Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 3.7e-288 994.2 504 100.0
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 1.1e-220 770.0 473 82.5
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 6.0e-206 721.1 469 77.0
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 3.3e-204 715.3 466 77.0
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 2.1e-203 712.6 469 76.5
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 6.8e-202 707.6 469 75.7
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 3.4e-201 705.3 459 75.8
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 9.9e-201 703.7 457 77.0
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 4.2e-199 698.4 473 75.5
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 2.1e-198 696.0 459 77.3
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 4.6e-198 694.9 459 76.9
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 2.3e-197 692.6 457 76.1
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 1.1e-196 690.3 474 74.7
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 9.6e-196 687.2 457 76.6
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.3e-195 686.8 457 76.6
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.8e-195 685.6 469 74.8
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 3.6e-195 685.3 456 74.8
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 3.6e-195 685.3 498 70.3
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 8.1e-195 684.1 469 74.6
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.4e-194 682.6 469 74.4
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 3.1e-194 682.2 455 75.8
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 4.0e-194 681.8 455 74.5
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 6.9e-194 681.0 462 74.0
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 9.0e-194 680.6 454 75.3
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 9.0e-194 680.6 457 76.1
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 2.6e-193 679.1 479 71.8
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 2.9e-192 675.6 455 74.5
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 2.4e-191 672.5 450 75.8
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 1.6e-190 669.8 486 71.6
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 7.9e-190 667.5 451 75.8
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 7.9e-190 667.5 442 76.5
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 2.3e-189 666.0 462 72.7
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 1.9e-188 662.9 462 72.3
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 2.1e-187 659.4 470 71.5
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 2.1e-187 659.4 455 72.7
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 2.8e-187 659.1 465 72.3
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 2.8e-187 659.1 455 72.3
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 3.1e-186 655.6 455 71.6
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 5.3e-186 654.8 455 72.1
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 9.0e-186 654.1 468 70.7
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 2.0e-185 652.9 436 76.1
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 7.6e-185 651.0 471 69.9
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 1.3e-184 650.2 471 69.6
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 1.4e-183 646.7 459 70.8
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 1.4e-183 646.7 460 72.0
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 1.4e-183 646.7 456 71.3
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 1.9e-183 646.4 471 70.9
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.2e-182 643.7 470 70.2
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.6e-182 643.3 460 70.9
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 2.1e-182 642.9 459 70.4
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 3.9e-181 638.6 466 70.2
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 5.1e-181 638.3 463 70.2
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 6.7e-181 637.9 454 71.1
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 6.7e-181 637.9 471 69.2
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 6.7e-181 637.9 450 70.9
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 8.7e-181 637.5 473 70.6
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 3.3e-180 635.6 461 71.4
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 3.3e-180 635.6 461 71.4
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 1.6e-179 633.3 470 68.1
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 2.4e-178 629.4 484 66.3
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 5.3e-178 628.2 455 70.5
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 9.0e-178 627.5 465 68.6
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 1.1e-175 620.5 474 67.3
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 3.5e-174 615.5 476 68.9
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 1.3e-173 613.6 460 67.8
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 3.0e-173 612.5 425 74.1
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 1.1e-172 610.5 460 68.7
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 4.3e-172 608.6 465 67.7
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 4.3e-172 608.6 415 74.9
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.0e-169 599.7 468 67.5
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 3.2e-167 592.4 470 65.3
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 3.7e-163 578.9 454 64.5
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 3.1e-162 575.9 438 66.7
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 9.1e-162 574.3 450 64.7
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 4.5e-161 572.0 457 65.6
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.3e-160 570.5 589 53.7
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 4.2e-159 565.5 454 65.4
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 3.9e-157 558.9 448 65.6
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 3.9e-157 558.9 459 64.9
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.1e-157 558.5 368 75.5
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 5.7e-156 555.1 455 62.9
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 7.4e-156 554.7 530 57.9
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 9.7e-156 554.3 380 75.0
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.2e-153 547.4 414 69.8
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 2.0e-153 546.6 473 62.8
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 2.2e-147 526.6 466 57.5
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 3.1e-146 522.7 452 61.3
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 9.1e-146 521.2 475 60.8
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.2e-145 520.8 340 77.1
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.3e-144 517.3 515 58.1
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 2.9e-144 516.2 457 61.7
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 2.0e-140 503.4 470 58.5
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 5.5e-135 485.3 364 67.6
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 8.0e-134 481.5 468 56.6
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 3.7e-131 472.6 327 71.9
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.8e-130 470.3 497 53.7
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 2.9e-128 463.0 463 55.3
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 1.7e-123 447.2 363 63.1
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 2.8e-123 446.4 341 69.8
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 9.2e-122 441.4 331 66.8
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 8.9e-117 424.9 444 54.3
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 2.7e-113 413.3 273 75.5
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 4.6e-113 412.5 471 48.2
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 2.0e-108 397.1 453 51.7
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 2.9e-107 393.3 465 46.7
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 1.9e-106 390.6 309 65.7
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 1.6e-105 387.5 462 50.6
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 6.8e-101 372.1 271 69.7
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 1.7e-99 367.5 477 43.8
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 6.6e-96 355.5 306 58.8
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 8.1e-94 348.6 302 60.3
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 3.3e-79 300.1 377 45.9
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 9.6e-79 298.5 287 56.8
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.5e-68 264.6 419 44.2
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.1e-66 258.5 454 37.7
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 1.3e-64 251.5 760 27.8
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 4.5e-60 236.5 163 74.8
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.9e-47 194.5 174 62.1
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 3.1e-45 187.2 162 61.7
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 6.9e-37 159.5 174 51.7
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 5.9e-36 156.4 453 29.1
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 1.7e-27 128.3 88 72.7
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 5.0e-27 126.7 79 75.9
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 3.2e-26 124.0 67 86.6
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 4.2e-26 123.6 520 25.2
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 2.6e-23 114.4 89 62.9
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 1.4e-21 108.6 105 59.0
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 9.8e-15 85.9 63 69.8
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 5.5e-10 70.1 212 30.2
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 8.0e-09 66.2 70 47.1
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 3.4e-07 60.8 113 36.3


User provided reference genes

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