 219.2 286 40.6
Ca_25326_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.1e-54 218.0 203 49.8
Ca_19341_v3 Cicer arietinum L. HOM05D005324 ORTHO05D000048 2.4e-54 216.9 303 38.6
Ca_23844_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.4e-53 213.0 319 37.9
Ca_30746_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.4e-53 213.0 319 37.9
Ca_02976_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.1e-51 208.0 185 50.3
Ca_30800_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.2e-50 204.5 321 37.1
COL.COLO4_29280 Corchorus olitorius HOM05D003376 ORTHO05D001185 1.0e-49 201.4 340 35.6
Atru.chr13.2462 Acer truncatum HOM05D005324 ORTHO05D001185 8.8e-49 198.4 232 46.1
Cc00_g34090 Coffea canephora HOM05D005324 ORTHO05D001185 1.5e-48 197.6 313 37.1
Thhalv10012231m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.2e-47 193.7 326 38.0
Thecc.01G138000 Theobroma cacao HOM05D005324 ORTHO05D001185 2.4e-46 190.3 206 46.1
CANSAT80G1954 Cannabis sativa HOM05D005324 ORTHO05D001185 1.6e-45 187.6 260 37.7
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 5.9e-45 185.7 157 57.3
Thhalv10028029m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.3e-44 184.5 348 35.9
Thhalv10003417m.g Eutrema salsugineum HOM05D003376 ORTHO05D000048 5.0e-44 182.6 328 34.5
Thhalv10023188m.g Eutrema salsugineum HOM05D003376 ORTHO05D000002 8.5e-44 181.8 310 37.7
Ca_23845_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.5e-43 181.0 200 45.0
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.9e-43 180.6 311 35.4
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.9e-43 180.6 310 35.8
Atru.chr1.2076 Acer truncatum HOM05D005324 ORTHO05D001185 2.5e-43 180.3 309 35.9
Thhalv10002934m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.5e-43 180.3 329 34.7
Thhalv10028343m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.5e-43 180.3 328 33.5
AL8G17360 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 4.2e-43 179.5 311 36.0
Atru.chr3.2328 Acer truncatum HOM05D005324 ORTHO05D001185 7.2e-43 178.7 107 72.0
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.2e-42 177.9 314 34.7
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.4e-41 174.5 310 34.8
Ca_14763_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 8.8e-41 171.8 309 32.4
AL8G17320 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 2.6e-40 170.2 312 33.7
Thhalv10028344m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.6e-40 170.2 329 35.9
Atru.chr13.2474 Acer truncatum HOM05D005324 ORTHO05D001185 9.1e-38 161.8 155 55.5
ECA248G1715 Erigeron canadensis HOM05D005324 ORTHO05D001185 2.0e-37 160.6 277 35.4
AL6G41750 Arabidopsis lyrata HOM05D003376 ORTHO05D000002 5.9e-37 159.1 290 34.8
HanXRQChr09g0262551 Helianthus annuus HOM05D003376 ORTHO05D001185 8.5e-36 155.2 211 37.9
Lj2g0023412 Lotus japonicus HOM05D005324 ORTHO05D018017 1.1e-35 154.8 129 50.4
Thhalv10027218m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.6e-34 149.8 307 33.9
Cc00_g17730 Coffea canephora HOM05D003326 ORTHO05D001185 1.0e-33 148.3 214 37.4
Thhalv10000705m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.5e-32 144.4 325 30.5
PGSC0003DMG400042319 Solanum tuberosum HOM05D019581 ORTHO05D018017 2.0e-32 144.1 204 34.3
Ca_19239_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.6e-32 143.7 310 29.0
Glyma.11G180400 Glycine max HOM05D005324 ORTHO05D001185 1.2e-29 134.8 318 29.2
Thhalv10001272m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.5e-29 132.9 200 36.0
C07p27990 Brassica napus HOM05D003376 ORTHO05D001185 5.9e-29 132.5 303 31.0
BolC1t03802H Brassica oleracea HOM05D003376 ORTHO05D001185 2.2e-28 130.6 281 32.4
AL88U10010 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 8.5e-28 128.6 263 31.6
