Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1377 Acer truncatum HOM05D006860 ORTHO05D009547 1.5e-153 546.2 289 100.0
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 4.5e-81 305.4 289 58.1
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 4.2e-79 298.9 279 58.4
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 7.9e-78 294.7 276 58.3
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 7.9e-78 294.7 282 58.5
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 5.7e-76 288.5 270 57.4
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 1.3e-75 287.3 281 57.7
Ciclev10024312m.g Citrus clementina HOM05D006860 ORTHO05D009547 9.1e-74 281.2 275 58.2
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 2.5e-71 273.1 293 53.6
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 5.5e-71 271.9 281 50.5
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 7.2e-71 271.6 293 53.2
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 9.4e-71 271.2 296 53.7
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 6.1e-70 268.5 271 51.7
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 2.3e-69 266.5 275 49.5
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 1.5e-68 263.8 268 51.5
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 8.2e-67 258.1 255 56.5
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 1.4e-66 257.3 257 57.6
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 4.1e-66 255.8 286 47.9
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 9.1e-66 254.6 255 54.1
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 2.0e-65 253.4 283 49.5
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 1.0e-64 251.1 278 48.2
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.3e-64 250.8 256 54.3
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.3e-64 250.8 255 57.6
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 2.2e-64 250.0 277 48.7
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 2.2e-64 250.0 277 48.7
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 2.2e-64 250.0 275 48.4
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 3.8e-64 249.2 275 48.0
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 5.0e-64 248.8 276 48.9
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 5.0e-64 248.8 270 49.3
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 6.5e-64 248.4 275 48.4
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 1.9e-63 246.9 275 48.0
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 2.5e-63 246.5 277 48.4
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 4.2e-63 245.7 277 48.4
Cpa.g.sc29.129 Carica papaya HOM05D006860 ORTHO05D009547 3.6e-62 242.7 272 51.1
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 8.0e-62 241.5 271 50.6
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 1.5e-60 237.3 277 51.6
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 7.5e-60 235.0 278 45.7
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 9.7e-60 234.6 277 46.2
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 1.7e-59 233.8 269 50.9
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 1.8e-58 230.3 311 41.8
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 4.1e-58 229.2 270 46.7
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 1.2e-57 227.6 271 46.1
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 1.2e-57 227.6 274 47.1
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 3.5e-57 226.1 253 46.6
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 7.7e-57 224.9 256 53.9
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 7.7e-57 224.9 280 51.8
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 7.7e-57 224.9 253 46.6
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 1.3e-56 224.2 252 46.8
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 6.5e-56 221.9 278 42.8
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 6.5e-56 221.9 253 46.2
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 5.5e-55 218.8 215 52.1
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 7.2e-55 218.4 275 48.4
Lj6g0006421 Lotus japonicus HOM05D006860 ORTHO05D009547 9.4e-55 218.0 286 42.0
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 2.1e-54 216.9 258 47.3
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 3.6e-54 216.1 253 45.5
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 4.7e-54 215.7 292 47.3
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 4.7e-54 215.7 292 47.3
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 1.4e-53 214.2 262 46.2
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 1.8e-53 213.8 269 46.1
