Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 1.1e-166 590.1 348 100.0
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 8.3e-90 334.7 359 65.5
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 1.5e-86 323.9 367 62.1
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 1.6e-85 320.5 360 59.7
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 1.8e-84 317.0 370 65.1
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 9.6e-78 294.7 367 59.9
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 1.8e-76 290.4 379 56.7
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 5.8e-75 285.4 368 57.6
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 2.9e-74 283.1 334 63.2
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 4.9e-74 282.3 366 60.1
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 6.4e-74 282.0 352 55.7
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 3.2e-73 279.6 380 57.1
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 1.3e-71 274.2 356 56.2
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.9e-70 270.4 323 53.9
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 7.3e-70 268.5 362 60.2
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.6e-69 266.2 323 52.9
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 3.6e-69 266.2 327 57.8
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 3.1e-68 263.1 319 53.3
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 3.1e-68 263.1 328 57.6
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 5.3e-68 262.3 351 50.1
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 6.4e-66 255.4 343 54.5
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 8.4e-66 255.0 316 57.6
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 2.4e-65 253.4 328 57.0
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.4e-65 253.4 328 57.0
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 2.4e-65 253.4 357 52.9
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.6e-64 250.8 345 55.9
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.7e-64 250.0 321 58.9
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.5e-64 249.6 321 57.9
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 7.9e-64 248.4 332 55.7
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 2.8e-61 240.0 326 50.6
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 1.1e-60 238.0 371 52.3
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.1e-60 238.0 348 50.9
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 2.0e-59 233.8 346 44.2
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 8.4e-58 228.4 319 55.5
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 4.2e-57 226.1 266 65.0
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 7.1e-57 225.3 341 50.1
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 2.7e-56 223.4 319 46.7
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 7.9e-56 221.9 352 51.1
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.0e-55 221.5 374 48.1
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 2.3e-55 220.3 363 44.1
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 3.3e-54 216.5 313 52.7
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 4.3e-54 216.1 249 56.6
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 9.6e-54 214.9 340 51.2
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 1.8e-52 210.7 340 52.9
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 3.1e-52 209.9 323 52.3
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 5.3e-52 209.1 338 43.5
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 1.2e-51 208.0 383 48.6
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 6.5e-50 202.2 298 51.3
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 2.5e-49 200.3 265 58.9
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 4.2e-49 199.5 252 61.1
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 3.5e-48 196.4 249 61.4
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 4.6e-48 196.1 414 44.7
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 4.6e-48 196.1 304 53.0
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 6.0e-48 195.7 345 50.4
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 3.0e-47 193.4 314 48.4
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.1e-46 191.4 307 52.4
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 1.1e-46 191.4 313 48.2
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 2.5e-46 190.3 249 61.0
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.3e-46 189.9 307 52.1
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 7.4e-46 188.7 249 58.6
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 1.3e-45 188.0 249 57.8
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 2.1e-45 187.2 346 46.2
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.1e-44 184.9 315 51.4
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 6.5e-42 175.6 323 49.8
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 6.7e-39 165.6 329 48.6
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 8.7e-39 165.2 323 45.8
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 9.7e-38 161.8 308 42.2
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 1.3e-37 161.4 314 38.9
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.6e-37 161.0 341 43.1
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 4.8e-37 159.5 259 52.9
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 3.1e-36 156.8 361 40.7
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 6.9e-36 155.6 361 39.9
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 3.4e-35 153.3 275 38.5
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 1.3e-34 151.4 341 40.2
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 3.8e-34 149.8 239 40.6
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 5.5e-33 146.0 339 41.9
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 5.5e-33 146.0 347 35.4
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 5.1e-31 139.4 340 40.3
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 6.7e-31 139.0 308 39.0
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 6.7e-31 139.0 308 39.0
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 8.8e-31 138.7 334 37.7
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 8.8e-31 138.7 334 37.7
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 6.5e-26 122.5 337 38.9
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 4.2e-25 119.8 334 37.4
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 1.4e-23 114.8 316 34.5
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 8.8e-23 112.1 305 41.0
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 8.8e-23 112.1 170 45.3
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.1e-22 111.7 149 48.3
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 7.4e-22 109.0 294 33.0
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 1.3e-21 108.2 305 40.7
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 4.1e-20 103.2 260 35.4
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 1.6e-19 101.3 325 32.9
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 8.0e-16 89.0 62 75.8
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 1.4e-15 88.2 368 29.3
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 4.0e-15 86.7 151 52.3
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 1.7e-13 81.3 318 27.0
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 5.3e-12 76.3 213 32.9
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 1.6e-11 74.7 216 36.1
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 4.5e-11 73.2 172 36.0
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 4.7e-08 63.2 187 30.5
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 2.0e-06 57.8 186 30.1


User provided reference genes

Program Settings