Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.2011 Acer truncatum HOM05D003692 ORTHO05D004295 2.2e-54 215.3 104 100.0
Potri.006G088000 Populus trichocarpa HOM05D003692 ORTHO05D004295 4.5e-39 164.5 101 78.2
Dinv35578 Davidia involucrata HOM05D003692 ORTHO05D004295 4.9e-38 161.0 87 87.4
ClCG04G008060 Citrullus lanatus HOM05D003692 ORTHO05D004295 2.4e-37 158.7 103 74.8
Duzib128G0550 Durio zibethinus HOM05D003692 ORTHO05D004295 2.4e-37 158.7 100 77.0
Actinidia11270 Actinidia chinensis HOM05D003692 ORTHO05D004295 4.2e-37 157.9 101 75.2
Haze_20825 Corylus avellana HOM05D003692 ORTHO05D004295 9.3e-37 156.8 103 71.8
Cfa017343 Carpinus fangiana HOM05D003692 ORTHO05D004295 2.7e-36 155.2 107 72.9
TWI38G1706 Tripterygium wilfordii HOM05D003692 ORTHO05D004295 2.7e-36 155.2 101 75.2
Sabra06G0067100 Salix brachista HOM05D003692 ORTHO05D004295 3.5e-36 154.8 101 75.2
COL.COLO4_14767 Corchorus olitorius HOM05D003692 ORTHO05D004295 4.6e-36 154.5 100 74.0
Potri.016G100500 Populus trichocarpa HOM05D003692 ORTHO05D004295 4.6e-36 154.5 101 73.3
QL07p030873 Quercus lobata HOM05D003692 ORTHO05D004295 4.6e-36 154.5 106 71.7
Actinidia26484 Actinidia chinensis HOM05D003692 ORTHO05D004295 1.0e-35 153.3 101 75.2
Ciclev10011911m.g Citrus clementina HOM05D003692 ORTHO05D004295 1.3e-35 152.9 103 75.7
CsaV3_4G025150 Cucumis sativus L. HOM05D003692 ORTHO05D004295 3.9e-35 151.4 107 70.1
Lj2A91G57 Lonicera japonica HOM05D003692 ORTHO05D004295 5.1e-35 151.0 93 77.4
CAN.G947.5 Capsicum annuum HOM05D003692 ORTHO05D004295 8.7e-35 150.2 102 70.6
Dinv37149 Davidia involucrata HOM05D003692 ORTHO05D004295 8.7e-35 150.2 87 82.8
Solyc09g011030.3 Solanum lycopersicum HOM05D003692 ORTHO05D004295 8.7e-35 150.2 98 74.5
PGSC0003DMG400008824 Solanum tuberosum HOM05D003692 ORTHO05D004295 2.5e-34 148.7 105 70.5
CiPaw.09G195400 Carya illinoinensis HOM05D003692 ORTHO05D004295 3.3e-34 148.3 102 74.5
Manes.09G092685 Manihot esculenta HOM05D003692 ORTHO05D004295 5.6e-34 147.5 101 72.3
Sopen09g005760 Solanum pennellii HOM05D003692 ORTHO05D004295 5.6e-34 147.5 98 73.5
vmacro20176 Vaccinium macrocarpon HOM05D003692 ORTHO05D004295 7.4e-34 147.1 103 71.8
CSS0021952 Camellia sinensis var. sinensis HOM05D003692 ORTHO05D004295 1.3e-33 146.4 102 73.5
MD04G1131900 Malus domestica HOM05D003692 ORTHO05D004295 1.3e-33 146.4 104 73.1
Sed0012536 Sechium edule HOM05D003692 ORTHO05D004295 2.1e-33 145.6 101 71.3
MBI05_g35626_MAGBIO Magnolia biondii HOM05D003692 ORTHO05D004295 4.8e-33 144.4 97 73.2
TAR623G0629 Trochodendron aralioides HOM05D003692 ORTHO05D004295 4.8e-33 144.4 103 68.0
Glyma.01G103200 Glycine max HOM05D003692 ORTHO05D004295 1.4e-32 142.9 101 68.3
Lj3g0027938 Lotus japonicus HOM05D003692 ORTHO05D004295 1.4e-32 142.9 102 68.6
Nitab4.5_0003394g0020 Nicotiana tabacum HOM05D003692 ORTHO05D004295 1.4e-32 142.9 88 78.4
MELO3C003143.2 Cucumis melo HOM05D003692 ORTHO05D004295 1.8e-32 142.5 83 79.5
QL07p030140 Quercus lobata HOM05D003692 ORTHO05D004295 1.8e-32 142.5 79 82.3
Thecc.05G036000 Theobroma cacao HOM05D003692 ORTHO05D004295 2.4e-32 142.1 91 73.6
Nitab4.5_0000705g0070 Nicotiana tabacum HOM05D003692 ORTHO05D004295 4.0e-32 141.4 88 77.3
Peaxi162Scf00527g00735 Petunia axillaris HOM05D003692 ORTHO05D004295 5.3e-32 141.0 87 75.9
