Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1896 Acer truncatum HOM05D007894 ORTHO05D009691 6.4e-151 537.3 265 100.0
COL.COLO4_10790 Corchorus olitorius HOM05D007894 ORTHO05D009691 8.3e-82 307.8 273 59.7
MD14G1125500 Malus domestica HOM05D007894 ORTHO05D009691 1.5e-78 297.0 271 58.3
Thecc.03G221700 Theobroma cacao HOM05D007894 ORTHO05D009691 2.5e-78 296.2 270 58.1
RcHm_v2.0_Chr7g0186841 Rosa chinensis HOM05D007894 ORTHO05D009691 5.2e-76 288.5 270 57.4
RcHm_v2.0_Chr7g0186241 Rosa chinensis HOM05D007894 ORTHO05D009691 1.5e-75 287.0 270 57.0
MD06G1117900 Malus domestica HOM05D007894 ORTHO05D009691 2.0e-75 286.6 266 57.5
Ciclev10021739m.g Citrus clementina HOM05D007894 ORTHO05D009691 5.8e-75 285.0 272 57.4
FvH4_5g10980 Fragaria vesca HOM05D007894 ORTHO05D009691 6.4e-74 281.6 268 56.0
Prupe.5G129000 Prunus persica HOM05D007894 ORTHO05D009691 6.4e-74 281.6 270 54.8
FAN18G0782 Fragaria x ananassa HOM05D007894 ORTHO05D009691 8.3e-74 281.2 268 55.6
FAN13G0186 Fragaria x ananassa HOM05D007894 ORTHO05D009691 1.9e-73 280.0 268 54.9
FAN04G2047 Fragaria x ananassa HOM05D007894 ORTHO05D009691 2.4e-73 279.6 271 55.0
FAN08G2177 Fragaria x ananassa HOM05D007894 ORTHO05D009691 3.2e-73 279.3 274 54.7
CiPaw.11G113300 Carya illinoinensis HOM05D007894 ORTHO05D009691 3.9e-71 272.3 280 55.4
TWI81G0638 Tripterygium wilfordii HOM05D007894 ORTHO05D009691 1.1e-70 270.8 266 53.4
Duzib084G0115 Durio zibethinus HOM05D007894 ORTHO05D009691 2.5e-70 269.6 265 55.8
TAR629G0466 Trochodendron aralioides HOM05D007894 ORTHO05D009691 4.3e-70 268.9 277 54.9
Gohir.A12G239800 Gossypium hirsutum HOM05D007894 ORTHO05D009691 3.6e-69 265.8 266 53.0
Cfa011931 Carpinus fangiana HOM05D007894 ORTHO05D009691 1.8e-68 263.5 269 54.3
Haze_09166 Corylus avellana HOM05D007894 ORTHO05D009691 6.8e-68 261.5 269 52.8
Gorai.008G258200 Gossypium raimondii HOM05D007894 ORTHO05D009691 2.0e-67 260.0 266 53.0
CiPaw.12G077900 Carya illinoinensis HOM05D007894 ORTHO05D009691 3.2e-65 252.7 286 50.3
CANSAT21G2064 Cannabis sativa HOM05D007894 ORTHO05D009691 6.0e-64 248.4 270 51.5
Sed0027072 Sechium edule HOM05D007894 ORTHO05D009691 6.0e-64 248.4 266 51.5
QL02p028226 Quercus lobata HOM05D007894 ORTHO05D009691 7.8e-64 248.1 283 48.8
PGR042G1438 Punica granatum HOM05D007894 ORTHO05D009691 2.3e-63 246.5 282 47.9
Gohir.D12G241000 Gossypium hirsutum HOM05D007894 ORTHO05D009691 2.5e-62 243.0 266 51.1
Manes.02G003300 Manihot esculenta HOM05D007894 ORTHO05D009691 5.2e-60 235.3 273 48.0
Cpa.g.sc175.21 Carica papaya HOM05D007894 ORTHO05D009691 1.5e-59 233.8 268 47.4
Gorai.004G129900 Gossypium raimondii HOM05D007894 ORTHO05D009691 2.6e-59 233.0 272 49.6
Gohir.D08G123100 Gossypium hirsutum HOM05D007894 ORTHO05D009691 4.4e-59 232.3 272 48.5
Gohir.A08G110200 Gossypium hirsutum HOM05D007894 ORTHO05D009691 1.7e-58 230.3 268 50.0
ClCG01G001550 Citrullus lanatus HOM05D007894 ORTHO05D009691 1.1e-57 227.6 277 48.4
Aa31LG6G7360 Aethionema arabicum HOM05D007894 ORTHO05D009691 1.2e-56 224.2 266 48.5
