Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 2.1e-196 689.5 543 100.0
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 2.1e-140 503.4 303 81.8
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 4.6e-135 485.7 335 73.1
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 3.3e-133 479.6 338 72.5
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 1.6e-132 477.2 309 77.0
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 4.7e-132 475.7 327 73.7
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 4.7e-132 475.7 327 73.7
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 4.7e-132 475.7 331 72.5
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 1.1e-131 474.6 306 78.1
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 2.3e-131 473.4 339 72.6
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 3.1e-131 473.0 331 72.5
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 3.1e-131 473.0 335 72.5
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 4.0e-131 472.6 335 72.5
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 2.0e-130 470.3 338 71.9
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.0e-130 470.3 318 74.2
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 2.6e-130 469.9 312 76.3
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 4.4e-130 469.2 337 72.1
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 5.8e-130 468.8 314 74.5
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 9.8e-130 468.0 382 68.8
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 9.8e-130 468.0 321 75.1
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.3e-129 467.6 344 69.2
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 2.9e-129 466.5 315 74.9
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 6.4e-129 465.3 344 69.2
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 8.3e-129 464.9 319 73.4
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 8.3e-129 464.9 329 72.3
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.4e-128 464.2 384 68.2
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 2.4e-128 463.4 315 74.3
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 7.1e-128 461.8 329 72.3
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 9.2e-128 461.5 328 72.3
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 2.1e-127 460.3 334 69.5
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 6.0e-127 458.8 317 73.2
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 2.3e-126 456.8 317 71.9
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 6.6e-126 455.3 316 72.8
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 8.6e-126 454.9 341 70.1
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 1.1e-125 454.5 319 72.7
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 2.5e-125 453.4 346 68.8
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 2.5e-125 453.4 318 72.0
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 2.5e-125 453.4 311 74.3
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 3.3e-125 453.0 311 72.3
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 3.3e-125 453.0 316 73.1
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.3e-125 452.6 341 71.0
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 5.6e-125 452.2 305 72.5
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 9.5e-125 451.4 313 73.8
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.2e-124 451.1 306 72.2
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 1.2e-124 451.1 354 66.4
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 3.6e-124 449.5 309 73.8
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 3.6e-124 449.5 311 73.3
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 8.1e-124 448.4 316 71.8
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.4e-123 447.6 315 72.7
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.4e-123 447.6 309 71.2
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 2.3e-123 446.8 309 71.5
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.1e-123 446.4 325 72.9
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 8.9e-123 444.9 335 66.9
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 1.2e-122 444.5 337 68.0
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 5.8e-122 442.2 330 67.9
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 5.8e-122 442.2 333 67.9
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 7.6e-122 441.8 340 66.5
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 7.6e-122 441.8 342 67.3
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 7.6e-122 441.8 315 70.5
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.3e-121 441.0 346 67.9
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 3.7e-121 439.5 300 73.0
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 8.4e-121 438.3 301 71.4
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 8.4e-121 438.3 301 71.4
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 8.4e-121 438.3 301 71.4
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.4e-120 437.6 315 70.2
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.9e-120 437.2 335 67.5
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 3.2e-120 436.4 309 70.2
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 3.2e-120 436.4 319 69.0
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 4.1e-120 436.0 317 68.5
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 9.2e-120 434.9 316 69.0
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 9.2e-120 434.9 299 71.2
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 9.2e-120 434.9 319 68.3
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 3.5e-119 433.0 321 68.2
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 4.6e-119 432.6 329 67.8
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 7.8e-119 431.8 336 66.7
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.0e-118 431.4 319 69.0
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 3.0e-118 429.9 336 64.6
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 3.0e-118 429.9 304 70.4
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 3.0e-118 429.9 342 63.7
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 3.0e-118 429.9 323 67.8
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 4.3e-117 426.0 314 68.8
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 9.6e-117 424.9 313 69.0
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 7.6e-114 415.2 301 68.4
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 2.2e-113 413.7 311 69.1
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 4.6e-111 406.0 380 58.4
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.0e-110 404.8 310 65.8
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 1.5e-106 391.0 299 64.5
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.7e-102 377.5 309 61.5
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 5.1e-102 375.9 289 64.7
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 3.6e-100 369.8 248 71.8
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 1.8e-99 367.5 565 41.9
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.2e-96 356.7 227 75.3
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 4.8e-92 342.8 278 65.5
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 3.1e-91 340.1 241 71.8
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 1.3e-89 334.7 290 57.6
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.1e-83 315.1 222 71.2
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 1.2e-79 301.6 223 66.8
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.3e-68 265.0 178 73.0
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 2.9e-65 253.8 304 50.0
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.8e-60 237.3 181 66.3
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 9.4e-56 222.2 150 71.3
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 7.0e-51 206.1 142 70.4
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.5e-48 198.4 170 62.9
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 4.5e-42 176.8 321 36.1
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 6.4e-28 129.8 189 47.1
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 5.4e-27 126.7 93 69.9
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 7.0e-27 126.3 101 63.4
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 3.5e-26 124.0 77 76.6
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 4.6e-26 123.6 70 81.4
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 2.3e-22 111.3 79 69.6
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 6.8e-22 109.8 115 53.0
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 9.8e-21 105.9 62 82.3
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 4.9e-20 103.6 62 80.6
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 6.4e-20 103.2 60 80.0
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 4.6e-18 97.1 63 79.4
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 4.3e-16 90.5 50 82.0
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 3.6e-15 87.4 50 80.0
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 6.2e-15 86.7 72 66.7
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 5.2e-14 83.6 67 65.7
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 9.8e-13 79.3 107 37.4
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 1.6e-10 72.0 40 85.0
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 4.6e-10 70.5 58 62.1


User provided reference genes

Program Settings