Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1379_Atru.chr9.1380 Acer truncatum HOM05D005270 ORTHO05D006239 3.0e-54 214.9 110 100.0
Atru.chr9.1383 Acer truncatum HOM05D005270 ORTHO05D006239 3.0e-54 214.9 110 100.0
Duzib205G1833 Durio zibethinus HOM05D005270 ORTHO05D006239 2.7e-50 201.8 110 91.8
Ciclev10020501m.g Citrus clementina HOM05D005270 ORTHO05D006239 4.5e-50 201.1 110 90.9
QL12p013868 Quercus lobata HOM05D005270 ORTHO05D006239 1.0e-49 199.9 109 89.9
Eucgr.D02030 Eucalyptus grandis HOM05D005270 ORTHO05D006239 1.3e-49 199.5 110 90.0
Potri.001G120400 Populus trichocarpa HOM05D005270 ORTHO05D006239 1.3e-49 199.5 110 90.9
PGR031G3926 Punica granatum HOM05D005270 ORTHO05D006239 8.6e-49 196.8 110 89.1
Sabra01G0092800 Salix brachista HOM05D005270 ORTHO05D006239 1.1e-48 196.4 110 90.0
CiPaw.11G150400 Carya illinoinensis HOM05D005270 ORTHO05D006239 4.3e-48 194.5 110 86.4
Duzib068G0557 Durio zibethinus HOM05D005270 ORTHO05D006239 4.3e-48 194.5 110 88.2
Thecc.03G257000 Theobroma cacao HOM05D005270 ORTHO05D006239 4.3e-48 194.5 110 88.2
Gohir.D09G190100 Gossypium hirsutum HOM05D005270 ORTHO05D006239 7.3e-48 193.7 110 87.3
Gorai.006G212700 Gossypium raimondii HOM05D005270 ORTHO05D006239 7.3e-48 193.7 110 87.3
COL.COLO4_37215 Corchorus olitorius HOM05D005270 ORTHO05D006239 9.5e-48 193.4 110 89.1
Gohir.A03G010000 Gossypium hirsutum HOM05D005270 ORTHO05D006239 9.5e-48 193.4 110 87.3
Manes.01G076600 Manihot esculenta HOM05D005270 ORTHO05D006239 9.5e-48 193.4 110 86.4
Gorai.N027100 Gossypium raimondii HOM05D005270 ORTHO05D006239 2.8e-47 191.8 110 86.4
Gohir.A09G195500 Gossypium hirsutum HOM05D005270 ORTHO05D006239 3.6e-47 191.4 110 85.5
Gohir.D03G160700 Gossypium hirsutum HOM05D005270 ORTHO05D006239 3.6e-47 191.4 110 86.4
Prupe.5G075500 Prunus persica HOM05D005270 ORTHO05D006239 3.6e-47 191.4 110 85.5
TAR629G2769 Trochodendron aralioides HOM05D005270 ORTHO05D006239 3.6e-47 191.4 110 86.4
GSVIVG01001274001 Vitis vinifera HOM05D005270 ORTHO05D006239 3.6e-47 191.4 110 85.5
GSVIVG01004774001 Vitis vinifera HOM05D005270 ORTHO05D006239 3.6e-47 191.4 110 85.5
CANSAT21G2027 Cannabis sativa HOM05D005270 ORTHO05D006239 4.7e-47 191.0 110 85.5
TWI81G0718 Tripterygium wilfordii HOM05D005270 ORTHO05D006239 8.0e-47 190.3 110 84.5
Ca_25339_v3 Cicer arietinum L. HOM05D005270 ORTHO05D006239 3.0e-46 188.3 110 84.5
MD06G1067000 Malus domestica HOM05D005270 ORTHO05D006239 8.9e-46 186.8 110 82.7
Psat4g070360 Pisum sativum HOM05D005270 ORTHO05D006239 8.9e-46 186.8 110 82.7
FvH4_5g00280 Fragaria vesca HOM05D005270 ORTHO05D006239 1.2e-45 186.4 110 82.7
FAN08G1405 Fragaria x ananassa HOM05D005270 ORTHO05D006239 1.2e-45 186.4 110 82.7
RcHm_v2.0_Chr7g0202331 Rosa chinensis HOM05D005270 ORTHO05D006239 1.2e-45 186.4 110 82.7
Dinv21601 Davidia involucrata HOM05D005270 ORTHO05D006239 2.0e-45 185.7 110 80.0
Sc01g0009340 Simmondsia chinensis HOM05D005270 ORTHO05D006239 2.0e-45 185.7 110 82.7
TPR.G37612 Trifolium pratense HOM05D005270 ORTHO05D006239 2.0e-45 185.7 110 82.7
Rhsim07G0104300 Rhododendron simsii HOM05D005270 ORTHO05D006239 4.4e-45 184.5 110 81.8
Solyc08g079070.2 Solanum lycopersicum HOM05D005270 ORTHO05D006239 4.4e-45 184.5 110 80.9
AUR62039933 Chenopodium quinoa HOM05D005270 ORTHO05D006239 5.8e-45 184.1 110 81.8
