Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1052 Acer truncatum HOM05D002693 ORTHO05D008074 1.3e-41 172.6 85 100.0
Cpa.g.sc4.47 Carica papaya HOM05D002693 ORTHO05D008074 5.3e-30 134.0 70 90.0
CiPaw.11G013400 Carya illinoinensis HOM05D002693 ORTHO05D008074 6.9e-30 133.7 70 90.0
MELO3C026235.2 Cucumis melo HOM05D002693 ORTHO05D008074 6.9e-30 133.7 70 90.0
CsaV3_1G000830 Cucumis sativus L. HOM05D002693 ORTHO05D008074 6.9e-30 133.7 70 90.0
Dinv38484 Davidia involucrata HOM05D002693 ORTHO05D008074 6.9e-30 133.7 70 90.0
Cc04_g10650 Coffea canephora HOM05D002693 ORTHO05D008074 1.2e-29 132.9 70 91.4
ClCG06G017610 Citrullus lanatus HOM05D002693 ORTHO05D008074 1.5e-29 132.5 69 89.9
Eucgr.K02765 Eucalyptus grandis HOM05D002693 ORTHO05D008074 1.5e-29 132.5 70 88.6
Nn4g22488 Nelumbo nucifera HOM05D002693 ORTHO05D008074 1.5e-29 132.5 70 88.6
Rhsim12G0171100 Rhododendron simsii HOM05D002693 ORTHO05D008074 1.5e-29 132.5 70 88.6
Oeu053509.1 Olea europaea HOM05D002693 ORTHO05D008074 2.0e-29 132.1 70 87.1
GSVIVG01007572001 Vitis vinifera HOM05D002693 ORTHO05D008074 2.0e-29 132.1 70 88.6
QL10p005573 Quercus lobata HOM05D002693 ORTHO05D008074 2.6e-29 131.7 69 88.4
Actinidia36776 Actinidia chinensis HOM05D002693 ORTHO05D008074 4.5e-29 131.0 70 87.1
AUR62025747 Chenopodium quinoa HOM05D002693 ORTHO05D008074 4.5e-29 131.0 70 90.0
Ciclev10020897m.g Citrus clementina HOM05D002693 ORTHO05D008074 4.5e-29 131.0 70 88.6
Manes.06G113900 Manihot esculenta HOM05D002693 ORTHO05D008074 4.5e-29 131.0 70 87.1
Cfa018903 Carpinus fangiana HOM05D002693 ORTHO05D008074 5.8e-29 130.6 70 88.6
AUR62001263 Chenopodium quinoa HOM05D002693 ORTHO05D008074 5.8e-29 130.6 70 90.0
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 5.8e-29 130.6 70 88.6
Aqoxy3G01325 Aquilegia oxysepala HOM05D002693 ORTHO05D008074 7.6e-29 130.2 70 87.1
Gohir.A09G244700 Gossypium hirsutum HOM05D002693 ORTHO05D008074 7.6e-29 130.2 70 87.1
Glyma.04G191700 Glycine max HOM05D002693 ORTHO05D008074 9.9e-29 129.8 70 87.1
Glyma.06G174200 Glycine max HOM05D002693 ORTHO05D008074 9.9e-29 129.8 70 87.1
BcaB01g00815 Brassica carinata HOM05D002693 ORTHO05D008074 1.3e-28 129.4 70 87.1
C08p23410 Brassica napus HOM05D002693 ORTHO05D008074 1.3e-28 129.4 70 87.1
BraA06t25011Z Brassica rapa HOM05D002693 ORTHO05D008074 1.3e-28 129.4 70 87.1
Potri.015G088500 Populus trichocarpa HOM05D002693 ORTHO05D008074 1.3e-28 129.4 70 87.1
PGR044G0360 Punica granatum HOM05D002693 ORTHO05D008074 1.3e-28 129.4 70 87.1
Sabra15G0111400 Salix brachista HOM05D002693 ORTHO05D008074 1.3e-28 129.4 70 87.1