CsaV3_5G001720 Cucumis sativus L. HOM05D007894 ORTHO05D009691 2.1e-56 223.4 276 47.8
MELO3C005782.2 Cucumis melo HOM05D007894 ORTHO05D009691 4.6e-56 222.2 278 48.2
Dinv12925 Davidia involucrata HOM05D007894 ORTHO05D009691 6.0e-56 221.9 259 51.7
Potri.001G082500 Populus trichocarpa HOM05D007894 ORTHO05D009691 6.0e-56 221.9 270 48.5
Lj8P201T33 Lonicera japonica HOM05D007894 ORTHO05D009691 7.8e-56 221.5 264 48.5
Sp7g22070 Schrenkiella parvula HOM05D007894 ORTHO05D009691 1.7e-55 220.3 270 46.3
Nn3g18883 Nelumbo nucifera HOM05D007894 ORTHO05D009691 6.6e-55 218.4 283 45.6
Lsat_1_v5_gn_3_14101 Lactuca sativa HOM05D007894 ORTHO05D009691 9.6e-54 214.5 258 48.8
BcaNung01115 Brassica carinata HOM05D007894 ORTHO05D009691 1.8e-52 210.3 270 44.4
THA.LOC104815238 Tarenaya hassleriana HOM05D007894 ORTHO05D009691 2.4e-52 209.9 261 45.6
MBI12_g30970_MAGBIO Magnolia biondii HOM05D007894 ORTHO05D009691 4.0e-52 209.1 276 45.3
PGSC0003DMG400012120 Solanum tuberosum HOM05D007894 ORTHO05D009691 1.5e-51 207.2 265 48.3
Nitab4.5_0004251g0020 Nicotiana tabacum HOM05D007894 ORTHO05D009691 1.3e-50 204.1 262 46.2
Sopen08g031270 Solanum pennellii HOM05D007894 ORTHO05D009691 2.2e-50 203.4 261 48.3
Sc16g0010770 Simmondsia chinensis HOM05D007894 ORTHO05D009691 2.9e-50 203.0 275 44.0
Aqoxy7G00025 Aquilegia oxysepala HOM05D007894 ORTHO05D009691 6.4e-50 201.8 275 43.6
Potri.003G147800 Populus trichocarpa HOM05D007894 ORTHO05D009691 7.1e-49 198.4 270 44.4
A01p15370 Brassica napus HOM05D007894 ORTHO05D009691 6.0e-48 195.3 262 42.4
Thhalv10026087m.g Eutrema salsugineum HOM05D007894 ORTHO05D009691 5.1e-47 192.2 271 42.8
Nitab4.5_0007063g0010 Nicotiana tabacum HOM05D007894 ORTHO05D009691 6.6e-47 191.8 267 43.1
BcaC09g50910 Brassica carinata HOM05D007894 ORTHO05D009691 1.5e-46 190.7 268 41.0
Oeu043316.1 Olea europaea HOM05D007894 ORTHO05D009691 1.9e-46 190.3 276 43.8
Carub.0007s1699 Capsella rubella HOM05D007894 ORTHO05D009691 4.3e-46 189.1 272 42.6
HanXRQChr03g0086121 Helianthus annuus HOM05D007894 ORTHO05D009691 4.3e-46 189.1 258 44.6
Sabra03G0106300 Salix brachista HOM05D007894 ORTHO05D009691 1.6e-45 187.2 264 44.7
C01p19320 Brassica napus HOM05D007894 ORTHO05D009691 2.8e-45 186.4 268 40.7
BolC1t01858H Brassica oleracea HOM05D007894 ORTHO05D009691 2.8e-45 186.4 268 40.7
CARHR231510 Cardamine hirsuta HOM05D007894 ORTHO05D009691 2.8e-45 186.4 270 41.1
PSO170G2911 Papaver somniferum HOM05D007894 ORTHO05D009691 3.1e-44 183.0 287 39.7
MSTRG.12199 Avicennia marina HOM05D007894 ORTHO05D009691 6.9e-44 181.8 264 44.3
DCAR_006541 Daucus carota HOM05D007894 ORTHO05D009691 3.4e-43 179.5 261 43.7
ECA246G0434 Erigeron canadensis HOM05D007894 ORTHO05D009691 9.9e-43 177.9 274 42.7
AL7G29180 Arabidopsis lyrata HOM05D007894 ORTHO05D009691 4.6e-40 169.1 273 39.2
Ah.03g148140 Amaranthus hybridus HOM05D007894 ORTHO05D009691 1.8e-39 167.2 274 41.6
Solyc08g083050.1 Solanum lycopersicum HOM05D007894 ORTHO05D009691 2.8e-37 159.8 263 41.4
