Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.2389 Acer truncatum HOM05D000359 ORTHO05D004175 1.2e-53 213.0 114 100.0
Ciclev10024018m.g Citrus clementina HOM05D000359 ORTHO05D000251 5.8e-24 114.4 90 68.9
FvH4_5g16231 Fragaria vesca HOM05D000359 ORTHO05D000251 2.8e-18 95.5 112 49.1
FAN08G3539 Fragaria x ananassa HOM05D000359 ORTHO05D000251 2.8e-18 95.5 112 50.0
FAN18G1850 Fragaria x ananassa HOM05D000359 ORTHO05D000251 2.8e-18 95.5 112 49.1
FAN13G0394 Fragaria x ananassa HOM05D000359 ORTHO05D000251 1.1e-17 93.6 112 49.1
QL10p013708 Quercus lobata HOM05D000359 ORTHO05D000251 1.8e-17 92.8 72 56.9
RcHm_v2.0_Chr7g0179861 Rosa chinensis HOM05D000359 ORTHO05D000251 3.1e-17 92.0 111 48.6
FAN04G2233 Fragaria x ananassa HOM05D000359 ORTHO05D000251 5.3e-17 91.3 111 48.6
Actinidia19073 Actinidia chinensis HOM05D000359 ORTHO05D000251 6.9e-17 90.9 107 46.7
Prupe.5G180600 Prunus persica HOM05D000359 ORTHO05D000251 1.2e-16 90.1 110 45.5
Haze_07426 Corylus avellana HOM05D000359 ORTHO05D000251 5.8e-16 87.8 63 61.9
MD14G1188500 Malus domestica HOM05D000359 ORTHO05D000251 9.9e-16 87.0 97 47.4
Cfa019058 Carpinus fangiana HOM05D000359 ORTHO05D000251 2.9e-15 85.5 58 65.5
GSVIVG01007836001 Vitis vinifera HOM05D000359 ORTHO05D001451 2.9e-15 85.5 103 47.6
TWI60G0802 Tripterygium wilfordii HOM05D000359 ORTHO05D000251 3.8e-15 85.1 107 44.9
CSS0003753 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 1.9e-14 82.8 100 42.0
CSS0042814 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 1.9e-14 82.8 109 46.8
CSS0043050 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 1.9e-14 82.8 109 46.8
Duzib205G1037 Durio zibethinus HOM05D000359 ORTHO05D000251 1.6e-13 79.7 77 50.6
Lj1g0022920 Lotus japonicus HOM05D000359 ORTHO05D000251 1.8e-12 76.3 103 44.7
Thecc.03G002400 Theobroma cacao HOM05D000359 ORTHO05D000251 2.3e-12 75.9 71 56.3
Manes.14G071400 Manihot esculenta HOM05D000359 ORTHO05D000251 3.0e-12 75.5 86 47.7
Cpa.g.sc35.22 Carica papaya HOM05D000359 ORTHO05D000251 3.9e-12 75.1 107 39.3
vmacro19351 Vaccinium macrocarpon HOM05D000359 ORTHO05D000251 5.1e-12 74.7 99 43.4
Ciclev10030750m.g Citrus clementina HOM05D000359 ORTHO05D000251 1.5e-11 73.2 106 40.6
Gohir.D04G000900 Gossypium hirsutum HOM05D000359 ORTHO05D000251 2.5e-11 72.4 66 56.1
Gorai.012G001900 Gossypium raimondii HOM05D000359 ORTHO05D000251 2.5e-11 72.4 66 56.1
CiPaw.11G033000 Carya illinoinensis HOM05D000359 ORTHO05D000251 4.3e-11 71.6 109 39.4
Gohir.A05G415300 Gossypium hirsutum HOM05D000359 ORTHO05D000251 1.6e-10 69.7 66 57.6
TAR622G0545 Trochodendron aralioides HOM05D000359 ORTHO05D000251 2.8e-10 68.9 113 42.5
CANSAT80G1549 Cannabis sativa HOM05D000359 ORTHO05D000251 6.2e-10 67.8 80 47.5
Ca_16217_v3 Cicer arietinum L. HOM05D000938 ORTHO05D001451 6.2e-10 67.8 105 36.2
Lj9A455T52 Lonicera japonica HOM05D000359 ORTHO05D000251 1.4e-09 66.6 104 44.2
PGR083G1103 Punica granatum HOM05D000359 ORTHO05D000251 2.4e-09 65.9 103 36.9
GSVIVG01011372001 Vitis vinifera HOM05D000359 ORTHO05D000251 2.4e-09 65.9 114 38.6
COL.COLO4_36281 Corchorus olitorius HOM05D000359 ORTHO05D000251 3.1e-09 65.5 112 37.5
Duzib268G0808 Durio zibethinus HOM05D000359 ORTHO05D000251 3.1e-09 65.5 106 37.7
Rhsim08G0167200 Rhododendron simsii HOM05D000359 ORTHO05D000251 5.3e-09 64.7 102 42.2
