Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.0e-298 1029.2 511 100.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 7.9e-238 827.0 507 77.3
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 9.9e-233 810.1 504 74.6
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 8.4e-232 807.0 496 75.4
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.1e-231 803.9 516 73.6
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.6e-230 802.7 516 73.4
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 3.5e-230 801.6 505 74.3
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.1e-229 797.7 507 74.0
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.1e-229 797.7 513 73.1
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.6e-227 792.7 505 73.7
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.8e-227 792.0 509 73.1
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 5.3e-226 787.7 506 72.7
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 4.5e-225 784.6 494 74.3
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.3e-224 783.1 509 72.3
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-224 782.7 499 73.3
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 4.9e-224 781.2 499 72.5
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 8.4e-224 780.4 493 74.2
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-223 779.6 499 72.3
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-223 779.6 499 72.3
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.9e-223 779.2 499 73.1
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.5e-223 777.7 499 73.3
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 6.0e-222 774.2 499 73.1
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.0e-221 773.5 500 72.4
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 3.9e-221 771.5 517 72.7
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.7e-221 770.8 511 70.8
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 3.3e-220 768.5 506 71.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 4.3e-220 768.1 514 70.4
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 5.7e-220 767.7 495 72.9
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 5.7e-220 767.7 509 69.9
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 2.1e-219 765.8 515 71.1
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 2.1e-219 765.8 516 70.5
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 2.8e-219 765.4 524 69.7
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 3.7e-219 765.0 500 71.8
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 6.3e-219 764.2 495 72.7
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 9.0e-218 760.4 506 70.2
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 3.4e-217 758.4 501 69.9
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 7.6e-217 757.3 506 69.2
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.0e-216 756.9 501 69.7
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.3e-216 756.5 501 69.7
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.3e-216 756.5 501 70.1
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.9e-216 755.4 501 69.9
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.9e-215 752.7 507 69.2
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 2.5e-215 752.3 516 69.8
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.5e-215 752.3 501 68.9
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 7.2e-215 750.7 504 69.2
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 9.3e-215 750.4 495 71.5
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 9.3e-215 750.4 507 70.4
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.1e-214 749.2 507 70.4
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.8e-213 746.1 500 69.8
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 3.9e-213 745.0 500 69.8
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 3.9e-213 745.0 505 69.3
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 5.1e-213 744.6 484 71.3
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 8.7e-213 743.8 516 69.2
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 1.1e-212 743.4 502 70.7
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.9e-212 742.7 517 68.7
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 2.5e-212 742.3 506 68.4
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 4.3e-212 741.5 500 69.6
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 5.7e-212 741.1 545 65.7
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 2.2e-211 739.2 501 68.3
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.2e-211 739.2 513 68.2
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 8.2e-211 737.3 501 68.3
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 8.2e-211 737.3 501 68.3
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.1e-210 736.9 507 68.6
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.4e-210 736.5 508 68.5
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 1.4e-210 736.5 493 69.2
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.8e-210 736.1 511 69.1
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 3.1e-210 735.3 501 67.9
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 4.1e-210 734.9 501 67.9
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 5.3e-210 734.6 512 67.0
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.6e-206 723.0 493 70.6
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 2.7e-206 722.2 505 68.7
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.9e-206 720.7 498 68.9
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.9e-206 720.7 498 68.9
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 5.1e-205 718.0 517 66.0
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.5e-204 716.5 507 69.2
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 5.3e-202 708.0 571 60.8
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 9.1e-202 707.2 515 65.2
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 4.5e-201 704.9 517 64.0
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.4e-199 699.9 536 62.7
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.4e-199 699.9 532 63.0
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 7.2e-199 697.6 512 65.4
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 2.7e-198 695.7 514 63.6
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 7.9e-198 694.1 524 63.4
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 5.7e-196 688.0 455 69.9
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 9.1e-194 680.6 522 62.3
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 4.5e-193 678.3 522 61.9
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 3.7e-187 658.7 517 63.2
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.5e-183 646.7 440 70.2
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.5e-183 646.7 528 58.9
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.2e-183 645.2 488 63.1
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 7.5e-180 634.4 495 63.4
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 4.8e-179 631.7 439 67.4
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 1.4e-178 630.2 500 64.6
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.8e-178 629.8 501 59.9
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.2e-177 627.1 353 80.7
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.1e-175 620.5 508 58.9
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 2.8e-174 615.9 474 64.3
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.3e-173 612.8 500 59.6
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 6.3e-171 604.7 510 59.6
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.3e-168 597.0 510 59.8
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.0e-160 570.9 411 65.9
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 3.3e-159 565.8 411 68.1
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.3e-128 464.2 404 55.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 3.3e-127 459.5 405 53.6
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.9e-122 443.7 398 53.5
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.3e-120 437.6 454 49.1
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.0e-116 423.7 261 72.8
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.6e-110 404.1 386 49.2
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 8.8e-72 275.4 175 74.3
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 3.2e-66 256.9 162 68.5
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 2.3e-56 224.2 120 88.3
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 1.3e-43 181.8 111 73.9
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 1.0e-35 155.6 319 30.4
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 2.7e-28 131.0 130 52.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.8e-16 91.7 86 53.5
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 7.1e-13 79.7 59 59.3
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 9.6e-10 69.3 73 43.8
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 9.6e-10 69.3 73 43.8
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 9.6e-10 69.3 73 43.8
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 1.1e-08 65.9 120 29.2
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 9.0e-08 62.8 58 37.9


User provided reference genes

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