Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 2.5e-75 285.4 150 100.0
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 3.9e-28 128.6 121 61.2
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 1.3e-26 123.6 126 54.0
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.8e-25 119.8 117 56.4
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 6.9e-25 117.9 118 55.9
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.5e-24 116.7 125 53.6
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 4.5e-24 115.2 117 54.7
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 1.1e-22 110.5 117 50.4
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 2.5e-22 109.4 113 54.9
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 5.5e-22 108.2 117 53.0
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 5.5e-22 108.2 122 50.8
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 3.5e-21 105.5 112 51.8
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 6.0e-21 104.8 125 45.6
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 6.0e-21 104.8 112 51.8
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 1.6e-18 96.7 112 50.9
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.6e-18 96.7 110 48.2
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 2.2e-18 96.3 119 48.7
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.8e-17 93.2 123 45.5
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 4.1e-17 92.0 114 48.2
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 1.2e-16 90.5 121 45.5
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 1.5e-16 90.1 112 48.2
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.0e-16 89.7 128 44.5
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 2.0e-16 89.7 118 49.2
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 2.9e-15 85.9 114 43.9
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 3.8e-15 85.5 125 40.0
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 1.1e-14 84.0 114 44.7
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 3.2e-14 82.4 83 55.4
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 4.2e-14 82.0 114 45.6
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 4.2e-14 82.0 123 44.7
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 4.2e-14 82.0 122 41.8
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 7.2e-14 81.3 125 39.2
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.2e-13 80.5 112 44.6
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.6e-13 80.1 114 42.1
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 1.6e-13 80.1 124 40.3
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 2.1e-13 79.7 121 40.5
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 2.7e-13 79.3 120 43.3
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 2.7e-13 79.3 120 43.3
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 1.8e-12 76.6 121 38.8
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 1.8e-12 76.6 134 38.8
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 3.0e-12 75.9 99 50.5
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 5.1e-12 75.1 115 42.6
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 6.7e-12 74.7 120 40.8
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 8.8e-12 74.3 110 42.7
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 1.5e-11 73.6 120 41.7
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 1.9e-11 73.2 125 40.0
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 3.3e-11 72.4 119 39.5
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 5.7e-11 71.6 122 41.0
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 7.4e-11 71.2 192 34.9
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 9.7e-11 70.9 105 41.9
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 9.7e-11 70.9 119 37.8
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 9.7e-11 70.9 85 48.2
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 1.3e-10 70.5 122 38.5
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 1.7e-10 70.1 114 39.5
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.7e-10 70.1 131 35.1
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 2.2e-10 69.7 123 38.2
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 2.8e-10 69.3 118 37.3
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 2.8e-10 69.3 79 50.6
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 4.8e-10 68.6 116 39.7
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 8.2e-10 67.8 83 51.8
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 8.2e-10 67.8 115 39.1
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.4e-09 67.0 153 34.6
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.8e-09 66.6 153 34.0
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 3.1e-09 65.9 91 40.7
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.2e-08 63.9 159 31.4
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 1.5e-08 63.5 120 36.7
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 3.4e-08 62.4 120 33.3
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 1.0e-07 60.8 114 38.6
TPR.G39060 Trifolium pratense HOM05D007214 ORTHO05D008907 2.2e-07 59.7 146 33.6
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 2.9e-07 59.3 125 35.2
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 2.9e-07 59.3 120 35.0
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 2.9e-07 59.3 119 34.5
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 3.8e-07 58.9 114 33.3
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 3.8e-07 58.9 120 37.5
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 5.0e-07 58.5 129 34.1
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 3.2e-06 55.8 128 34.4
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 4.2e-06 55.5 115 35.7
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 4.2e-06 55.5 71 43.7
Hund13295 Selenicereus undatus HOM05D007214 ORTHO05D008907 5.5e-06 55.1 143 32.9


User provided reference genes

Program Settings