Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 5.4e-93 344.4 180 100.0
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 1.3e-46 190.3 148 66.2
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 4.0e-43 178.7 133 70.7
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 4.0e-43 178.7 133 70.7
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 1.2e-42 177.2 144 65.3
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 3.3e-42 175.6 141 68.8
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 1.7e-41 173.3 140 67.9
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 4.8e-41 171.8 137 65.7
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 6.3e-41 171.4 140 67.1
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.1e-40 170.6 130 70.8
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 2.4e-40 169.5 131 70.2
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 3.1e-40 169.1 141 65.2
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 4.1e-40 168.7 147 65.3
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 5.3e-40 168.3 133 65.4
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 9.1e-40 167.5 134 64.9
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 2.0e-39 166.4 142 66.9
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 4.5e-39 165.2 132 68.2
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 1.0e-38 164.1 134 63.4
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 1.0e-38 164.1 134 63.4
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 1.3e-38 163.7 140 60.0
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 1.7e-38 163.3 134 62.7
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 2.2e-38 162.9 134 64.2
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 3.8e-38 162.2 134 62.7
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 3.8e-38 162.2 138 63.0
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 5.0e-38 161.8 134 63.4
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 5.0e-38 161.8 133 63.9
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 1.1e-37 160.6 137 63.5
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 2.5e-37 159.5 139 63.3
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 3.2e-37 159.1 140 61.4
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 5.5e-37 158.3 132 65.2
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 5.5e-37 158.3 132 66.7
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 9.4e-37 157.5 128 64.1
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 1.2e-36 157.1 137 61.3
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 1.2e-36 157.1 133 63.2
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 1.6e-36 156.8 134 62.7
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 2.7e-36 156.0 133 61.7
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 2.7e-36 156.0 130 63.1
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 2.7e-36 156.0 134 59.7
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 2.7e-36 156.0 140 62.9
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 3.6e-36 155.6 134 59.7
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 3.6e-36 155.6 134 61.9
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 6.1e-36 154.8 132 63.6
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 6.1e-36 154.8 134 60.4
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 6.1e-36 154.8 134 61.2
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 6.1e-36 154.8 134 64.2
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.0e-35 154.1 137 61.3
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 1.0e-35 154.1 140 60.7
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 1.0e-35 154.1 149 57.7
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.4e-35 153.7 141 61.0
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 1.4e-35 153.7 140 62.1
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 1.8e-35 153.3 130 63.1
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 2.3e-35 152.9 140 62.1
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 5.2e-35 151.8 135 57.0
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 5.2e-35 151.8 137 59.1
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 6.8e-35 151.4 134 64.2
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.2e-34 150.6 128 64.1
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 2.6e-34 149.4 133 59.4
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.4e-34 149.1 138 59.4
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 4.4e-34 148.7 136 57.4
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 5.7e-34 148.3 142 58.5
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 7.5e-34 147.9 137 56.2
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 7.5e-34 147.9 137 56.2
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.7e-33 146.7 141 58.9
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 2.8e-33 146.0 134 59.7
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 4.8e-33 145.2 134 56.0
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 6.3e-33 144.8 132 57.6
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 8.3e-33 144.4 137 58.4
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 8.3e-33 144.4 140 60.0
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.4e-32 143.7 133 57.1
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.8e-32 143.3 131 58.0
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.8e-32 143.3 131 58.0
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 2.4e-32 142.9 183 47.0
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 4.1e-32 142.1 132 59.1
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 4.1e-32 142.1 135 57.0
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 5.4e-32 141.7 134 59.7
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 5.4e-32 141.7 134 58.2
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 1.6e-31 140.2 140 55.7
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 3.5e-31 139.0 133 61.7
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 4.5e-31 138.7 137 54.7
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 7.7e-31 137.9 129 56.6
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 2.3e-30 136.3 136 57.4
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 3.8e-30 135.6 137 55.5
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 3.8e-30 135.6 140 55.0
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 5.0e-30 135.2 137 54.0
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 5.0e-30 135.2 129 59.7
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 6.5e-30 134.8 132 60.6
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 8.6e-30 134.4 140 53.6
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 8.6e-30 134.4 137 58.4
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 1.5e-29 133.7 128 57.0
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 1.5e-29 133.7 128 57.0
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 1.5e-29 133.7 138 57.2
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 4.2e-29 132.1 138 55.8
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 4.2e-29 132.1 136 55.9
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 5.5e-29 131.7 149 49.0
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 5.5e-29 131.7 165 47.9
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 2.8e-28 129.4 132 57.6
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 6.1e-28 128.3 130 54.6
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 6.1e-28 128.3 132 53.0
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 6.1e-28 128.3 94 72.3
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.4e-27 127.1 130 55.4
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 1.4e-27 127.1 141 53.2
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 1.8e-27 126.7 129 55.0
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 2.3e-27 126.3 166 49.4
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 4.0e-27 125.6 130 55.4
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 3.4e-26 122.5 128 53.9
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 5.7e-26 121.7 103 62.1
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 7.5e-26 121.3 162 47.5
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 7.5e-26 121.3 128 55.5
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 9.8e-26 120.9 152 46.7
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 9.8e-26 120.9 152 46.7
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 1.3e-25 120.6 136 47.8
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.2e-25 119.8 137 50.4
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 2.2e-25 119.8 166 48.2
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 3.7e-25 119.0 128 50.8
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 6.3e-25 118.2 128 51.6
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.4e-24 117.1 174 46.0
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.1e-24 115.9 95 64.2
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.1e-24 115.9 95 64.2
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 4.1e-24 115.5 129 50.4
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 2.0e-23 113.2 134 53.0
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 4.5e-23 112.1 134 51.5
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.0e-22 110.9 104 56.7
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 1.3e-22 110.5 146 46.6
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.6e-20 103.6 149 47.7
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 2.1e-20 103.2 87 67.8
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 6.1e-20 101.7 94 60.6
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.8e-19 100.1 148 46.6
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 5.2e-19 98.6 140 41.4
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.5e-18 97.1 75 68.0
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 3.4e-18 95.9 149 43.6
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 3.4e-18 95.9 88 65.9
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 1.7e-17 93.6 97 56.7
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 2.9e-17 92.8 85 61.2
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 8.3e-17 91.3 138 44.2
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.4e-16 90.5 79 62.0
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 7.0e-16 88.2 80 61.2
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 1.2e-15 87.4 75 62.7
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 5.9e-15 85.1 81 58.0
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 2.3e-14 83.2 131 45.8
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 2.3e-14 83.2 130 43.8
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 8.6e-14 81.3 132 39.4
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 3.3e-13 79.3 54 72.2
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 1.6e-12 77.0 234 31.2
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 1.2e-10 70.9 66 57.6
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 2.6e-10 69.7 134 35.8
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 3.4e-10 69.3 132 34.8
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 1.9e-08 63.5 136 33.8
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 4.1e-08 62.4 50 68.0
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 5.4e-08 62.0 69 52.2
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 9.2e-08 61.2 102 43.1
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 7.8e-07 58.2 44 59.1


User provided reference genes

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