Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.3e-121 439.9 243 100.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 8.4e-97 357.5 242 78.1
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 3.2e-96 355.5 241 79.3
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 3.5e-95 352.1 244 78.7
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.0e-94 350.5 242 76.4
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 4.3e-93 345.1 245 75.5
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 4.3e-93 345.1 243 76.5
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 4.3e-93 345.1 243 74.9
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.3e-92 343.6 245 75.5
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.8e-91 339.7 243 74.1
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 3.1e-91 339.0 243 75.3
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.4e-90 335.5 243 74.1
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 5.8e-90 334.7 245 73.9
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.7e-89 333.2 243 72.0
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 1.7e-89 333.2 243 73.7
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 2.2e-89 332.8 236 75.4
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.9e-89 332.4 252 72.6
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 2.9e-89 332.4 245 73.5
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 4.9e-89 331.6 243 72.0
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 6.4e-89 331.3 241 73.4
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.1e-88 330.5 243 73.3
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.9e-88 329.7 241 72.6
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 3.2e-88 328.9 220 78.2
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.1e-88 327.8 243 73.7
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 72.4
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 72.4
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 6.0e-87 324.7 243 71.6
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 7.9e-87 324.3 243 71.6
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 7.9e-87 324.3 243 71.6
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.3e-86 323.6 245 71.8
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 5.1e-86 321.6 220 77.3
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.1e-85 320.5 207 79.2
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.5e-85 320.1 243 71.2
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 3.3e-85 318.9 222 77.9
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 3.3e-85 318.9 221 75.6
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.3e-84 317.0 220 75.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 1.3e-84 317.0 243 70.4
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 1.1e-83 313.9 225 71.1
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.4e-83 313.5 216 73.6
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 4.0e-83 312.0 213 73.7
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.0e-83 312.0 208 77.4
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 9.9e-82 307.4 243 66.3
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.7e-81 306.6 204 78.9
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.7e-81 306.6 246 67.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 2.2e-81 306.2 208 76.0
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 3.8e-81 305.4 243 67.1
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 3.8e-81 305.4 212 74.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.8e-81 305.4 252 67.5
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 8.4e-81 304.3 213 72.3
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.9e-80 303.1 213 71.4
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 3.2e-80 302.4 212 73.6
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.2e-80 302.4 215 72.1
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 3.2e-80 302.4 246 67.9
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 5.5e-80 301.6 243 67.5
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 7.1e-80 301.2 217 69.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 7.1e-80 301.2 243 67.1
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 7.1e-80 301.2 215 71.6
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 9.3e-80 300.8 243 66.7
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.1e-79 299.7 243 65.8
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 2.1e-79 299.7 213 71.8
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 7.9e-79 297.7 215 71.2
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.0e-78 297.4 212 68.9
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.3e-78 297.0 243 65.8
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.8e-78 296.6 243 65.8
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.8e-78 296.6 243 65.8
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.8e-78 296.6 243 66.7
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.8e-78 296.6 215 71.6
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.3e-78 296.2 243 65.8
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 3.0e-78 295.8 215 71.6
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.9e-78 295.4 243 65.8
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.9e-78 295.4 243 65.8
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.9e-78 295.4 243 65.8
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 3.9e-78 295.4 196 77.6
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 8.7e-78 294.3 222 69.8
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.1e-77 293.9 224 68.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 226 68.1
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.5e-77 293.5 215 69.8
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 243 64.6
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.9e-77 293.1 217 70.5
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.9e-77 293.1 217 70.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 3.3e-77 292.4 215 71.2
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 7.4e-77 291.2 215 69.8
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 2.1e-76 289.7 247 63.2
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 3.7e-76 288.9 219 69.9
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 3.1e-75 285.8 253 62.1
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.5e-74 283.5 222 63.1
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.9e-72 276.6 216 67.1
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 3.2e-72 275.8 222 62.6
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 9.3e-72 274.2 222 67.1
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 4.6e-71 271.9 243 61.3
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.3e-70 269.6 233 64.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 7.4e-69 264.6 192 72.9
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.6e-68 263.5 214 63.6
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 9.4e-64 247.7 224 60.3
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.8e-62 243.4 172 72.7
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.1e-61 240.7 214 60.7
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 4.3e-61 238.8 246 59.3
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 9.4e-56 221.1 214 52.8
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 7.9e-55 218.0 206 56.3
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.3e-49 200.7 227 48.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 3.1e-43 179.5 157 66.9
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 2.2e-41 173.3 183 57.9
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 5.7e-37 158.7 211 45.0
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.2e-36 156.8 99 85.9
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.3e-33 147.5 117 65.0
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.6e-31 140.6 94 75.5
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.5e-29 134.0 244 39.3
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.1e-24 117.9 79 79.7
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.2e-18 97.8 209 34.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 3.4e-13 79.7 210 29.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 9.2e-11 71.6 52 73.1
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 2.7e-10 70.1 59 61.0
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 4.7e-07 59.3 46 69.6


User provided reference genes

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