Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 3.3e-40 167.9 86 100.0
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 6.1e-34 147.1 83 88.0
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 6.1e-34 147.1 83 88.0
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 8.8e-33 143.3 80 87.5
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 8.8e-33 143.3 80 87.5
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 8.8e-33 143.3 80 87.5
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 8.8e-33 143.3 83 85.5
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 2.0e-32 142.1 80 86.2
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.6e-32 141.7 83 83.1
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.6e-32 141.7 83 83.1
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.3e-32 141.4 80 85.0
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 4.4e-32 141.0 86 81.4
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 4.4e-32 141.0 83 84.3
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 4.4e-32 141.0 83 84.3
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 4.4e-32 141.0 83 84.3
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 7.4e-32 140.2 80 86.2
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 9.7e-32 139.8 83 81.9
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 1.3e-31 139.4 83 84.3
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 1.7e-31 139.0 80 83.8
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 1.7e-31 139.0 80 83.8
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 1.7e-31 139.0 80 83.8
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 1.7e-31 139.0 80 83.8
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 1.7e-31 139.0 80 83.8
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.7e-31 139.0 83 81.9
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 1.7e-31 139.0 82 82.9
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.2e-31 138.7 80 86.2
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 2.8e-31 138.3 83 81.9
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 3.7e-31 137.9 83 83.1
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 4.8e-31 137.5 80 82.5
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 4.8e-31 137.5 83 80.7
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 6.3e-31 137.1 83 79.5
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 8.2e-31 136.7 83 79.5
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 8.2e-31 136.7 83 79.5
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 1.8e-30 135.6 76 85.5
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 2.4e-30 135.2 86 77.9
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.4e-30 135.2 86 77.9
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.4e-30 135.2 86 77.9
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.4e-30 135.2 86 77.9
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 2.4e-30 135.2 80 81.2
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.1e-30 134.4 83 79.5
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.1e-30 134.4 83 79.5
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 9.1e-30 133.3 78 82.1
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.6e-29 132.5 83 79.5
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 2.6e-29 131.7 83 77.1
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 2.6e-29 131.7 83 77.1
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 4.5e-29 131.0 83 78.3
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 7.7e-29 130.2 83 75.9
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.7e-28 129.0 80 76.2
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 2.2e-28 128.6 83 75.9
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 2.9e-28 128.3 79 82.3
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 3.8e-28 127.9 77 81.8
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.8e-28 127.9 81 76.5
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 5.0e-28 127.5 79 83.5
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 6.5e-28 127.1 73 86.3
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 8.5e-28 126.7 80 77.5
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.5e-27 125.9 77 83.1
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.5e-27 125.9 95 69.5
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 1.5e-27 125.9 73 84.9
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 1.9e-27 125.6 76 84.2
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 2.5e-27 125.2 77 81.8
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 2.5e-27 125.2 76 82.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 2.5e-27 125.2 79 78.5
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 4.2e-27 124.4 79 79.7
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 4.2e-27 124.4 76 82.9
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 5.5e-27 124.0 80 77.5
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 9.4e-27 123.2 80 72.5
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.6e-26 122.5 79 78.5
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 2.7e-26 121.7 80 77.5
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 2.7e-26 121.7 80 77.5
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 3.6e-26 121.3 77 74.0
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 3.6e-26 121.3 77 80.5
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 6.1e-26 120.6 83 77.1
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 1.0e-25 119.8 76 78.9
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 1.8e-25 119.0 79 77.2
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 2.3e-25 118.6 77 75.3
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 2.3e-25 118.6 69 82.6
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 8.8e-25 116.7 71 83.1
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.2e-24 116.3 72 77.8
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 1.2e-24 116.3 72 81.9
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 2.6e-24 115.2 72 76.4
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 5.7e-24 114.0 79 73.4
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.7e-24 114.0 80 72.5
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.7e-24 114.0 80 72.5
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 9.7e-24 113.2 76 71.1
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.7e-23 112.5 63 87.3
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.7e-23 112.5 99 64.6
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 2.2e-23 112.1 76 75.0
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 2.2e-23 112.1 83 69.9
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 8.3e-23 110.2 68 80.9
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 8.3e-23 110.2 76 69.7
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 1.8e-22 109.0 68 80.9
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.8e-22 109.0 155 43.2
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 2.4e-22 108.6 65 83.1
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 4.1e-22 107.8 76 69.7
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 7.0e-22 107.1 67 82.1
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.2e-21 106.3 77 67.5
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 2.0e-21 105.5 68 77.9
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 3.5e-21 104.8 77 66.2
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 7.7e-21 103.6 76 65.8
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.0e-20 103.2 67 77.6
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 2.2e-20 102.1 96 60.4
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.5e-19 99.4 58 82.8
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 3.2e-19 98.2 58 82.8
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 7.2e-19 97.1 64 75.0
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.0e-17 93.2 63 76.2
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.3e-17 92.0 67 65.7
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 4.0e-17 91.3 74 62.2
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.2e-16 89.7 60 75.0
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 3.4e-16 88.2 121 44.6
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.7e-15 85.9 52 82.7
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 2.2e-15 85.5 52 82.7
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 2.8e-15 85.1 65 66.2
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 3.7e-15 84.7 154 38.3
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.0e-13 79.0 69 60.9
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.7e-12 75.9 54 72.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 2.3e-12 75.5 71 53.5
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.9e-12 75.1 54 72.2
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.5e-11 72.8 77 49.4
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.9e-11 72.4 62 62.9
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 5.5e-11 70.9 62 62.9
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 4.4e-08 61.2 38 84.2
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.7e-07 59.3 35 82.9
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.8e-06 55.8 57 52.6
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 4.1e-06 54.7 54 59.3


User provided reference genes

Program Settings