Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.2426 Acer truncatum HOM05D008353 ORTHO05D001895 2.8e-64 248.4 123 100.0
Atru.chr13.1025 Acer truncatum HOM05D008353 ORTHO05D001895 5.6e-41 171.0 118 66.9
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 2.8e-40 168.7 122 67.2
Atru.chr6.125 Acer truncatum HOM05D002599 ORTHO05D001895 4.9e-29 131.3 87 70.1
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 1.2e-27 126.7 120 50.8
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 7.9e-27 124.0 118 50.0
Manes.07G022000 Manihot esculenta HOM05D008353 ORTHO05D001895 9.0e-23 110.5 124 47.6
Manes.07G021800 Manihot esculenta HOM05D008353 ORTHO05D001895 2.0e-22 109.4 124 46.0
Potri.004G220550 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.6e-22 109.0 120 45.0
Potri.004G220700 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.6e-22 109.0 120 45.0
Potri.004G220400 Populus trichocarpa HOM05D008353 ORTHO05D001895 3.4e-22 108.6 120 45.0
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 5.9e-22 107.8 118 45.8
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 1.9e-20 102.8 120 45.8
Sabra01G0167300 Salix brachista HOM05D008353 ORTHO05D001895 9.3e-20 100.5 120 43.3
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 2.1e-19 99.4 117 42.7
Sabra01G0166900 Salix brachista HOM05D008353 ORTHO05D001895 6.1e-19 97.8 120 43.3
Manes.10G124100 Manihot esculenta HOM05D008353 ORTHO05D001895 1.8e-18 96.3 117 45.3
Potri.003G011200 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.3e-18 95.9 116 43.1
Manes.10G123900 Manihot esculenta HOM05D008353 ORTHO05D001895 5.1e-18 94.7 118 45.8
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 8.8e-18 94.0 117 42.7
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 1.1e-17 93.6 120 42.5
COL.COLO4_11746 Corchorus olitorius HOM05D008353 ORTHO05D001895 9.1e-15 84.0 121 39.7
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 5.9e-14 81.3 120 40.0
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 7.7e-14 80.9 120 40.0
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.0e-13 78.2 113 39.8
Gohir.A03G192300 Gossypium hirsutum HOM05D008353 ORTHO05D001895 6.5e-13 77.8 123 37.4
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 6.5e-13 77.8 119 38.7
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.5e-13 77.4 122 40.2
Gohir.D02G213200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 1.1e-12 77.0 120 38.3
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-12 77.0 118 39.0
Gorai.005G241100 Gossypium raimondii HOM05D008353 ORTHO05D001895 2.5e-12 75.9 120 37.5
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-12 75.9 118 31.4
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-12 75.9 120 37.5
COL.COLO4_11748 Corchorus olitorius HOM05D008353 ORTHO05D001895 3.2e-12 75.5 116 37.9
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.2e-12 75.5 115 38.3
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.2e-12 75.1 117 37.6
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-12 75.1 115 35.7
Gohir.D02G213100 Gossypium hirsutum HOM05D008353 ORTHO05D001895 7.2e-12 74.3 123 37.4
Gorai.005G241000 Gossypium raimondii HOM05D008353 ORTHO05D001895 7.2e-12 74.3 123 37.4
Gohir.A10G055250 Gossypium hirsutum HOM05D008353 ORTHO05D011820 9.4e-12 73.9 91 37.4
COL.COLO4_11747 Corchorus olitorius HOM05D008353 ORTHO05D011820 1.2e-11 73.6 121 35.5
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-11 73.6 123 36.6
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-11 73.6 122 33.6
Thecc.02G091900 Theobroma cacao HOM05D008353 ORTHO05D011820 1.6e-11 73.2 120 35.8
Gorai.011G060900 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.1e-11 72.8 119 32.8
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-11 72.8 118 32.2
Gohir.A03G192200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 4.7e-11 71.6 120 37.5
Gohir.D10G057000 Gossypium hirsutum HOM05D008353 ORTHO05D011820 7.9e-11 70.9 119 32.8
Potri.003G018400 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.9e-11 70.9 118 29.7
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-10 69.7 117 35.0
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.8e-10 69.7 117 35.0
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-10 69.7 122 32.8
Gohir.A10G055200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.3e-10 69.3 91 35.2
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 3.0e-10 68.9 114 33.3
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-10 68.9 112 35.7
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.9e-10 68.6 123 37.4
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-10 68.6 121 34.7
Thecc.07G072800 Theobroma cacao HOM05D008353 ORTHO05D001895 3.9e-10 68.6 125 31.2
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-10 68.6 118 31.4
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.1e-10 68.2 117 37.6
Gorai.011G061300 Gossypium raimondii HOM05D008353 ORTHO05D011820 5.1e-10 68.2 119 31.9
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-10 68.2 118 34.7
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-10 68.2 115 34.8
Gohir.A10G054800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 6.7e-10 67.8 121 35.5
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-09 67.0 117 36.8
Gohir.D10G057200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.1e-09 67.0 119 31.1