THA.LOC104821498 Tarenaya hassleriana HOM05D002693 ORTHO05D008074 1.3e-28 129.4 70 85.7
MSTRG.11525 Avicennia marina HOM05D002693 ORTHO05D008074 2.9e-28 128.3 70 85.7
A06p19280 Brassica napus HOM05D002693 ORTHO05D008074 2.9e-28 128.3 70 85.7
Thhalv10010540m.g Eutrema salsugineum HOM05D002693 ORTHO05D008074 2.9e-28 128.3 70 85.7
Sp5g13640 Schrenkiella parvula HOM05D002693 ORTHO05D008074 2.9e-28 128.3 70 85.7
BolC8t49969H Brassica oleracea HOM05D002693 ORTHO05D008074 3.8e-28 127.9 70 87.1
DCAR_016425 Daucus carota HOM05D002693 ORTHO05D008074 3.8e-28 127.9 70 85.7
Medtr3g075230 Medicago truncatula HOM05D002693 ORTHO05D008074 3.8e-28 127.9 70 87.1
VMungo1309G0913 Vigna mungo HOM05D002693 ORTHO05D008074 3.8e-28 127.9 70 85.7
Lj1g0007454 Lotus japonicus HOM05D002693 ORTHO05D008074 4.9e-28 127.5 70 85.7
CANSAT80G0417 Cannabis sativa HOM05D002693 ORTHO05D008074 6.4e-28 127.1 70 85.7
Duzib205G0413 Durio zibethinus HOM05D002693 ORTHO05D008074 6.4e-28 127.1 70 85.7
Nitab4.5_0002531g0130 Nicotiana tabacum HOM05D002693 ORTHO05D008074 8.4e-28 126.7 70 84.3
Peaxi162Scf00089g00838 Petunia axillaris HOM05D002693 ORTHO05D008074 8.4e-28 126.7 70 84.3
BcaB01g00813 Brassica carinata HOM05D002693 ORTHO05D008074 1.1e-27 126.3 70 85.7
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 1.1e-27 126.3 70 85.7
TPR.G38598 Trifolium pratense HOM05D002693 ORTHO05D008074 1.1e-27 126.3 70 85.7
unitig_0.g1407 Utricularia gibba HOM05D002693 ORTHO05D008074 1.1e-27 126.3 70 84.3
Thecc.03G121000 Theobroma cacao HOM05D002693 ORTHO05D008074 1.4e-27 125.9 70 82.9
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.9e-27 125.6 70 85.7
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.9e-27 125.6 70 85.7
Lalb_Chr11g0069751 Lupinus albus HOM05D002693 ORTHO05D008074 1.9e-27 125.6 70 82.9
Solyc03g111610.3 Solanum lycopersicum HOM05D002693 ORTHO05D008074 1.9e-27 125.6 70 84.3
AT3G48420 Arabidopsis thaliana HOM05D002693 ORTHO05D008074 2.4e-27 125.2 70 84.3
EL10Ac7g18055 Beta vulgaris HOM05D002693 ORTHO05D008074 2.4e-27 125.2 70 88.6
Nitab4.5_0001360g0120 Nicotiana tabacum HOM05D002693 ORTHO05D008074 2.4e-27 125.2 70 84.3
Sopen03g030730 Solanum pennellii HOM05D002693 ORTHO05D008074 2.4e-27 125.2 70 84.3
BcaC01g02341 Brassica carinata HOM05D002693 ORTHO05D008074 3.2e-27 124.8 65 89.2
C03p66400 Brassica napus HOM05D002693 ORTHO05D008074 3.2e-27 124.8 65 89.2
BolC3t18913H Brassica oleracea HOM05D002693 ORTHO05D008074 3.2e-27 124.8 65 89.2
Phvul.009G169900 Phaseolus vulgaris HOM05D002693 ORTHO05D008074 3.2e-27 124.8 67 85.1
Sed0019566 Sechium edule HOM05D002693 ORTHO05D008074 3.2e-27 124.8 70 84.3
