Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 0.0e+00 1119.8 573 100.0
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 3.8e-140 502.7 473 57.3
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 4.7e-130 469.2 671 44.4
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.0e-128 463.8 675 44.3
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 2.6e-125 453.4 701 43.7
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 2.5e-115 420.2 583 47.2
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 8.8e-113 411.8 691 40.7
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 3.5e-109 399.8 475 48.4
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 4.4e-104 382.9 610 40.7
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.3e-103 379.0 619 40.5
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 8.3e-103 378.6 403 54.1
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 1.1e-102 378.3 585 44.4
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 1.8e-102 377.5 399 49.6
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 5.4e-102 375.9 586 43.3
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 2.7e-101 373.6 623 39.8
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 7.8e-101 372.1 401 53.1
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.3e-100 371.3 653 40.1
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-100 370.9 631 38.8
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 1.7e-100 370.9 614 41.7
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 3.8e-100 369.8 370 54.6
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 1.9e-99 367.5 373 50.9
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 9.5e-99 365.2 648 39.5
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 3.6e-98 363.2 608 42.4
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.3e-97 360.5 472 45.6
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 4.0e-97 359.8 541 43.4
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 8.9e-97 358.6 432 48.1
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 3.4e-96 356.7 610 37.9
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 2.4e-94 350.5 598 40.8
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 4.1e-94 349.7 599 39.1
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 5.4e-94 349.4 459 44.7
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 3.9e-92 343.2 475 42.1
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 5.0e-92 342.8 375 51.5
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 2.5e-91 340.5 561 39.9
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 1.2e-90 338.2 516 40.3
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.1e-89 335.1 590 39.3
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 1.2e-88 331.6 377 48.8
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 7.5e-88 328.9 612 35.8
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 5.4e-86 322.8 488 41.2
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 1.2e-85 321.6 600 38.7
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 2.7e-85 320.5 469 42.2
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 7.8e-85 318.9 496 41.3
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 6.6e-84 315.8 455 42.2
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 8.6e-84 315.5 310 54.5
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 1.1e-83 315.1 479 42.0
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 1.2e-82 311.6 469 41.2
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 3.6e-82 310.1 483 39.5
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 6.8e-81 305.8 291 58.1
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 3.7e-79 300.1 394 45.2
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 1.1e-75 288.5 479 40.9
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 3.3e-75 287.0 410 42.4
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 2.4e-73 280.8 466 36.9
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 8.4e-71 272.3 443 39.3
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 1.9e-70 271.2 580 33.4
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-68 264.6 672 31.7
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 4.3e-67 260.0 290 48.3
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.1e-66 257.7 450 35.8
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 6.9e-65 252.7 497 36.0
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 7.1e-62 242.7 404 36.6
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 1.0e-60 238.8 277 48.7
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 3.9e-60 236.9 265 48.7
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.6e-59 233.0 266 48.5
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 1.3e-58 231.9 475 36.2
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.3e-58 231.9 341 41.6
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 4.8e-58 229.9 266 46.6
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 4.8e-58 229.9 289 43.3
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 4.0e-57 226.9 272 47.8
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 6.9e-57 226.1 196 63.3
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.0e-57 225.7 201 57.7
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 5.4e-54 216.5 269 46.5
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 9.3e-54 215.7 269 45.7
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.6e-53 214.9 410 38.3
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.9e-52 210.3 163 67.5
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 2.4e-49 201.1 267 42.3
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.0e-48 198.0 341 35.2
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 3.8e-47 193.7 214 47.2
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.8e-42 177.6 229 44.5
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.7e-42 177.2 172 56.4
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 4.8e-42 176.8 229 45.0
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 8.2e-42 176.0 370 31.4
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-41 175.6 172 56.4
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-41 175.3 163 57.1
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-39 168.7 164 55.5
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 9.3e-38 162.5 134 61.2
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 1.1e-35 155.6 240 39.2
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.6e-34 151.8 139 58.3
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 2.2e-34 151.4 313 36.1
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 2.2e-34 151.4 254 35.8
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 2.4e-33 147.9 271 36.5
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 1.2e-32 145.6 158 51.3
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 7.7e-32 142.9 163 50.9
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 1.3e-31 142.1 276 37.0
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-31 140.2 139 52.5
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-30 138.7 111 60.4
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 9.4e-30 136.0 158 49.4
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 2.1e-29 134.8 322 33.2
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 4.6e-29 133.7 158 48.1
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 6.7e-28 129.8 156 46.8
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.7e-28 129.8 80 77.5
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 8.8e-28 129.4 158 46.8
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 2.0e-27 128.3 158 46.8
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-25 122.1 135 45.9
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 9.1e-25 119.4 149 45.6
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 1.0e-23 115.9 301 30.6
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 6.5e-23 113.2 232 35.8
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 1.6e-21 108.6 157 45.2
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 6.1e-21 106.7 251 29.1
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 1.0e-20 105.9 157 44.6
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 1.4e-20 105.5 164 41.5
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 1.8e-20 105.1 157 44.6
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 5.1e-20 103.6 107 49.5
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.5e-19 102.1 66 66.7
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-19 102.1 72 63.9
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 2.6e-19 101.3 162 40.7
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.6e-16 91.3 100 46.0
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.9e-16 90.1 79 58.2
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 1.7e-15 88.6 221 33.5
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 4.7e-13 80.5 95 45.3
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 1.0e-12 79.3 99 45.5
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 3.0e-12 77.8 52 67.3
Eucgr.H03760 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-07 62.0 55 60.0
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.7e-07 62.0 31 83.9
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 2.2e-07 61.6 213 27.2
Eucgr.E00710 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.8e-07 60.8 69 46.4
Eucgr.E00971 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-07 60.5 68 47.1
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 2.5e-06 58.2 34 67.6
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 3.2e-06 57.8 74 39.2


User provided reference genes

Program Settings