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-09 67.0 117 36.8
Gorai.011G060600 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.1e-09 67.0 119 32.8
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-09 66.6 121 35.5
Gorai.011G061000 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.5e-09 66.6 91 34.1
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-09 66.2 114 34.2
Gohir.D10G056800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.0e-09 66.2 119 32.8
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-09 65.9 114 33.3
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.6e-09 65.9 125 35.2
Gohir.1Z049336 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.3e-09 65.5 91 33.0
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-09 65.5 123 36.6
Gohir.D10G057100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.3e-09 65.5 91 33.0
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.3e-09 65.5 114 33.3
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.4e-09 65.1 111 34.2
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.7e-09 64.7 120 30.8
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.4e-09 64.3 123 35.8
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.4e-09 64.3 117 32.5
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 7.4e-09 64.3 114 34.2
Gohir.A10G054950 Gossypium hirsutum HOM05D008353 ORTHO05D011820 9.7e-09 63.9 119 29.4
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.7e-09 63.9 120 32.5
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.7e-09 63.9 120 30.8
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.3e-08 63.5 107 34.6
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-08 62.8 114 35.1
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.8e-08 61.6 119 34.5
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.8e-08 61.6 112 32.1
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.3e-08 61.2 119 31.1
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.3e-08 61.2 116 28.4
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.3e-08 61.2 115 32.2
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.2e-08 60.8 119 35.3
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-08 60.8 111 30.6
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 1.1e-07 60.5 105 34.3
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-07 60.5 114 29.8
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 1.1e-07 60.5 115 31.3
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-07 60.1 116 26.7
Gorai.008G022100 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.4e-07 60.1 93 30.1
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.8e-07 59.7 115 28.7
Gohir.D12G021800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.8e-07 59.7 93 30.1
Gorai.011G061100 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.8e-07 59.7 119 30.3
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-07 59.7 108 35.2
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-07 59.7 114 32.5
Thecc.02G091600 Theobroma cacao HOM05D008353 ORTHO05D001895 1.8e-07 59.7 113 33.6
Gohir.D02G213400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-07 59.3 93 37.6
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-07 59.3 110 30.0
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-07 59.3 111 30.6
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 2.4e-07 59.3 114 32.5
Thecc.02G091700 Theobroma cacao HOM05D008353 ORTHO05D011820 2.4e-07 59.3 120 29.2
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 3.1e-07 58.9 112 28.6
Gohir.A10G055100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.1e-07 58.9 91 31.9
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-07 58.9 115 30.4
Gohir.A10G055150 Gossypium hirsutum HOM05D008353 ORTHO05D011820 4.1e-07 58.5 91 30.8
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.1e-07 58.5 115 27.8
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.1e-07 58.5 115 27.8
Gohir.A10G055066 Gossypium hirsutum HOM05D008353 ORTHO05D011820 5.3e-07 58.2 119 31.1
Gohir.D10G057133 Gossypium hirsutum HOM05D008353 ORTHO05D011820 5.3e-07 58.2 119 29.4
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 5.3e-07 58.2 111 33.3
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 9.1e-07 57.4 114 30.7
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 9.1e-07 57.4 113 30.1
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 9.1e-07 57.4 116 31.9
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-06 56.2 123 31.7
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-06 55.8 109 31.2
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.6e-06 55.8 119 30.3
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.4e-06 55.5 92 37.0
Sabra01G0164100 Salix brachista HOM05D002599 ORTHO05D001895 3.4e-06 55.5 118 26.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-06 55.5 107 27.1
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 4.5e-06 55.1 122 30.3
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 5.9e-06 54.7 108 25.9
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 5.9e-06 54.7 113 31.9
Gorai.011G060700 Gossypium raimondii HOM05D008353 ORTHO05D011820 7.7e-06 54.3 91 30.8
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.7e-06 54.3 112 33.0


User provided reference genes

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