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 5.5e-27 124.0 70 82.9
CAN.G472.45 Capsicum annuum HOM05D002693 ORTHO05D008074 5.5e-27 124.0 70 80.0
Migut.O00226 Erythranthe guttata HOM05D002693 ORTHO05D008074 5.5e-27 124.0 67 82.1
ATR0824G037 Amborella trichopoda HOM05D002693 ORTHO05D008074 9.3e-27 123.2 70 81.4
ECA246G3621 Erigeron canadensis HOM05D002693 ORTHO05D008074 9.3e-27 123.2 68 83.8
PGSC0003DMG400015165 Solanum tuberosum HOM05D002693 ORTHO05D008074 9.3e-27 123.2 70 81.4
arahy.Tifrunner.gnm1.ann1.3ZI7DD Arachis hypogaea HOM05D002693 ORTHO05D008074 1.2e-26 122.9 70 81.4
CSS0044980 Camellia sinensis var. sinensis HOM05D002693 ORTHO05D008074 1.2e-26 122.9 65 87.7
Carub.0005s1458 Capsella rubella HOM05D002693 ORTHO05D008074 1.2e-26 122.9 70 82.9
TAR622G1430 Trochodendron aralioides HOM05D002693 ORTHO05D008074 1.2e-26 122.9 70 82.9
Aa31LG4G16990 Aethionema arabicum HOM05D002693 ORTHO05D008074 2.1e-26 122.1 68 82.4
Hund18531 Selenicereus undatus HOM05D002693 ORTHO05D008074 2.1e-26 122.1 70 82.9
MBI08_g18358_MAGBIO Magnolia biondii HOM05D002693 ORTHO05D008074 2.7e-26 121.7 71 84.5
Lj5A101T102 Lonicera japonica HOM05D002693 ORTHO05D008074 3.5e-26 121.3 70 82.9
A06p27660 Brassica napus HOM05D002693 ORTHO05D008074 4.6e-26 120.9 65 86.2
Os03g0565200 Oryza sativa ssp. japonica HOM05D002693 ORTHO05D008074 4.6e-26 120.9 70 81.4
HanXRQChr05g0156121 Helianthus annuus HOM05D002693 ORTHO05D008074 6.0e-26 120.6 67 83.6
Zm00001eb113090 Zea mays HOM05D002693 ORTHO05D008074 7.9e-26 120.2 69 84.1
HPP92_010508 Vanilla planifolia HOM05D002693 ORTHO05D008074 1.0e-25 119.8 70 78.6
Lsat_1_v5_gn_5_13101 Lactuca sativa HOM05D002693 ORTHO05D008074 1.3e-25 119.4 67 82.1
SalBow5G1929 Salvia bowleyana HOM05D002693 ORTHO05D008074 1.3e-25 119.4 70 81.4
CDE06G2530 Ceratophyllum demersum HOM05D002693 ORTHO05D008074 2.3e-25 118.6 65 86.2
FvH4_5g07070 Fragaria vesca HOM05D002693 ORTHO05D008074 3.0e-25 118.2 84 73.8
FAN08G3291 Fragaria x ananassa HOM05D002693 ORTHO05D008074 3.0e-25 118.2 84 73.8
FAN13G1374 Fragaria x ananassa HOM05D002693 ORTHO05D008074 3.0e-25 118.2 84 73.8
FAN18G1738 Fragaria x ananassa HOM05D002693 ORTHO05D008074 3.0e-25 118.2 84 73.8
Prupe.5G159800 Prunus persica HOM05D002693 ORTHO05D008074 3.9e-25 117.9 70 85.7
MD14G1165800 Malus domestica HOM05D002693 ORTHO05D008074 6.7e-25 117.1 70 85.7
FAN04G2647 Fragaria x ananassa HOM05D002693 ORTHO05D008074 1.5e-24 115.9 84 72.6
MD06G1160600 Malus domestica HOM05D002693 ORTHO05D008074 4.3e-24 114.4 65 81.5
RcHm_v2.0_Chr7g0191481 Rosa chinensis HOM05D002693 ORTHO05D008074 4.3e-24 114.4 70 81.4