Thecc.02G239400 Theobroma cacao HOM05D000359 ORTHO05D000251 5.3e-09 64.7 99 39.4
Nn4g22942 Nelumbo nucifera HOM05D000359 ORTHO05D000251 6.9e-09 64.3 103 42.7
Medtr8g062830 Medicago truncatula HOM05D000359 ORTHO05D000251 9.0e-09 63.9 118 39.0
Phvul.009G182900 Phaseolus vulgaris HOM05D000359 ORTHO05D000251 1.2e-08 63.5 109 40.4
QL06p049632 Quercus lobata HOM05D003637 ORTHO05D004175 1.2e-08 63.5 49 59.2
TPR.G29736 Trifolium pratense HOM05D000359 ORTHO05D000251 1.2e-08 63.5 113 38.1
DCAR_032304 Daucus carota HOM05D000359 ORTHO05D000251 2.0e-08 62.8 110 38.2
Atru.chr11.1933 Acer truncatum HOM05D000359 ORTHO05D000251 3.4e-08 62.0 116 40.5
Oeu018522.3 Olea europaea HOM05D000359 ORTHO05D000251 4.5e-08 61.6 109 35.8
Solyc03g113710.4 Solanum lycopersicum HOM05D000359 ORTHO05D000251 5.8e-08 61.2 76 44.7
Glyma.06G187100 Glycine max HOM05D000359 ORTHO05D000251 1.7e-07 59.7 110 38.2
Medtr3g078623 Medicago truncatula HOM05D000359 ORTHO05D000251 1.7e-07 59.7 101 34.7
Phvul.003G056100 Phaseolus vulgaris HOM05D000359 ORTHO05D000251 1.7e-07 59.7 113 36.3
GSVIVG01020145001 Vitis vinifera HOM05D000359 ORTHO05D000251 1.7e-07 59.7 87 40.2
MSTRG.7856 Avicennia marina HOM05D000359 ORTHO05D000251 2.2e-07 59.3 109 37.6
Duzib251G0611 Durio zibethinus HOM05D000359 ORTHO05D000251 2.2e-07 59.3 73 39.7
SalBow5G0231 Salvia bowleyana HOM05D000359 ORTHO05D000251 2.2e-07 59.3 111 35.1
SalBow5G5144 Salvia bowleyana HOM05D000359 ORTHO05D000251 2.2e-07 59.3 111 35.1
CAN.G853.30 Capsicum annuum HOM05D000359 ORTHO05D000251 2.9e-07 58.9 85 41.2
VMungo0251G3063 Vigna mungo HOM05D000359 ORTHO05D000251 2.9e-07 58.9 113 38.9
MSTRG.23073 Avicennia marina HOM05D000359 ORTHO05D000251 3.8e-07 58.5 106 33.0
Dinv13128 Davidia involucrata HOM05D000359 ORTHO05D000251 3.8e-07 58.5 54 51.9
Prupe.1G261700 Prunus persica HOM05D000359 ORTHO05D000251 3.8e-07 58.5 115 34.8
Nitab4.5_0003694g0050 Nicotiana tabacum HOM05D000359 ORTHO05D000251 4.9e-07 58.2 75 41.3
Peaxi162Scf00017g02231 Petunia axillaris HOM05D000359 ORTHO05D000251 4.9e-07 58.2 77 41.6
TWI75G0837 Tripterygium wilfordii HOM05D000359 ORTHO05D000251 4.9e-07 58.2 114 41.2
Haze_12121 Corylus avellana HOM05D000359 ORTHO05D000251 8.4e-07 57.4 101 38.6
vmacro22658 Vaccinium macrocarpon HOM05D000359 ORTHO05D000251 8.4e-07 57.4 101 32.7
VMungo1309G3144 Vigna mungo HOM05D000359 ORTHO05D000251 1.1e-06 57.0 109 37.6
Migut.I00097 Erythranthe guttata HOM05D000359 ORTHO05D000251 1.4e-06 56.6 109 33.9
CSS0011283 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 1.9e-06 56.2 63 42.9
QL03p067368 Quercus lobata HOM05D000359 ORTHO05D000251 1.9e-06 56.2 110 37.3
Potri.010G037900 Populus trichocarpa HOM05D000359 ORTHO05D000251 2.4e-06 55.8 101 36.6
HanXRQChr09g0271641 Helianthus annuus HOM05D000359 ORTHO05D000251 3.2e-06 55.5 96 37.5
Nitab4.5_0000642g0260 Nicotiana tabacum HOM05D000359 ORTHO05D000251 3.2e-06 55.5 78 38.5
Sopen03g032760 Solanum pennellii HOM05D000359 ORTHO05D000251 3.2e-06 55.5 77 42.9
Lj4g0015951 Lotus japonicus HOM05D000359 ORTHO05D000251 4.2e-06 55.1 117 33.3
Psat0s2917g0120 Pisum sativum HOM05D000359 ORTHO05D000251 4.2e-06 55.1 102 33.3
Actinidia14995 Actinidia chinensis HOM05D000359 ORTHO05D000251 5.5e-06 54.7 93 35.5
Peaxi162Scf00828g00002 Petunia axillaris HOM05D000359 ORTHO05D000251 7.1e-06 54.3 101 34.7


User provided reference genes

Program Settings