Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.2223 Acer truncatum HOM05D000054 ORTHO05D000286 6.0e-33 143.7 76 100.0
Cpa.g.sc163.18 Carica papaya HOM05D000054 ORTHO05D000286 1.1e-15 86.3 76 63.2
Manes.09G104100 Manihot esculenta HOM05D000054 ORTHO05D000286 1.5e-12 75.9 76 63.2
TWI53G0942 Tripterygium wilfordii HOM05D000054 ORTHO05D000286 1.5e-12 75.9 76 59.2
TAR623G1463 Trochodendron aralioides HOM05D000054 ORTHO05D000286 4.4e-12 74.3 75 56.0
Potri.016G114800 Populus trichocarpa HOM05D000054 ORTHO05D000286 2.9e-11 71.6 76 55.3
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 3.8e-11 71.2 75 57.3
CANSAT35G0144 Cannabis sativa HOM05D000054 ORTHO05D000286 6.4e-11 70.5 77 57.1
PGR031G1419 Punica granatum HOM05D000054 ORTHO05D000286 1.1e-10 69.7 75 54.7
CSS0003864 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000286 1.4e-10 69.3 76 60.5
Dinv23091 Davidia involucrata HOM05D000054 ORTHO05D000286 1.4e-10 69.3 76 59.2
CSS0009206 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000286 5.4e-10 67.4 76 53.9
Lj3C954T8 Lonicera japonica HOM05D000054 ORTHO05D000286 1.2e-09 66.2 76 53.9
Duzib093G1122 Durio zibethinus HOM05D000054 ORTHO05D000286 2.7e-09 65.1 55 70.9
Thecc.05G017700 Theobroma cacao HOM05D000054 ORTHO05D000286 4.6e-09 64.3 76 53.9
Solyc10g076760.3 Solanum lycopersicum HOM05D000054 ORTHO05D000286 6.0e-09 63.9 76 53.9
PGSC0003DMG400019125 Solanum tuberosum HOM05D000054 ORTHO05D000286 7.8e-09 63.5 76 52.6
Sopen10g028400 Solanum pennellii HOM05D000054 ORTHO05D000286 1.0e-08 63.2 76 53.9
Ciclev10011991m.g Citrus clementina HOM05D000054 ORTHO05D000286 1.3e-08 62.8 63 63.5
Sabra16G0110700 Salix brachista HOM05D000054 ORTHO05D000286 2.3e-08 62.0 77 50.6
Nitab4.5_0000335g0150 Nicotiana tabacum HOM05D000054 ORTHO05D000286 3.0e-08 61.6 75 53.3
Glyma.07G148500 Glycine max HOM05D000054 ORTHO05D000286 3.9e-08 61.2 76 51.3
Hma1.2p1_0362F.1_g136130 Hydrangea macrophylla HOM05D000054 ORTHO05D000286 3.9e-08 61.2 76 50.0
Nitab4.5_0009144g0010 Nicotiana tabacum HOM05D000054 ORTHO05D000286 5.1e-08 60.8 79 53.2
Peaxi162Scf00141g00336 Petunia axillaris HOM05D000054 ORTHO05D000286 5.1e-08 60.8 76 53.9
Glyma.18G199600 Glycine max HOM05D000054 ORTHO05D000286 6.6e-08 60.5 76 50.0
Peaxi162Scf00014g00613 Petunia axillaris HOM05D000054 ORTHO05D000286 6.6e-08 60.5 79 50.6
Haze_20990 Corylus avellana HOM05D000054 ORTHO05D000286 8.7e-08 60.1 76 46.1
Lj1g0003345 Lotus japonicus HOM05D000054 ORTHO05D000286 8.7e-08 60.1 76 55.3
Manes.08G091300 Manihot esculenta HOM05D000054 ORTHO05D000286 1.1e-07 59.7 76 56.6
Nitab4.5_0000119g0170 Nicotiana tabacum HOM05D000054 ORTHO05D000286 1.1e-07 59.7 79 51.9
Nn2g11453 Nelumbo nucifera HOM05D000054 ORTHO05D000286 1.5e-07 59.3 76 47.4
CAN.G1087.5 Capsicum annuum HOM05D000054 ORTHO05D000286 2.5e-07 58.5 79 50.6
MELO3C009175.2 Cucumis melo HOM05D000054 ORTHO05D000286 2.5e-07 58.5 77 46.8
COL.COLO4_14548 Corchorus olitorius HOM05D000054 ORTHO05D000286 3.3e-07 58.2 76 50.0
Actinidia05369 Actinidia chinensis HOM05D000054 ORTHO05D000286 4.3e-07 57.8 76 53.9
CsaV3_3G033880 Cucumis sativus L. HOM05D000054 ORTHO05D000286 5.6e-07 57.4 77 46.8
Nitab4.5_0005776g0040 Nicotiana tabacum HOM05D000054 ORTHO05D000286 5.6e-07 57.4 76 51.3
PGSC0003DMG400008493 Solanum tuberosum HOM05D000054 ORTHO05D000286 5.6e-07 57.4 76 50.0
Rhsim04G0128600 Rhododendron simsii HOM05D000054 ORTHO05D000286 7.3e-07 57.0 78 52.6
Gohir.A01G228000 Gossypium hirsutum HOM05D000054 ORTHO05D000286 9.6e-07 56.6 76 51.3
VMungo1383G3060 Vigna mungo HOM05D000054 ORTHO05D000286 9.6e-07 56.6 76 46.1
DCAR_024026 Daucus carota HOM05D000054 ORTHO05D000286 1.6e-06 55.8 76 52.6
Eucgr.A00508 Eucalyptus grandis HOM05D000054 ORTHO05D000286 1.6e-06 55.8 76 46.1
Gohir.D01G217800 Gossypium hirsutum HOM05D000054 ORTHO05D000286 1.6e-06 55.8 76 51.3
Gorai.002G264200 Gossypium raimondii HOM05D000054 ORTHO05D000286 1.6e-06 55.8 76 51.3
arahy.Tifrunner.gnm1.ann1.LJP9Y0 Arachis hypogaea HOM05D000054 ORTHO05D000286 2.1e-06 55.5 76 50.0
Dinv05606 Davidia involucrata HOM05D000054 ORTHO05D000286 2.1e-06 55.5 52 59.6
arahy.Tifrunner.gnm1.ann1.LFQD4L Arachis hypogaea HOM05D000054 ORTHO05D000286 2.8e-06 55.1 76 50.0
ClCG10G022050 Citrullus lanatus HOM05D000054 ORTHO05D000286 2.8e-06 55.1 78 47.4
ECA248G0558 Erigeron canadensis HOM05D000054 ORTHO05D000286 2.8e-06 55.1 78 46.2
Solyc09g014460.1 Solanum lycopersicum HOM05D000054 ORTHO05D000286 3.6e-06 54.7 76 47.4
HanXRQChr01g0005971 Helianthus annuus HOM05D000054 ORTHO05D000286 4.7e-06 54.3 76 46.1
vmacro08852 Vaccinium macrocarpon HOM05D000054 ORTHO05D000286 4.7e-06 54.3 76 48.7


User provided reference genes

Program Settings