Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 2.2e-99 365.5 175 100.0
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 9.4e-66 253.8 182 69.2
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 3.6e-65 251.9 181 70.7
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 8.0e-65 250.8 184 70.1
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 8.0e-65 250.8 184 70.1
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 7.4e-63 244.2 182 69.2
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 6.3e-62 241.1 180 69.4
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.1e-61 240.4 182 68.7
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.1e-61 240.4 184 66.8
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 9.1e-61 237.3 182 67.0
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 1.2e-60 236.9 182 67.6
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 2.0e-60 236.1 185 67.0
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 7.7e-60 234.2 183 66.7
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 1.0e-59 233.8 181 66.3
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.9e-59 232.3 180 68.3
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 2.9e-59 232.3 176 67.6
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 3.8e-59 231.9 184 66.3
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 8.5e-59 230.7 182 64.8
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.5e-58 229.9 184 67.4
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 3.2e-58 228.8 182 64.3
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 4.2e-58 228.4 180 66.7
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 5.5e-58 228.0 185 64.3
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 5.5e-58 228.0 180 66.1
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 1.2e-57 226.9 184 63.0
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 2.1e-57 226.1 184 64.1
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.7e-57 224.9 185 63.8
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.7e-57 224.9 185 63.8
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 6.1e-57 224.6 174 64.9
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 6.1e-57 224.6 177 66.7
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 6.1e-57 224.6 182 62.6
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 1.8e-56 223.0 178 66.9
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 3.0e-56 222.2 178 66.9
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 8.8e-56 220.7 185 64.9
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 2.6e-55 219.2 178 66.9
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 4.4e-55 218.4 178 66.9
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 4.4e-55 218.4 178 66.9
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 5.7e-55 218.0 179 65.4
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 1.3e-54 216.9 185 63.2
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 1.7e-54 216.5 185 62.2
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 3.7e-54 215.3 189 61.4
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 3.7e-54 215.3 180 63.9
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 6.3e-54 214.5 151 70.9
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 8.3e-54 214.2 182 59.3
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 1.1e-53 213.8 181 63.0
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 1.4e-53 213.4 184 62.5
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 1.4e-53 213.4 184 61.4
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 3.1e-53 212.2 173 63.6
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 3.1e-53 212.2 129 81.4
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 9.1e-53 210.7 121 82.6
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 9.1e-53 210.7 148 70.3
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 1.6e-52 209.9 183 60.1
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 3.5e-52 208.8 176 64.8
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 3.5e-52 208.8 171 64.9
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.7e-51 206.5 171 65.5
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 2.9e-51 205.7 177 62.1
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 2.9e-51 205.7 180 62.8
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 5.0e-51 204.9 129 77.5
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 5.0e-51 204.9 129 77.5
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 8.5e-51 204.1 177 60.5
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 1.1e-50 203.8 187 62.0
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 1.1e-50 203.8 189 59.3
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 1.1e-50 203.8 177 62.1
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.5e-50 203.4 186 61.8
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 3.2e-50 202.2 181 59.7
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 7.2e-50 201.1 183 57.9
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 9.4e-50 200.7 175 60.6
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 9.4e-50 200.7 175 60.6
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 9.4e-50 200.7 188 59.0
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.2e-49 200.3 182 57.7
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.2e-49 200.3 176 61.4
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.6e-49 199.9 175 60.0
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 2.1e-49 199.5 181 59.1
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 3.6e-49 198.7 177 62.1
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 3.6e-49 198.7 177 62.1
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 3.6e-49 198.7 178 60.7
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 3.6e-49 198.7 184 59.2
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 4.7e-49 198.4 183 59.0
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 8.0e-49 197.6 180 60.0
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 8.0e-49 197.6 182 58.8
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.0e-48 197.2 111 85.6
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.4e-48 196.8 161 63.4
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.8e-48 196.4 175 58.9
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 2.3e-48 196.1 184 58.2
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 3.0e-48 195.7 183 58.5
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 3.0e-48 195.7 175 58.9
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 3.0e-48 195.7 148 69.6
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 3.4e-47 192.2 175 60.0
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 3.4e-47 192.2 175 57.7
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 4.4e-47 191.8 175 60.0
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 4.4e-47 191.8 175 60.0
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 7.5e-47 191.0 179 59.8
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 7.5e-47 191.0 183 58.5
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.7e-46 189.9 122 76.2
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 2.2e-46 189.5 179 59.8
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 1.8e-45 186.4 137 69.3
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 7.7e-44 181.0 139 65.5
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 1.9e-42 176.4 112 71.4
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.0e-40 170.6 149 61.7
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 3.2e-37 159.1 167 49.1
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 2.3e-35 152.9 130 55.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.1e-34 150.6 178 52.8
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 5.2e-32 141.7 102 64.7
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 1.9e-29 133.3 115 60.9
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 3.3e-26 122.5 124 53.2
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 3.3e-26 122.5 146 45.9
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.8e-23 111.7 176 42.6
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 8.6e-19 97.8 100 45.0
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.5e-18 97.1 85 54.1
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 2.3e-16 89.7 90 47.8
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 2.7e-12 76.3 94 44.7
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 1.7e-11 73.6 182 35.2
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 3.6e-09 65.9 95 43.2
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 3.1e-08 62.8 52 71.2
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 4.4e-07 58.9 45 71.1


User provided reference genes

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