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 4.0e-53 212.6 227 49.3
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 2.0e-52 210.3 274 43.8
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 9.8e-52 208.0 245 48.2
PGR031G3062 Punica granatum HOM05D006860 ORTHO05D009547 8.3e-51 204.9 246 48.0
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 1.1e-50 204.5 227 47.6
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 2.4e-50 203.4 226 49.6
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 3.1e-50 203.0 262 44.3
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 3.5e-49 199.5 210 50.0
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 1.3e-48 197.6 252 40.5
EL10Ac5g13012 Beta vulgaris HOM05D006860 ORTHO05D009547 2.3e-48 196.8 260 44.2
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 2.9e-48 196.4 252 42.5
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 1.5e-47 194.1 213 47.9
TPR.G24674 Trifolium pratense HOM05D006860 ORTHO05D009547 2.8e-46 189.9 241 42.7
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 3.6e-46 189.5 299 41.8
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 1.3e-43 181.0 268 43.3
Ah.12g056480 Amaranthus hybridus HOM05D006860 ORTHO05D009547 1.4e-42 177.6 239 43.1
Actinidia27452 Actinidia chinensis HOM05D006860 ORTHO05D009547 2.0e-41 173.7 207 47.3
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 1.8e-37 160.6 262 38.5
Sc07g0009390 Simmondsia chinensis HOM05D000685 ORTHO05D000511 2.9e-35 153.3 247 42.9
HPP92_025603 Vanilla planifolia HOM05D006860 ORTHO05D009547 4.1e-34 149.4 276 35.1
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 6.0e-33 145.6 127 61.4
Ciclev10023898m.g Citrus clementina HOM05D006860 ORTHO05D009547 7.8e-33 145.2 131 66.4
HPP92_025643 Vanilla planifolia HOM05D006860 ORTHO05D009547 5.2e-29 132.5 260 34.6
BcaB03g15470 Brassica carinata HOM05D006860 ORTHO05D009547 3.4e-28 129.8 249 32.9
Sp7g20630 Schrenkiella parvula HOM05D006860 ORTHO05D015488 3.7e-27 126.3 246 34.6
BcaB03g15468 Brassica carinata HOM05D000561 ORTHO05D009547 2.4e-26 123.6 260 32.3
BcaNung01685 Brassica carinata HOM05D006860 ORTHO05D009547 2.8e-22 110.2 263 31.2
BcaNung02492 Brassica carinata HOM05D006860 ORTHO05D015488 8.1e-22 108.6 241 30.7
C07p51900 Brassica napus HOM05D006860 ORTHO05D015488 1.1e-21 108.2 241 30.7
BcaNung01686 Brassica carinata HOM05D006860 ORTHO05D009547 1.8e-21 107.5 261 30.3
BolC7t45689H Brassica oleracea HOM05D006860 ORTHO05D015488 1.8e-21 107.5 241 30.7
BraA03t14422Z Brassica rapa HOM05D006860 ORTHO05D015488 3.1e-21 106.7 244 30.7
Carub.0008s2329 Capsella rubella HOM05D006860 ORTHO05D009547 6.8e-21 105.5 250 28.0
Ciclev10010734m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.2e-20 104.8 112 55.4
Os02g0661300 Oryza sativa ssp. japonica HOM05D006860 ORTHO05D009547 1.5e-20 104.4 277 27.4
BcaNung01688 Brassica carinata HOM05D006860 ORTHO05D015488 2.6e-20 103.6 242 31.0
C07p51910 Brassica napus HOM05D006860 ORTHO05D028065 2.6e-20 103.6 251 31.9
A03p53560 Brassica napus HOM05D006860 ORTHO05D015488 3.4e-20 103.2 244 30.3
A03p53590 Brassica napus HOM05D006860 ORTHO05D015488 4.4e-20 102.8 253 32.0
BraA03t14423Z Brassica rapa HOM05D006860 ORTHO05D028065 4.4e-20 102.8 253 32.4
Zm00001eb249700 Zea mays HOM05D006860 ORTHO05D009547 4.4e-20 102.8 261 28.0
BcaNung02490 Brassica carinata HOM05D006860 ORTHO05D015488 7.6e-20 102.1 249 30.9
A03p53570 Brassica napus HOM05D006860 ORTHO05D028065 7.6e-20 102.1 253 32.4
BraA03t14425Z Brassica rapa HOM05D006860 ORTHO05D015488 7.6e-20 102.1 252 31.3
C07p51920 Brassica napus HOM05D006860 ORTHO05D015488 1.1e-18 98.2 249 28.9
BolC7t45692H Brassica oleracea HOM05D006860 ORTHO05D015488 1.1e-18 98.2 249 28.9
BolC7t45690H Brassica oleracea HOM05D006860 ORTHO05D028065 2.4e-18 97.1 253 30.4
AUR62007478 Chenopodium quinoa HOM05D006860 ORTHO05D009547 1.2e-17 94.7 109 45.0
Ciclev10018172m.g Citrus clementina HOM05D006860 ORTHO05D009547 8.6e-16 88.6 56 71.4
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 4.7e-14 82.8 129 41.1
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 8.4e-11 72.0 75 49.3
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 9.3e-10 68.6 72 50.0
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 3.5e-09 66.6 90 40.0
EL10Ac8g19726 Beta vulgaris HOM05D006860 ORTHO05D009547 1.0e-08 65.1 53 60.4
TPR.G18947 Trifolium pratense HOM05D006860 ORTHO05D009547 3.3e-07 60.1 56 53.6
AL7G31000 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 7.3e-07 58.9 103 35.0
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 7.3e-07 58.9 71 43.7
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 1.6e-06 57.8 62 45.2


User provided reference genes

Program Settings