FAN18G1040 Fragaria x ananassa HOM05D005270 ORTHO05D006239 7.5e-45 183.7 110 81.8
Phvul.003G218000 Phaseolus vulgaris HOM05D005270 ORTHO05D006239 7.5e-45 183.7 110 81.8
Sopen08g027530 Solanum pennellii HOM05D005270 ORTHO05D006239 7.5e-45 183.7 110 80.0
THA.LOC104809459 Tarenaya hassleriana HOM05D005270 ORTHO05D006239 7.5e-45 183.7 110 81.8
MELO3C005559.2 Cucumis melo HOM05D005270 ORTHO05D006239 9.8e-45 183.3 110 81.8
CsaV3_5G003980 Cucumis sativus L. HOM05D005270 ORTHO05D006239 9.8e-45 183.3 110 81.8
Glyma.05G056400 Glycine max HOM05D005270 ORTHO05D006239 9.8e-45 183.3 110 81.8
Lalb_Chr05g0225581 Lupinus albus HOM05D005270 ORTHO05D006239 9.8e-45 183.3 110 82.7
Actinidia05188 Actinidia chinensis HOM05D005270 ORTHO05D006239 1.3e-44 183.0 110 80.9
ClCG01G003850 Citrullus lanatus HOM05D005270 ORTHO05D006239 1.3e-44 183.0 110 81.8
FAN13G2928 Fragaria x ananassa HOM05D005270 ORTHO05D006239 1.3e-44 183.0 110 80.9
Oeu038010.1 Olea europaea HOM05D005270 ORTHO05D006239 1.3e-44 183.0 110 79.1
Actinidia27450 Actinidia chinensis HOM05D005270 ORTHO05D006239 1.7e-44 182.6 110 79.1
BraA06t24120Z Brassica rapa HOM05D005270 ORTHO05D006239 1.7e-44 182.6 111 82.0
AUR62007475 Chenopodium quinoa HOM05D005270 ORTHO05D006239 1.7e-44 182.6 110 80.9
PGSC0003DMG400004791 Solanum tuberosum HOM05D005270 ORTHO05D006239 1.7e-44 182.6 110 80.0
A06p09330 Brassica napus HOM05D005270 ORTHO05D006239 2.2e-44 182.2 111 82.0
CSS0023019 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 2.2e-44 182.2 110 79.1
CSS0046114 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 2.2e-44 182.2 110 79.1
Peaxi162Scf00002g00815 Petunia axillaris HOM05D005270 ORTHO05D006239 2.2e-44 182.2 110 79.1
Sed0019529 Sechium edule HOM05D005270 ORTHO05D006239 2.2e-44 182.2 108 80.6
arahy.Tifrunner.gnm1.ann1.9F7ELE Arachis hypogaea HOM05D005270 ORTHO05D006239 2.9e-44 181.8 110 80.0
EL10Ac5g13010 Beta vulgaris HOM05D005270 ORTHO05D006239 3.7e-44 181.4 110 79.1
Sp1g10840 Schrenkiella parvula HOM05D005270 ORTHO05D006239 3.7e-44 181.4 111 82.0
C05p11010 Brassica napus HOM05D005270 ORTHO05D006239 4.9e-44 181.0 111 81.1
Carub.0001s1190 Capsella rubella HOM05D005270 ORTHO05D006239 4.9e-44 181.0 111 81.1
Aa31LG1G2400 Aethionema arabicum HOM05D005270 ORTHO05D006239 6.4e-44 180.6 110 80.0
CARHR012530 Cardamine hirsuta HOM05D005270 ORTHO05D006239 6.4e-44 180.6 111 81.1
VMungo0251G3554 Vigna mungo HOM05D005270 ORTHO05D006239 6.4e-44 180.6 110 80.9
FAN04G3018 Fragaria x ananassa HOM05D005270 ORTHO05D006239 8.3e-44 180.3 115 79.1
Glyma.17G138600 Glycine max HOM05D005270 ORTHO05D006239 8.3e-44 180.3 110 80.9
Cc08_g12920 Coffea canephora HOM05D005270 ORTHO05D006239 1.1e-43 179.9 110 77.3
Migut.E01048 Erythranthe guttata HOM05D005270 ORTHO05D006239 1.1e-43 179.9 110 78.2
Hma1.2p1_1414F.1_g281890 Hydrangea macrophylla HOM05D005270 ORTHO05D006239 1.1e-43 179.9 110 77.3
Medtr4g101620 Medicago truncatula HOM05D005270 ORTHO05D006239 1.1e-43 179.9 110 80.0
vmacro14106 Vaccinium macrocarpon HOM05D005270 ORTHO05D006239 1.1e-43 179.9 110 77.3
arahy.Tifrunner.gnm1.ann1.VW53Z5 Arachis hypogaea HOM05D005270 ORTHO05D006239 1.4e-43 179.5 110 79.1
BolC5t29844H Brassica oleracea HOM05D005270 ORTHO05D006239 1.4e-43 179.5 111 80.2
CAN.G1217.18 Capsicum annuum HOM05D000486 ORTHO05D000375 1.4e-43 179.5 108 78.7
