Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1339 Acer truncatum HOM05D009510 ORTHO05D010335 9.6e-95 350.1 175 100.0
Potri.001G122600 Populus trichocarpa HOM05D009510 ORTHO05D010335 2.6e-23 112.8 186 43.5
Ciclev10022879m.g Citrus clementina HOM05D009510 ORTHO05D010335 1.7e-19 100.1 114 56.1
GSVIVG01001306001 Vitis vinifera HOM05D009510 ORTHO05D010335 3.9e-19 99.0 188 43.6
Duzib068G0669 Durio zibethinus HOM05D009510 ORTHO05D010335 1.9e-18 96.7 171 44.4
Sabra01G0094500 Salix brachista HOM05D009510 ORTHO05D010335 5.6e-18 95.1 192 39.1
Manes.01G079300 Manihot esculenta HOM05D009510 ORTHO05D010335 1.2e-17 94.0 182 39.6
Gohir.D08G190400 Gossypium hirsutum HOM05D009510 ORTHO05D010335 6.2e-17 91.7 173 40.5
Gorai.004G200500 Gossypium raimondii HOM05D009510 ORTHO05D010335 6.2e-17 91.7 173 40.5
Gohir.A08G172100 Gossypium hirsutum HOM05D009510 ORTHO05D010335 3.1e-16 89.4 178 41.6
CiPaw.12G108600 Carya illinoinensis HOM05D009510 ORTHO05D010335 8.9e-16 87.8 189 36.0
Thecc.03G254000 Theobroma cacao HOM05D009510 ORTHO05D010335 1.5e-15 87.0 185 40.5
Dinv39126 Davidia involucrata HOM05D009510 ORTHO05D010335 3.4e-15 85.9 184 36.4
Gohir.A12G220001 Gossypium hirsutum HOM05D009510 ORTHO05D010335 7.6e-15 84.7 174 37.4
Gorai.008G238200 Gossypium raimondii HOM05D009510 ORTHO05D010335 2.9e-14 82.8 180 36.7
Gohir.D12G222201 Gossypium hirsutum HOM05D009510 ORTHO05D010335 8.4e-14 81.3 181 35.9
Duzib205G1076 Durio zibethinus HOM05D009510 ORTHO05D010335 4.1e-13 79.0 175 41.1
Dinv21618 Davidia involucrata HOM05D009510 ORTHO05D010335 1.6e-12 77.0 187 34.8
Nitab4.5_0002727g0010 Nicotiana tabacum HOM05D012984 ORTHO05D010335 2.3e-11 73.2 168 33.9
Nitab4.5_0000312g0200 Nicotiana tabacum HOM05D012984 ORTHO05D010335 6.6e-11 71.6 168 35.1
Hma1.2p1_0753F.1_g212990 Hydrangea macrophylla HOM05D009510 ORTHO05D010335 3.3e-10 69.3 202 34.7
VMungo1215G2077 Vigna mungo HOM05D013054 ORTHO05D010335 3.3e-10 69.3 184 32.1
Prupe.5G072500 Prunus persica HOM05D015618 ORTHO05D010335 5.6e-10 68.6 169 34.3
Solyc08g078840.3 Solanum lycopersicum HOM05D012984 ORTHO05D010335 7.3e-10 68.2 174 32.2
PGSC0003DMG400004801 Solanum tuberosum HOM05D012984 ORTHO05D010335 7.3e-10 68.2 168 30.4
Phvul.002G062100 Phaseolus vulgaris HOM05D013054 ORTHO05D010335 9.6e-10 67.8 175 34.3
Lsat_1_v5_gn_6_91520 Lactuca sativa HOM05D012984 ORTHO05D010335 2.1e-09 66.6 179 31.3
PGR042G1660 Punica granatum HOM05D015618 ORTHO05D010335 2.1e-09 66.6 171 32.2
HanXRQChr03g0088641 Helianthus annuus HOM05D012984 ORTHO05D010335 2.8e-09 66.2 179 35.2
Glyma.01G210300 Glycine max HOM05D013054 ORTHO05D010335 4.7e-09 65.5 182 32.4
CsaV3_3G002810 Cucumis sativus L. HOM05D040458 ORTHO05D010335 1.8e-08 63.5 55 56.4
ClCG10G002770 Citrullus lanatus HOM05D040458 ORTHO05D010335 2.4e-08 63.2 55 56.4
Glyma.11G031700 Glycine max HOM05D013054 ORTHO05D010335 2.4e-08 63.2 187 34.2
CSS0028488 Camellia sinensis var. sinensis HOM05D009510 ORTHO05D010335 5.2e-08 62.0 159 32.1
Sopen08g027300 Solanum pennellii HOM05D012984 ORTHO05D010335 5.2e-08 62.0 54 61.1
MD00G1115000 Malus domestica HOM05D015618 ORTHO05D010335 6.8e-08 61.6 181 32.6
CAN.G1218.11 Capsicum annuum HOM05D012984 ORTHO05D010335 8.9e-08 61.2 48 66.7
RcHm_v2.0_Chr7g0202891 Rosa chinensis HOM05D015618 ORTHO05D010335 1.2e-07 60.8 195 35.4
Haze_07883 Corylus avellana HOM05D009510 ORTHO05D010335 1.5e-07 60.5 85 45.9
Lj2g0024641 Lotus japonicus HOM05D013054 ORTHO05D010335 2.0e-07 60.1 183 35.0
DCAR_027783 Daucus carota HOM05D009510 ORTHO05D010335 7.6e-07 58.2 173 27.7
DCAR_004946 Daucus carota HOM05D012984 ORTHO05D010335 9.9e-07 57.8 178 31.5
vmacro00232 Vaccinium macrocarpon HOM05D009510 ORTHO05D010335 9.9e-07 57.8 77 42.9
Cfa012745 Carpinus fangiana HOM05D009510 ORTHO05D010335 1.3e-06 57.4 103 40.8
arahy.Tifrunner.gnm1.ann1.52RI3H Arachis hypogaea HOM05D013054 ORTHO05D010335 2.2e-06 56.6 175 33.1
Medtr5g012400 Medicago truncatula HOM05D013054 ORTHO05D010335 2.2e-06 56.6 180 33.3
TWI81G0126 Tripterygium wilfordii HOM05D009510 ORTHO05D010335 2.9e-06 56.2 95 38.9
DCAR_006823 Daucus carota HOM05D009510 ORTHO05D010335 3.8e-06 55.8 176 29.5


User provided reference genes

Program Settings