AT4G24110 Arabidopsis thaliana HOM05D007894 ORTHO05D009691 8.1e-37 158.3 272 37.1
Peaxi162Scf00074g00316 Petunia axillaris HOM05D007894 ORTHO05D009691 1.1e-36 157.9 260 40.0
Migut.O00947 Erythranthe guttata HOM05D007894 ORTHO05D009691 1.4e-36 157.5 225 46.7
Sabra03G0107400 Salix brachista HOM05D001294 ORTHO05D009691 9.0e-36 154.8 236 40.3
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.5e-33 146.7 203 42.4
PSO017G1799 Papaver somniferum HOM05D007894 ORTHO05D009691 3.3e-30 136.3 182 44.0
Zm00001eb000900 Zea mays HOM05D019640 ORTHO05D009691 3.4e-27 126.3 269 34.2
Actinidia22204 Actinidia chinensis HOM05D007894 ORTHO05D009691 6.5e-26 122.1 107 54.2
Lj6g0022493 Lotus japonicus HOM05D007894 ORTHO05D009691 2.8e-21 106.7 293 30.0
CDE04G0050 Ceratophyllum demersum HOM05D000458 ORTHO05D000951 1.7e-18 97.4 230 27.4
CDE12G0970 Ceratophyllum demersum HOM05D007894 ORTHO05D009691 1.6e-16 90.9 168 31.5
FAN10G4307 Fragaria x ananassa HOM05D007894 ORTHO05D009691 1.4e-15 87.8 94 51.1
HPP92_007394 Vanilla planifolia HOM05D007894 ORTHO05D009691 3.7e-13 79.7 147 36.1
unitig_62.g23645 Utricularia gibba HOM05D007894 ORTHO05D009691 2.6e-11 73.6 84 54.8
arahy.Tifrunner.gnm1.ann1.FCR0TM Arachis hypogaea HOM05D015518 ORTHO05D017458 5.5e-09 65.9 268 25.0
arahy.Tifrunner.gnm1.ann1.5IWW39 Arachis hypogaea HOM05D015518 ORTHO05D017458 7.9e-08 62.0 268 26.1
ATR0620G121 Amborella trichopoda HOM05D007894 ORTHO05D009691 1.8e-07 60.8 315 27.6
Mapoly0093s0038 Marchantia polymorpha HOM05D001555 ORTHO05D001616 1.8e-07 60.8 214 30.4
SEGI_23142 Sequoiadendron giganteum HOM05D001555 ORTHO05D009691 1.8e-07 60.8 202 28.7
Oeu047778.1 Olea europaea HOM05D001555 ORTHO05D001616 2.3e-07 60.5 202 25.7
Nitab4.5_0006280g0030 Nicotiana tabacum HOM05D001555 ORTHO05D001616 8.8e-07 58.5 201 25.9
Eucgr.F01567 Eucalyptus grandis HOM05D001555 ORTHO05D001616 2.0e-06 57.4 146 29.5
Mapoly0200s0005 Marchantia polymorpha HOM05D001555 ORTHO05D001616 2.0e-06 57.4 218 27.5
Nitab4.5_0005373g0040 Nicotiana tabacum HOM05D001555 ORTHO05D001616 2.0e-06 57.4 202 26.2
SGA_v2.0_scaffold189G40369 Striga asiatica HOM05D001555 ORTHO05D001616 2.0e-06 57.4 199 22.6
ATR0733G057 Amborella trichopoda HOM05D001555 ORTHO05D001616 2.6e-06 57.0 108 35.2
Lsat_1_v5_gn_1_17701 Lactuca sativa HOM05D001555 ORTHO05D001616 2.6e-06 57.0 188 25.5
Oeu002833.2 Olea europaea HOM05D001555 ORTHO05D001616 3.3e-06 56.6 234 25.2
BcaB07g31946 Brassica carinata HOM05D001555 ORTHO05D001616 5.7e-06 55.8 211 23.2
Rhsim11G0176900 Rhododendron simsii HOM05D001555 ORTHO05D001616 5.7e-06 55.8 188 26.6
Nitab4.5_0002296g0060 Nicotiana tabacum HOM05D001555 ORTHO05D001616 7.4e-06 55.5 205 25.4
HanXRQChr09g0268891 Helianthus annuus HOM05D001555 ORTHO05D001616 9.7e-06 55.1 184 30.4
TWI12G1279 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 9.7e-06 55.1 206 24.3
Zm00001eb399300 Zea mays HOM05D001555 ORTHO05D001616 9.7e-06 55.1 228 27.2


User provided reference genes

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