Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 9.4e-147 523.5 258 100.0
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.5e-83 313.5 255 64.3
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 3.9e-76 288.9 263 60.8
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.6e-75 285.0 260 60.8
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.3e-74 283.9 259 60.6
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.1e-74 283.1 260 60.4
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 2.1e-74 283.1 255 62.4
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 5.3e-73 278.5 255 59.6
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 9.0e-73 277.7 256 56.2
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.6e-72 276.2 258 58.5
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 7.6e-72 274.6 250 58.8
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 2.2e-71 273.1 240 60.4
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 6.4e-71 271.6 250 57.2
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 6.4e-71 271.6 209 65.1
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.1e-70 270.8 201 66.2
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.1e-70 270.8 251 57.8
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.1e-70 270.8 251 57.8
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 1.4e-70 270.4 251 57.8
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 2.1e-69 266.5 212 63.7
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 3.5e-69 265.8 234 62.8
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 1.7e-68 263.5 205 64.4
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 6.6e-68 261.5 247 56.7
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 6.6e-68 261.5 261 55.2
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 8.7e-68 261.2 262 53.8
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 8.7e-68 261.2 233 60.1
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.1e-67 260.8 212 62.7
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 1.9e-67 260.0 237 60.8
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.9e-67 260.0 240 57.9
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.3e-67 259.2 243 57.6
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 4.3e-67 258.8 235 57.9
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 5.6e-67 258.5 265 55.8
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 9.6e-67 257.7 248 56.0
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 9.6e-67 257.7 204 64.2
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 1.6e-66 256.9 250 55.6
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 6.2e-66 255.0 205 63.4
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 6.2e-66 255.0 258 56.2
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.1e-65 254.2 213 62.0
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 4.0e-65 252.3 255 55.7
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.0e-64 250.0 230 58.7
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 2.0e-64 250.0 237 54.0
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.6e-64 249.6 178 67.4
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 2.6e-64 249.6 258 53.9
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 5.8e-64 248.4 209 59.3
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 7.6e-64 248.1 253 53.4
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.7e-63 246.9 247 54.7
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 2.9e-63 246.1 200 62.5
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 3.8e-63 245.7 266 52.6
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 3.8e-63 245.7 243 57.2
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 4.9e-63 245.4 250 54.4
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 4.9e-63 245.4 233 55.8
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 4.9e-63 245.4 185 65.4
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 3.2e-62 242.7 267 51.7
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 5.5e-62 241.9 203 58.6
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 7.1e-62 241.5 263 49.4
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 9.3e-62 241.1 236 53.4
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 1.2e-61 240.7 264 53.8
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.6e-61 240.4 246 52.8
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 2.7e-61 239.6 255 53.3
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 6.0e-61 238.4 208 55.3
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 7.9e-61 238.0 259 51.7
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.0e-60 237.7 250 50.8
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 2.3e-60 236.5 261 51.7
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 3.9e-60 235.7 183 61.2
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 6.7e-60 235.0 257 52.1
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 6.7e-60 235.0 198 58.1
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 8.7e-60 234.6 212 61.3
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.1e-59 234.2 265 50.9
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 2.5e-59 233.0 212 56.1
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 5.6e-59 231.9 242 52.9
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 9.6e-59 231.1 265 50.6
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 9.6e-59 231.1 263 51.3
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 2.1e-58 229.9 260 50.4
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 4.8e-58 228.8 259 52.1
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 8.1e-58 228.0 248 50.4
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.1e-57 227.6 261 50.2
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 6.5e-55 218.4 271 49.1
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 5.5e-54 215.3 203 54.7
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 3.9e-52 209.1 142 72.5
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 6.7e-52 208.4 262 49.6
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 5.3e-49 198.7 195 50.8
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 5.3e-49 198.7 248 42.7
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.0e-48 196.8 188 53.7
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 7.6e-48 194.9 189 52.9
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.7e-47 193.7 207 47.8
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.7e-47 193.7 177 53.1
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 7.4e-43 178.3 202 45.0
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.6e-42 177.2 141 63.1
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 8.2e-42 174.9 129 68.2
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.1e-33 147.9 174 50.0
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 5.9e-32 142.1 120 56.7
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 2.5e-30 136.7 120 55.8
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 4.2e-30 136.0 213 41.8
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 7.0e-25 118.6 121 54.5
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 3.3e-19 99.8 108 50.9
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.0e-16 90.5 78 56.4
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 4.5e-16 89.4 131 45.0
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 5.9e-16 89.0 81 56.8
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 2.4e-09 67.0 63 55.6
FAN23G0455 Fragaria x ananassa HOM05D022609 ORTHO05D001690 3.2e-06 56.6 31 80.6
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 4.2e-06 56.2 84 38.1
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 7.2e-06 55.5 71 46.5


User provided reference genes

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