Lj4g0020394 Lotus japonicus HOM05D005270 ORTHO05D006239 1.8e-43 179.1 110 81.8
HPP92_022434 Vanilla planifolia HOM05D005270 ORTHO05D006239 1.8e-43 179.1 110 78.2
Thhalv10007790m.g Eutrema salsugineum HOM05D005270 ORTHO05D006239 2.4e-43 178.7 111 80.2
SalBow1G0839 Salvia bowleyana HOM05D005270 ORTHO05D006239 2.4e-43 178.7 110 78.2
AT1G12230 Arabidopsis thaliana HOM05D005270 ORTHO05D006239 4.1e-43 177.9 111 79.3
MSTRG.25537 Avicennia marina HOM05D005270 ORTHO05D006239 5.4e-43 177.6 110 75.5
ATR1152G004 Amborella trichopoda HOM05D005270 ORTHO05D006239 7.0e-43 177.2 110 76.4
DCAR_006814 Daucus carota HOM05D005270 ORTHO05D006239 9.2e-43 176.8 110 78.2
AL1G23510 Arabidopsis lyrata HOM05D005270 ORTHO05D006239 1.2e-42 176.4 111 79.3
Lj2A211T58 Lonicera japonica HOM05D005270 ORTHO05D006239 1.6e-42 176.0 110 77.3
MBI04_g37584_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D006239 2.0e-42 175.6 110 77.3
unitig_0.g1234 Utricularia gibba HOM05D005270 ORTHO05D006239 2.7e-42 175.3 110 75.5
PSO017G6911 Papaver somniferum HOM05D005270 ORTHO05D006239 4.6e-42 174.5 110 79.1
Zm00001eb172680 Zea mays HOM05D005270 ORTHO05D006239 4.6e-42 174.5 110 75.5
Aqoxy7G00723 Aquilegia oxysepala HOM05D005270 ORTHO05D006239 6.0e-42 174.1 110 76.4
PSO170G6680 Papaver somniferum HOM05D005270 ORTHO05D006239 6.0e-42 174.1 110 80.0
HanXRQChr03g0087851 Helianthus annuus HOM05D005270 ORTHO05D006239 1.7e-41 172.6 110 72.7
SEGI_03700 Sequoiadendron giganteum HOM05D005270 ORTHO05D006239 3.9e-41 171.4 110 74.5
SGA_v2.0_scaffold144G35994 Striga asiatica HOM05D005270 ORTHO05D003965 8.6e-41 170.2 108 74.1
Lsat_1_v5_gn_6_90321 Lactuca sativa HOM05D005270 ORTHO05D006239 1.5e-40 169.5 110 73.6
ECA240G0014 Erigeron canadensis HOM05D000201 ORTHO05D006239 2.1e-39 165.6 109 68.8
Dinv39103 Davidia involucrata HOM05D000201 ORTHO05D001515 6.2e-39 164.1 99 78.8
CDE12G0422 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 7.5e-37 157.1 110 67.3
Cpa.g.sc29.127 Carica papaya HOM05D005270 ORTHO05D006239 1.1e-35 153.3 209 47.4
AagrBONN_evm.TU.Sc2ySwM_369.586 Anthoceros agrestis HOM05D005270 ORTHO05D006239 1.9e-35 152.5 110 68.2
BcaC05g25195 Brassica carinata HOM05D005270 ORTHO05D006239 4.1e-35 151.4 95 77.9
Pp3c15_6350 Physcomitrium patens HOM05D005270 ORTHO05D006239 1.5e-32 142.9 110 61.8
DCAR_004923 Daucus carota HOM05D005270 ORTHO05D006239 1.2e-29 133.3 110 62.7
Mapoly0029s0029 Marchantia polymorpha HOM05D005270 ORTHO05D006239 3.7e-28 128.3 114 57.9
Nitab4.5_0009175g0010 Nicotiana tabacum HOM05D005270 ORTHO05D006239 8.3e-28 127.1 120 57.5
Nitab4.5_0000993g0070 Nicotiana tabacum HOM05D005270 ORTHO05D006239 1.9e-24 115.9 110 54.5
CBR_g37411 Chara braunii HOM05D005270 ORTHO05D006239 1.4e-22 109.8 110 51.8
CDE04G2727 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 1.3e-20 103.2 110 52.7
SalBow1G5553 Salvia bowleyana HOM05D005270 ORTHO05D006239 5.4e-19 97.8 62 74.2
Haze_07851 Corylus avellana HOM05D005270 ORTHO05D006239 1.0e-17 93.6 49 89.8
SalBow1G3426 Salvia bowleyana HOM05D005270 ORTHO05D006239 1.1e-11 73.6 51 60.8
BcaC07g41719 Brassica carinata HOM05D005270 ORTHO05D039702 1.1e-08 63.5 65 61.5
BolC8t52299H Brassica oleracea HOM05D005270 ORTHO05D039702 1.1e-08 63.5 65 61.5


User provided reference genes

Program Settings