Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.2147 Acer truncatum HOM05D006627 ORTHO05D007753 0.0e+00 1770.0 919 100.0
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 1.2e-135 488.4 1101 35.5
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 5.5e-133 479.6 1101 34.9
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 2.9e-126 457.2 1099 34.8
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 2.3e-115 421.0 1147 33.6
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.1e-91 342.4 1036 31.6
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.7e-87 327.8 1146 30.6
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.9e-85 321.6 1054 29.7
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 1.2e-84 318.9 915 33.8
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.3e-78 298.1 899 31.8
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 3.6e-76 290.8 697 35.2
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 1.6e-71 275.4 972 29.5
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 1.3e-68 265.8 677 33.4
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.9e-65 254.6 1154 26.9
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 5.8e-58 230.3 715 32.7
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 1.8e-51 208.8 1037 27.5
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.4e-48 199.1 1052 25.8
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 4.2e-48 197.6 1051 25.7
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 1.5e-45 189.1 984 28.0
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 2.8e-44 184.9 648 29.5
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 2.4e-43 181.8 612 30.7
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 1.2e-42 179.5 968 26.5
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 5.9e-42 177.2 956 25.8
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 6.5e-41 173.7 955 26.2
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 6.5e-41 173.7 1103 25.4
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 1.6e-39 169.1 693 31.2
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 4.7e-39 167.5 989 26.4
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 2.8e-36 158.3 880 25.7
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 1.8e-35 155.6 953 26.2
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 2.9e-33 148.3 910 27.4
ECA233G3260 Erigeron canadensis HOM05D001089 ORTHO05D000920 1.2e-31 142.9 598 30.3
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 6.7e-30 137.1 1200 22.7
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.9e-24 119.0 1023 26.3
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 1.2e-23 116.3 633 28.1
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 1.2e-21 109.8 1036 23.1
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 5.7e-21 107.5 1038 24.4
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 9.7e-21 106.7 655 26.3
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 1.3e-20 106.3 615 27.0
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 1.7e-20 105.9 969 23.3
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 4.1e-19 101.3 1021 24.4
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 2.2e-17 95.5 751 24.1
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 2.2e-17 95.5 751 24.1
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 6.5e-17 94.0 638 26.5
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.1e-16 93.2 937 23.8
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.2e-16 91.3 635 26.3
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.5e-16 90.9 1030 23.5
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 1.2e-15 89.7 1029 23.4
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 2.1e-15 89.0 996 23.5
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 3.6e-15 88.2 633 26.1
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.0e-15 87.0 641 26.7
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 1.0e-14 86.7 608 28.0
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.8e-14 85.9 638 26.3
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 6.8e-14 84.0 595 26.1
HanXRQChr17g0533291 Helianthus annuus HOM05D006627 ORTHO05D007753 8.8e-14 83.6 819 24.1
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 1.2e-13 83.2 985 24.1
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 2.0e-13 82.4 702 25.5
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 2.0e-13 82.4 593 26.3
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 7.5e-13 80.5 665 26.5
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 1.3e-12 79.7 588 27.2
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.3e-12 79.7 1029 23.1
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 1.3e-12 79.7 949 22.4
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 4.8e-12 77.8 970 24.4
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 6.3e-12 77.4 947 22.6
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 8.3e-12 77.0 955 22.2
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 1.1e-11 76.6 922 24.1
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 1.1e-11 76.6 641 27.8
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 4.1e-11 74.7 877 24.3
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 5.4e-11 74.3 612 25.3
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.5e-10 71.6 159 34.6
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 7.7e-10 70.5 128 34.4
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 1.3e-09 69.7 431 27.1
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 8.6e-09 67.0 607 24.7
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.5e-08 66.2 974 22.4
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 5.5e-08 64.3 1013 23.5
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 1.6e-07 62.8 589 25.3
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.8e-07 62.0 949 22.6
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 1.4e-06 59.7 613 24.0


User provided reference genes

Program Settings