COL.COLO4_04553 Corchorus olitorius HOM05D002693 ORTHO05D008074 1.6e-23 112.5 91 63.7
SEGI_18096 Sequoiadendron giganteum HOM05D002693 ORTHO05D008074 1.6e-23 112.5 70 78.6
vmacro16697 Vaccinium macrocarpon HOM05D002693 ORTHO05D008074 2.8e-23 111.7 70 78.6
Prupe.5G159700 Prunus persica HOM05D002693 ORTHO05D008074 8.2e-23 110.2 65 80.0
BcaB02g10654 Brassica carinata HOM05D002693 ORTHO05D008074 1.1e-22 109.8 57 86.0
Ah.15g095420 Amaranthus hybridus HOM05D002693 ORTHO05D008074 1.2e-21 106.3 70 77.1
BcaNung06062 Brassica carinata HOM05D002693 ORTHO05D008074 6.5e-20 100.5 52 86.5
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 2.5e-19 98.6 52 86.5
BcaC07g39324 Brassica carinata HOM05D002693 ORTHO05D008074 7.1e-19 97.1 70 70.0
Mapoly0082s0060 Marchantia polymorpha HOM05D002693 ORTHO05D008074 7.1e-19 97.1 77 64.9
Pp3c10_2693 Physcomitrium patens HOM05D002693 ORTHO05D008074 3.5e-18 94.7 63 71.4
AagrBONN_evm.TU.Sc2ySwM_362.2434 Anthoceros agrestis HOM05D002693 ORTHO05D008074 1.0e-17 93.2 67 70.1
CBR_g22462 Chara braunii HOM05D002693 ORTHO05D008074 1.8e-17 92.4 55 78.2
CAN.G422.6 Capsicum annuum HOM05D002693 ORTHO05D008074 4.3e-16 87.8 49 75.5
Potri.014G003916 Populus trichocarpa HOM05D002693 ORTHO05D008074 2.2e-15 85.5 45 84.4
TWI23G0591 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 2.8e-15 85.1 128 43.0
Atru.chr9.991 Acer truncatum HOM05D002706 ORTHO05D003253 3.1e-14 81.6 42 85.7
PSO017G1659 Papaver somniferum HOM05D002693 ORTHO05D008074 2.6e-13 78.6 132 40.9
MCO01G793 Micromonas commoda HOM05D002693 ORTHO05D008074 3.4e-13 78.2 67 62.7
PSO478G4803 Papaver somniferum HOM05D002693 ORTHO05D008074 3.4e-13 78.2 132 40.9
PRCOL_00005469 Prasinoderma coloniale HOM05D002693 ORTHO05D008074 7.7e-13 77.0 56 67.9
SMO367G1130 Selaginella moellendorffii HOM05D002693 ORTHO05D008074 5.0e-12 74.3 70 60.0
Cre03.g206550 Chlamydomonas reinhardtii HOM05D002693 ORTHO05D008074 1.1e-11 73.2 54 68.5
TWI09G0096 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 2.5e-11 72.0 106 46.2
SMO367G1028 Selaginella moellendorffii HOM05D029637 ORTHO05D376597 4.3e-08 61.2 60 61.7
ATR0782G193 Amborella trichopoda HOM05D002693 ORTHO05D007571 8.2e-07 57.0 71 43.7
HPP92_016783 Vanilla planifolia HOM05D002693 ORTHO05D007571 3.1e-06 55.1 66 43.9
COL.COLO4_27272 Corchorus olitorius HOM05D002693 ORTHO05D007571 4.1e-06 54.7 68 44.1
QL10p005525 Quercus lobata HOM05D002693 ORTHO05D008074 6.9e-06 53.9 30 83.3
TWI74G0705 Tripterygium wilfordii HOM05D002693 ORTHO05D007571 6.9e-06 53.9 47 51.1


User provided reference genes

Program Settings