Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 4.9e-252 874.0 445 100.0
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 6.0e-93 345.5 438 50.5
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 8.4e-87 325.1 437 48.7
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 7.1e-86 322.0 434 49.1
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.5e-83 314.3 399 46.1
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 4.1e-81 306.2 442 46.6
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 2.0e-80 303.9 462 43.9
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 6.7e-76 288.9 470 41.3
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 9.7e-75 285.0 490 41.0
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 9.7e-75 285.0 446 44.2
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 1.3e-74 284.6 420 45.5
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 4.5e-72 276.2 443 42.9
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 5.0e-71 272.7 454 41.4
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 1.1e-70 271.6 466 41.4
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 1.1e-70 271.6 469 40.3
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 3.2e-70 270.0 382 46.9
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 9.4e-70 268.5 446 41.5
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 2.1e-69 267.3 430 44.9
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 2.7e-69 266.9 467 39.6
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 3.6e-69 266.5 439 41.5
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 4.7e-69 266.2 432 44.0
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 6.1e-69 265.8 435 42.8
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 6.1e-69 265.8 466 40.8
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 7.9e-69 265.4 484 41.3
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 1.0e-68 265.0 428 39.7
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 6.7e-68 262.3 430 43.3
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 1.5e-67 261.2 449 40.8
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 2.0e-67 260.8 468 39.3
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 2.0e-67 260.8 468 39.3
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 4.4e-67 259.6 463 39.5
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 1.7e-66 257.7 450 39.8
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 2.4e-65 253.8 451 41.5
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 1.5e-64 251.1 448 38.4
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 5.9e-64 249.2 442 42.3
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 1.0e-63 248.4 480 38.5
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 1.7e-63 247.7 468 38.7
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 8.5e-63 245.4 451 41.9
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 1.5e-62 244.6 395 40.5
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 5.5e-62 242.7 424 38.7
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 7.2e-62 242.3 431 38.3
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 3.6e-61 240.0 451 39.5
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 3.9e-60 236.5 471 39.1
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 1.1e-59 235.0 423 39.2
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.1e-59 235.0 423 39.2
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 2.6e-59 233.8 430 39.3
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 5.7e-59 232.6 441 39.5
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 1.3e-58 231.5 431 38.5
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 4.8e-58 229.6 468 38.9
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 1.4e-57 228.0 450 41.1
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 5.3e-57 226.1 425 39.8
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 5.3e-57 226.1 446 38.3
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 9.1e-57 225.3 449 38.3
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 9.1e-57 225.3 448 38.6
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 2.6e-56 223.8 351 43.3
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 2.6e-56 223.8 427 37.2
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 2.6e-56 223.8 436 36.0
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 7.7e-56 222.2 427 38.2
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.7e-55 221.1 441 38.1
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 3.8e-55 219.9 440 38.0
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 5.0e-55 219.5 450 36.4
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 5.0e-55 219.5 454 37.9
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 8.5e-55 218.8 459 38.3
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 2.5e-54 217.2 440 38.9
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 5.5e-54 216.1 407 39.3
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 6.1e-53 212.6 429 38.5
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 6.8e-52 209.1 440 37.3
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 1.2e-51 208.4 446 33.9
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 1.5e-51 208.0 439 36.4
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 3.4e-51 206.8 473 33.6
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 6.3e-50 202.6 455 35.8
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 1.8e-49 201.1 449 36.3
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 2.4e-49 200.7 446 35.7
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 6.5e-47 192.6 473 36.6
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.4e-44 184.9 447 34.9
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 3.4e-43 180.3 263 43.0
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 5.7e-43 179.5 433 34.9
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 1.1e-41 175.3 351 36.5
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 4.1e-41 173.3 483 32.9
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 1.5e-38 164.9 306 37.3
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 4.2e-38 163.3 433 31.2
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 2.0e-35 154.5 232 41.8
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 2.6e-35 154.1 204 45.1
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 2.6e-35 154.1 437 31.8
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 3.4e-35 153.7 207 45.4
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 1.7e-34 151.4 261 39.5
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 1.8e-33 147.9 260 40.8
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 5.2e-28 129.8 286 36.4
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 5.2e-28 129.8 211 35.1
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 2.0e-27 127.9 375 29.1
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 7.0e-25 119.4 191 43.5
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 9.2e-25 119.0 146 41.8
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 1.3e-23 115.2 195 36.9
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 2.3e-23 114.4 235 31.5
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 5.0e-23 113.2 79 67.1
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 2.8e-21 107.5 104 50.0
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 6.2e-21 106.3 236 30.1
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 5.2e-20 103.2 345 28.7
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 6.8e-20 102.8 128 49.2
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 4.6e-16 90.1 144 36.8
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 6.6e-15 86.3 140 34.3
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 6.6e-15 86.3 140 34.3
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 1.1e-14 85.5 83 54.2
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 8.1e-13 79.3 56 62.5
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 9.9e-11 72.4 69 46.4
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 2.7e-08 64.3 85 34.1
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 5.1e-07 60.1 88 35.2


User provided reference genes

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