AL6G37690 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.6e-26 124.4 258 32.9
Atru.chr11.502 Acer truncatum HOM05D005324 ORTHO05D001185 3.6e-26 123.2 113 54.9
Thecc.07G158200 Theobroma cacao HOM05D005324 ORTHO05D001185 1.0e-25 121.7 179 36.9
BcaB05g22490 Brassica carinata HOM05D003376 ORTHO05D001185 2.3e-25 120.6 170 38.2
arahy.Tifrunner.gnm1.ann1.BZ6XIA Arachis hypogaea HOM05D003326 ORTHO05D000002 8.8e-25 118.6 101 50.5
Ca_24087_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.2e-24 118.2 101 51.5
Glyma.19G076000 Glycine max HOM05D005324 ORTHO05D001185 5.7e-24 115.9 185 34.1
Atru.chr11.226 Acer truncatum HOM05D005324 ORTHO05D001185 1.8e-22 110.9 59 79.7
Thhalv10002230m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.1e-22 110.2 241 34.0
Atru.chr1.2263 Acer truncatum HOM05D005324 ORTHO05D001185 3.5e-21 106.7 57 80.7
A05p12450 Brassica napus HOM05D003376 ORTHO05D001185 3.5e-21 106.7 216 32.4
A09p27420 Brassica napus HOM05D003376 ORTHO05D001185 3.5e-21 106.7 216 32.4
Atru.chr4.2110 Acer truncatum HOM05D005324 ORTHO05D001185 4.7e-18 96.3 86 52.3
Ca_00995_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.7e-18 96.3 150 36.0
Atru.chr9.596 Acer truncatum HOM05D005324 ORTHO05D001185 1.0e-17 95.1 71 69.0
Ca_20262_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 8.9e-17 92.0 168 32.7
COL.COLO4_27206 Corchorus olitorius HOM05D003326 ORTHO05D001185 9.8e-16 88.6 105 37.1
Lj6g0018849 Lotus japonicus HOM05D005324 ORTHO05D001185 9.8e-16 88.6 309 24.6
Lj1g0026229 Lotus japonicus HOM05D005324 ORTHO05D001185 1.3e-15 88.2 214 31.3
TAR633G1644 Trochodendron aralioides HOM05D005152 ORTHO05D006162 2.0e-13 80.9 214 27.1
Ca_19340_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.3e-12 78.2 165 32.1
Ca_28515_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.0e-12 77.0 72 48.6
MBI14_g23481_MAGBIO Magnolia biondii HOM05D005324 ORTHO05D001185 6.6e-12 75.9 147 32.0
Cc00_g28290 Coffea canephora HOM05D003326 ORTHO05D001185 3.3e-11 73.6 140 32.9
Ca_29877_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 9.5e-11 72.0 134 33.6
Ca_04090_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.8e-10 70.5 74 40.5
Ca_05166_v3 Cicer arietinum L. HOM05D005324 ORTHO05D000002 6.2e-10 69.3 42 69.0
Ca_15184_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.2e-08 65.1 74 39.2
Duzib187G1529 Durio zibethinus HOM05D005324 ORTHO05D001185 5.8e-08 62.8 86 33.7
PGSC0003DMG400040410 Solanum tuberosum HOM05D016590 ORTHO05D018017 5.8e-08 62.8 126 26.2
BraA09t38519Z Brassica rapa HOM05D003376 ORTHO05D001185 7.5e-08 62.4 60 46.7
Ca_05672_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 7.5e-08 62.4 129 31.8
C01p15920 Brassica napus HOM05D003376 ORTHO05D001185 9.8e-08 62.0 60 48.3
A01p13220 Brassica napus HOM05D003376 ORTHO05D001185 1.3e-07 61.6 60 48.3
A01p13240 Brassica napus HOM05D003376 ORTHO05D001185 1.3e-07 61.6 60 48.3
CAN.G505.24 Capsicum annuum HOM05D005324 ORTHO05D001185 1.7e-07 61.2 45 60.0
C07p11800 Brassica napus HOM05D003376 ORTHO05D001185 2.2e-07 60.8 78 37.2
BraA06t26272Z Brassica rapa HOM05D003376 ORTHO05D001185 2.9e-07 60.5 93 34.4
BolC1t01546H Brassica oleracea HOM05D003376 ORTHO05D001185 6.4e-07 59.3 60 46.7
BraA05t20180Z Brassica rapa HOM05D003376 ORTHO05D001185 6.4e-07 59.3 60 45.0
A06p25220 Brassica napus HOM05D003376 ORTHO05D001185 8.3e-07 58.9 73 41.1
C03p79090 Brassica napus HOM05D003376 ORTHO05D001185 1.9e-06 57.8 78 34.6
BraA01t01266Z Brassica rapa HOM05D003376 ORTHO05D001185 1.9e-06 57.8 60 46.7
C04p09000 Brassica napus HOM05D003376 ORTHO05D001185 4.1e-06 56.6 147 29.9


User provided reference genes

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