Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.4e-47 191.8 97 100.0
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.7e-37 159.1 97 81.4
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 3.9e-37 157.9 90 86.7
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 6.6e-37 157.1 94 81.9
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 8.7e-37 156.8 97 80.4
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.5e-36 155.2 93 81.7
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.3e-36 154.5 97 78.4
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.3e-36 154.5 97 78.4
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 4.3e-36 154.5 97 80.4
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 4.3e-36 154.5 97 80.4
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.3e-35 152.9 97 80.4
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.3e-35 152.9 97 80.4
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.3e-35 152.9 97 80.4
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.1e-35 152.1 97 80.4
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.6e-35 151.4 95 80.0
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 3.6e-35 151.4 95 80.0
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 4.8e-35 151.0 97 77.3
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 6.2e-35 150.6 94 79.8
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 8.1e-35 150.2 94 78.7
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.4e-34 149.4 95 78.9
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.4e-34 149.4 97 75.3
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.0e-34 147.9 95 76.8
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.0e-34 147.9 94 77.7
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 6.9e-34 147.1 95 76.8
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.5e-33 146.0 92 76.1
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.0e-33 145.6 90 77.8
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 2.0e-33 145.6 88 81.8
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.6e-33 145.2 97 76.3
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 2.6e-33 145.2 97 75.3
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.4e-33 144.8 95 75.8
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 4.5e-33 144.4 97 74.2
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 5.8e-33 144.1 88 77.3
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 9.9e-33 143.3 84 83.3
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 9.9e-33 143.3 91 76.9
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 9.9e-33 143.3 91 76.9
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 9.9e-33 143.3 97 75.3
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.3e-32 142.9 95 74.7
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 1.7e-32 142.5 95 74.7
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.2e-32 142.1 90 78.9
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 2.9e-32 141.7 94 74.5
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 3.8e-32 141.4 94 73.4
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 3.8e-32 141.4 97 73.2
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 6.4e-32 140.6 93 76.3
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 8.4e-32 140.2 92 73.9
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 8.4e-32 140.2 91 73.6
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.1e-31 139.8 92 71.7
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.4e-31 139.4 91 74.7
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.4e-31 138.7 91 74.7
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 2.4e-31 138.7 91 75.8
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 3.2e-31 138.3 94 72.3
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 4.2e-31 137.9 94 72.3
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 4.2e-31 137.9 93 74.2
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 7.1e-31 137.1 86 74.4
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 7.1e-31 137.1 95 70.5
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 9.3e-31 136.7 95 69.5
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 1.6e-30 136.0 93 73.1
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.6e-30 136.0 94 71.3
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.6e-30 136.0 98 70.4
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 2.1e-30 135.6 96 70.8
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 2.1e-30 135.6 97 69.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 3.5e-30 134.8 92 72.8
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.5e-30 134.8 92 72.8
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.5e-30 134.8 92 72.8
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.6e-30 134.4 88 75.0
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 4.6e-30 134.4 89 73.0
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 4.6e-30 134.4 89 73.0
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 6.0e-30 134.0 95 69.5
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 6.0e-30 134.0 95 69.5
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.0e-29 133.3 91 70.3
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 1.3e-29 132.9 95 67.4
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.3e-29 132.9 91 70.3
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 3.9e-29 131.3 97 66.0
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 5.1e-29 131.0 93 71.0
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 2.5e-28 128.6 89 70.8
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 5.6e-28 127.5 88 69.3
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 9.6e-28 126.7 89 68.5
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 1.3e-27 126.3 94 67.0
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 1.4e-26 122.9 87 67.8
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 2.4e-26 122.1 87 65.5
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 3.1e-26 121.7 93 63.4
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 5.3e-26 120.9 92 60.9
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 5.3e-26 120.9 92 60.9
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 5.3e-26 120.9 92 60.9
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 5.3e-26 120.9 92 60.9
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.3e-26 120.9 120 55.8
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 2.0e-25 119.0 87 66.7
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 4.5e-25 117.9 97 61.9
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 4.5e-25 117.9 93 60.2
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 5.8e-25 117.5 74 77.0
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 7.6e-25 117.1 74 81.1
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 9.9e-25 116.7 69 78.3
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 9.9e-25 116.7 93 59.1
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.7e-24 115.9 69 76.8
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 1.7e-24 115.9 91 65.9
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 2.9e-24 115.2 91 61.5
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.8e-24 114.8 69 84.1
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 1.4e-23 112.8 89 62.9
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 2.4e-23 112.1 86 67.4
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 2.4e-23 112.1 89 65.2
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.5e-23 110.9 69 76.8
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 3.5e-22 108.2 82 63.4
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 3.5e-22 108.2 78 69.2
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 8.7e-21 103.6 82 63.4
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 6.2e-19 97.4 93 49.5
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 1.8e-18 95.9 67 74.6
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.3e-16 89.7 92 53.3
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 3.5e-14 81.6 67 59.7
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.3e-13 79.7 50 78.0
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 2.2e-08 62.4 103 40.8
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 8.5e-08 60.5 91 40.7
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 1.4e-07 59.7 103 37.9
Dinv13936 Davidia involucrata HOM05D000015 ORTHO05D009146 2.5e-07 58.9 96 41.7
Manes.17G027600 Manihot esculenta HOM05D000015 ORTHO05D009146 5.5e-07 57.8 79 43.0
Rhsim13G0150400 Rhododendron simsii HOM05D000015 ORTHO05D009146 5.5e-07 57.8 97 40.2
DCAR_028343 Daucus carota HOM05D000015 ORTHO05D009146 9.3e-07 57.0 88 38.6
Lj1A1236G69 Lonicera japonica HOM05D000015 ORTHO05D009146 1.2e-06 56.6 77 41.6
QL03p004924 Quercus lobata HOM05D000015 ORTHO05D009146 1.2e-06 56.6 96 39.6
QL05p071991 Quercus lobata HOM05D000015 ORTHO05D009146 1.2e-06 56.6 96 39.6
HanXRQChr15g0470561 Helianthus annuus HOM05D000015 ORTHO05D009146 1.6e-06 56.2 75 44.0
Medtr4g132620 Medicago truncatula HOM05D000015 ORTHO05D009146 1.6e-06 56.2 68 51.5
CDE06G1972 Ceratophyllum demersum HOM05D000015 ORTHO05D003525 2.1e-06 55.8 60 46.7
MD10G1326200 Malus domestica HOM05D000015 ORTHO05D009146 2.7e-06 55.5 102 41.2
Sabra11G0008100 Salix brachista HOM05D000015 ORTHO05D009146 2.7e-06 55.5 57 50.9
Nn1g03398 Nelumbo nucifera HOM05D000015 ORTHO05D009146 3.6e-06 55.1 96 38.5
CDE02G0421 Ceratophyllum demersum HOM05D000015 ORTHO05D003525 4.6e-06 54.7 59 45.8
Cpa.g.sc152.53 Carica papaya HOM05D000015 ORTHO05D009146 6.1e-06 54.3 57 50.9
CiPaw.10G074200 Carya illinoinensis HOM05D000015 ORTHO05D009146 6.1e-06 54.3 97 37.1


User provided reference genes

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