Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 3.5e-112 408.3 206 100.0
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.4e-89 333.2 206 84.0
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 4.2e-89 331.6 206 83.0
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.1e-88 329.3 206 80.6
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 2.7e-88 328.9 205 82.0
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 4.6e-88 328.2 206 82.5
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 3.0e-87 325.5 206 82.0
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 3.0e-87 325.5 206 82.0
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 3.0e-87 325.5 206 81.6
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 3.0e-87 325.5 203 82.8
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 6.7e-87 324.3 205 80.5
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 6.7e-87 324.3 206 81.6
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 8.7e-87 323.9 205 80.5
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 8.7e-87 323.9 206 79.6
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 1.1e-86 323.6 206 80.1
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 1.1e-86 323.6 206 81.1
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 3.3e-86 322.0 203 81.3
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 5.6e-86 321.2 189 85.2
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 1.3e-85 320.1 206 80.1
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 2.1e-85 319.3 198 81.3
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.8e-85 318.9 205 80.5
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 3.7e-85 318.5 190 85.3
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 4.8e-85 318.2 206 79.6
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 4.8e-85 318.2 206 79.6
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 1.8e-84 316.2 206 78.6
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 3.1e-84 315.5 207 79.7
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 4.0e-84 315.1 205 80.0
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 4.0e-84 315.1 206 79.6
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 4.0e-84 315.1 205 80.5
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 5.3e-84 314.7 199 80.9
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 5.3e-84 314.7 206 79.6
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 9.0e-84 313.9 206 77.2
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.5e-83 313.2 206 75.7
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 2.0e-83 312.8 222 75.2
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 2.0e-83 312.8 207 77.8
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 2.6e-83 312.4 206 77.7
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 4.5e-83 311.6 186 83.9
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 5.8e-83 311.2 207 77.3
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 5.8e-83 311.2 203 79.3
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 5.8e-83 311.2 206 78.6
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 5.8e-83 311.2 186 84.9
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 7.6e-83 310.8 207 77.8
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 2.2e-82 309.3 205 78.5
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 4.9e-82 308.1 207 77.3
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 4.9e-82 308.1 206 75.7
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 8.4e-82 307.4 206 75.2
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 1.1e-81 307.0 206 76.2
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 2.5e-81 305.8 206 75.7
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 2.5e-81 305.8 206 76.2
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 4.2e-81 305.1 206 75.2
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 4.2e-81 305.1 206 75.2
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 4.2e-81 305.1 206 75.2
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 4.2e-81 305.1 206 75.2
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 9.3e-81 303.9 206 74.8
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 1.2e-80 303.5 206 76.2
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 1.6e-80 303.1 202 74.8
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.6e-80 303.1 206 75.7
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.6e-80 303.1 206 76.2
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 1.6e-80 303.1 202 78.2
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 2.1e-80 302.8 187 80.2
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.7e-80 302.4 206 76.2
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.7e-80 302.4 206 76.2
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 2.7e-80 302.4 205 77.6
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 4.6e-80 301.6 206 74.3
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 6.0e-80 301.2 203 73.9
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.0e-79 300.4 206 74.8
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 1.0e-79 300.4 200 77.0
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 1.0e-79 300.4 205 74.6
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.3e-79 300.1 206 75.7
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 1.3e-79 300.1 206 76.2
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.8e-79 299.7 206 73.8
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.8e-79 299.7 187 79.7
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 2.3e-79 299.3 186 80.6
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 6.7e-79 297.7 206 73.8
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.1e-78 297.0 198 75.3
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 4.3e-78 295.0 206 73.8
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 1.6e-77 293.1 192 78.6
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 3.7e-77 292.0 197 75.1
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 8.2e-77 290.8 206 73.8
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 1.1e-76 290.4 199 74.4
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 5.3e-76 288.1 206 72.8
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 5.3e-76 288.1 206 72.8
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 6.9e-76 287.7 187 78.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 6.9e-76 287.7 206 72.8
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.5e-75 286.6 202 73.8
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.0e-75 286.2 194 75.8
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.6e-75 285.8 205 74.1
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 2.6e-75 285.8 230 66.5
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.7e-74 283.1 227 68.3
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.1e-73 280.4 227 67.4
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 7.2e-73 277.7 205 68.8
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 2.1e-72 276.2 206 68.9
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 1.0e-71 273.9 168 79.8
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.1e-70 270.4 317 51.4
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.3e-69 266.9 202 68.8
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 4.8e-69 265.0 193 68.9
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 4.5e-67 258.5 237 59.5
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 5.0e-66 255.0 161 80.7
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 3.6e-64 248.8 208 63.9
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 1.0e-63 247.3 168 74.4
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.7e-58 229.9 158 72.8
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 1.0e-55 220.7 132 81.1
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 2.8e-53 212.6 115 92.2
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 3.1e-52 209.1 135 77.8
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.2e-50 203.0 135 75.6
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 7.2e-49 198.0 106 89.6
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 2.7e-48 196.1 114 86.8
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 6.1e-48 194.9 134 75.4
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 8.8e-47 191.0 152 64.5
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 4.4e-46 188.7 115 80.0
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 2.2e-42 176.4 108 82.4
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.8e-37 158.7 148 58.8
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 3.5e-35 152.5 198 50.5
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 2.3e-34 149.8 186 45.7
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 6.1e-32 141.7 93 74.2
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 6.8e-31 138.3 180 40.0
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 3.5e-27 125.9 189 43.4
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-26 124.0 135 51.1
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 5.0e-26 122.1 138 46.4
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 3.3e-25 119.4 208 38.0
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 2.8e-24 116.3 247 32.8
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.6e-11 73.9 168 31.5
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 1.2e-08 64.3 91 39.6
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.2e-07 58.9 49 63.3
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 8.9e-07 58.2 31 83.9
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 8.9e-07 58.2 33 84.8
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 2.0e-06 57.0 34 73.5


User provided reference genes

Program Settings