Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.2319 Acer truncatum HOM05D008310 ORTHO05D010460 2.7e-57 224.9 102 100.0
Ciclev10013501m.g Citrus clementina HOM05D008310 ORTHO05D010460 1.8e-29 132.5 95 65.3
Gohir.D04G135000 Gossypium hirsutum HOM05D008310 ORTHO05D010460 8.9e-24 113.6 96 58.3
Thecc.05G008400 Theobroma cacao HOM05D008310 ORTHO05D010460 2.0e-23 112.5 91 59.3
Cfa017132 Carpinus fangiana HOM05D008310 ORTHO05D010460 4.4e-23 111.3 108 50.0
Gorai.012G118600 Gossypium raimondii HOM05D008310 ORTHO05D010460 7.5e-23 110.5 96 57.3
Gohir.A04G095056 Gossypium hirsutum HOM05D008310 ORTHO05D010460 2.2e-22 109.0 96 56.2
Dinv10267 Davidia involucrata HOM05D008310 ORTHO05D010460 1.1e-21 106.7 93 55.9
Manes.09G110500 Manihot esculenta HOM05D008310 ORTHO05D010460 1.1e-21 106.7 91 49.5
CiPaw.10G160100 Carya illinoinensis HOM05D008310 ORTHO05D010460 7.0e-21 104.0 91 50.5
FAN02G0122 Fragaria x ananassa HOM05D008310 ORTHO05D010460 7.0e-21 104.0 96 47.9
Prupe.6G283600 Prunus persica HOM05D008310 ORTHO05D010460 9.2e-21 103.6 98 51.0
FAN05G0762 Fragaria x ananassa HOM05D008310 ORTHO05D010460 1.6e-20 102.8 96 46.9
FAN05G3091 Fragaria x ananassa HOM05D008310 ORTHO05D010460 1.6e-20 102.8 96 46.9
FvH4_6g10780 Fragaria vesca HOM05D008310 ORTHO05D010460 1.7e-19 99.4 99 46.5
FAN14G2720 Fragaria x ananassa HOM05D008310 ORTHO05D010460 1.7e-19 99.4 99 46.5
FAN09G2600 Fragaria x ananassa HOM05D008310 ORTHO05D010460 2.9e-19 98.6 96 46.9
FAN09G4723 Fragaria x ananassa HOM05D008310 ORTHO05D010460 2.9e-19 98.6 96 46.9
TWI74G1202 Tripterygium wilfordii HOM05D008310 ORTHO05D010460 2.9e-19 98.6 99 48.5
Dinv08424 Davidia involucrata HOM05D008310 ORTHO05D010460 3.8e-19 98.2 95 52.6
Glyma.07G155100 Glycine max HOM05D008310 ORTHO05D010460 3.8e-19 98.2 91 52.7
TAR623G0221 Trochodendron aralioides HOM05D008310 ORTHO05D010460 6.6e-19 97.4 87 51.7
Medtr7g069970 Medicago truncatula HOM05D008310 ORTHO05D010460 1.1e-18 96.7 91 51.6
Hma1.2p1_0501F.1_g167530 Hydrangea macrophylla HOM05D008310 ORTHO05D010460 1.9e-18 95.9 93 50.5
RcHm_v2.0_Chr3g0461821 Rosa chinensis HOM05D008310 ORTHO05D010460 2.5e-18 95.5 96 47.9
Sabra06G0080200 Salix brachista HOM05D008310 ORTHO05D010460 7.3e-18 94.0 91 51.6
Aqoxy1G01310 Aquilegia oxysepala HOM05D008310 ORTHO05D010460 9.5e-18 93.6 97 48.5
ECA247G2349 Erigeron canadensis HOM05D008310 ORTHO05D010460 2.1e-17 92.4 92 46.7
Lj3g0016268 Lotus japonicus HOM05D008310 ORTHO05D010460 2.1e-17 92.4 92 52.2
TPR.G6627 Trifolium pratense HOM05D008310 ORTHO05D010460 2.8e-17 92.0 92 48.9
Potri.006G103800 Populus trichocarpa HOM05D008310 ORTHO05D010460 3.6e-17 91.7 91 53.8
Phvul.008G093800 Phaseolus vulgaris HOM05D008310 ORTHO05D010460 2.3e-16 89.0 91 46.2
arahy.Tifrunner.gnm1.ann1.HA647U Arachis hypogaea HOM05D008310 ORTHO05D010460 4.0e-16 88.2 95 45.3
Glyma.18G205700 Glycine max HOM05D008310 ORTHO05D010460 6.8e-16 87.4 89 49.4
Psat3g124760 Pisum sativum HOM05D008310 ORTHO05D010460 8.9e-16 87.0 77 53.2
arahy.Tifrunner.gnm1.ann1.U260GH Arachis hypogaea HOM05D008310 ORTHO05D010460 3.4e-15 85.1 96 45.8
Potri.016G124300 Populus trichocarpa HOM05D008310 ORTHO05D010460 6.4e-14 80.9 94 52.1
Actinidia32536 Actinidia chinensis HOM05D008310 ORTHO05D010460 8.3e-14 80.5 81 49.4
Eucgr.A00610 Eucalyptus grandis HOM05D008310 ORTHO05D010460 2.4e-13 79.0 95 42.1
CsaV3_4G026500 Cucumis sativus L. HOM05D008310 ORTHO05D010460 1.2e-12 76.6 91 41.8
Rhsim05G0223900 Rhododendron simsii HOM05D008310 ORTHO05D010460 3.5e-12 75.1 127 34.6
Actinidia20758 Actinidia chinensis HOM05D008310 ORTHO05D010460 6.0e-12 74.3 82 46.3
Lj1g0025992 Lotus japonicus HOM05D008310 ORTHO05D010460 1.0e-11 73.6 95 45.3
HanXRQChr10g0287151 Helianthus annuus HOM05D008310 ORTHO05D010460 2.3e-11 72.4 88 44.3
DCAR_028878 Daucus carota HOM05D008310 ORTHO05D010460 1.5e-10 69.7 93 40.9
Sed0025498 Sechium edule HOM05D008310 ORTHO05D010460 1.5e-10 69.7 90 45.6
Glyma.01G124400 Glycine max HOM05D008310 ORTHO05D010460 5.6e-10 67.8 92 38.0
Glyma.03G050200 Glycine max HOM05D008310 ORTHO05D010460 9.5e-10 67.0 81 39.5
Solyc09g015430.3 Solanum lycopersicum HOM05D008310 ORTHO05D010460 9.5e-10 67.0 78 43.6
arahy.Tifrunner.gnm1.ann1.21T5B8 Arachis hypogaea HOM05D008310 ORTHO05D010460 2.1e-09 65.9 96 41.7
Sopen09g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-08 63.2 68 44.1
arahy.Tifrunner.gnm1.ann1.MKIS3D Arachis hypogaea HOM05D008310 ORTHO05D010460 3.1e-08 62.0 96 39.6
Nitab4.5_0004676g0010 Nicotiana tabacum HOM05D008310 ORTHO05D010460 1.2e-07 60.1 90 40.0
CDE07G0647 Ceratophyllum demersum HOM05D008310 ORTHO05D010460 1.5e-07 59.7 84 41.7


User provided reference genes

Program Settings