Rhsim05G0194700 Rhododendron simsii HOM05D003692 ORTHO05D004295 5.3e-32 141.0 102 69.6
Cc06_g02380 Coffea canephora HOM05D003692 ORTHO05D004295 6.9e-32 140.6 102 68.6
TAR560G0002 Trochodendron aralioides HOM05D003692 ORTHO05D004295 6.9e-32 140.6 102 67.6
Prupe.6G258500 Prunus persica HOM05D003692 ORTHO05D004295 1.2e-31 139.8 111 69.4
DCAR_012112 Daucus carota HOM05D003692 ORTHO05D004295 3.4e-31 138.3 89 77.5
MSTRG.19074 Avicennia marina HOM05D003692 ORTHO05D004295 5.8e-31 137.5 87 72.4
Gohir.A04G083600 Gossypium hirsutum HOM05D003692 ORTHO05D004295 5.8e-31 137.5 87 73.6
RcHm_v2.0_Chr3g0462931 Rosa chinensis HOM05D003692 ORTHO05D004295 5.8e-31 137.5 87 79.3
Glyma.03G070400 Glycine max HOM05D003692 ORTHO05D004295 7.6e-31 137.1 101 66.3
MD12G1145000 Malus domestica HOM05D003692 ORTHO05D004295 7.6e-31 137.1 110 64.5
CANSAT35G0909 Cannabis sativa HOM05D003692 ORTHO05D004295 1.7e-30 136.0 103 68.0
Gorai.012G105200 Gossypium raimondii HOM05D003692 ORTHO05D004295 1.7e-30 136.0 87 73.6
VMungo0331G1001 Vigna mungo HOM05D003692 ORTHO05D004295 2.2e-30 135.6 101 65.3
Oeu023073.1 Olea europaea HOM05D003692 ORTHO05D004295 3.8e-30 134.8 91 75.8
Aqoxy1G00886 Aquilegia oxysepala HOM05D003692 ORTHO05D004295 8.4e-30 133.7 95 68.4
FAN02G3395 Fragaria x ananassa HOM05D003692 ORTHO05D004295 8.4e-30 133.7 102 68.6
FvH4_6g11350 Fragaria vesca HOM05D003692 ORTHO05D004295 1.1e-29 133.3 99 70.7
FAN14G0506 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.1e-29 133.3 99 70.7
FAN14G3612 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.1e-29 133.3 99 70.7
Eucgr.A01287 Eucalyptus grandis HOM05D003692 ORTHO05D004295 1.4e-29 132.9 103 65.0
FAN09G2852 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.4e-29 132.9 99 70.7
Hund07755 Selenicereus undatus HOM05D003692 ORTHO05D004295 1.4e-29 132.9 99 66.7
arahy.Tifrunner.gnm1.ann1.R5ZI8K Arachis hypogaea HOM05D003692 ORTHO05D004295 1.9e-29 132.5 97 68.0
Gohir.D04G122300 Gossypium hirsutum HOM05D003692 ORTHO05D004295 1.9e-29 132.5 87 71.3
MSTRG.10251 Avicennia marina HOM05D003692 ORTHO05D004295 3.2e-29 131.7 87 72.4
Oeu001856.1 Olea europaea HOM05D003692 ORTHO05D004295 4.2e-29 131.3 90 73.3
Phvul.010G011500 Phaseolus vulgaris HOM05D003692 ORTHO05D004295 4.2e-29 131.3 103 64.1
THA.LOC104816257 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 4.2e-29 131.3 88 76.1
CAN.G597.5 Capsicum annuum HOM05D003692 ORTHO05D004295 5.5e-29 131.0 102 65.7
Sc07g0007060 Simmondsia chinensis HOM05D003692 ORTHO05D004295 9.3e-29 130.2 107 62.6
TPR.G5579 Trifolium pratense HOM05D003692 ORTHO05D004295 9.3e-29 130.2 82 74.4
arahy.Tifrunner.gnm1.ann1.C3169U Arachis hypogaea HOM05D003692 ORTHO05D004295 1.2e-28 129.8 99 66.7
FAN05G1146 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.2e-28 129.8 99 69.7
Ca_11500_v3 Cicer arietinum L. HOM05D003692 ORTHO05D004295 1.6e-28 129.4 85 71.8
Lalb_Chr12g0209541 Lupinus albus HOM05D003692 ORTHO05D004295 6.0e-28 127.5 90 67.8
Psat7g237280 Pisum sativum HOM05D003692 ORTHO05D004295 6.0e-28 127.5 82 74.4
Hma1.2p1_0877F.1_g231720 Hydrangea macrophylla HOM05D003692 ORTHO05D004295 1.0e-27 126.7 86 73.3
Cpa.g.sc40.66 Carica papaya HOM05D003692 ORTHO05D004295 1.8e-27 125.9 99 67.7
Medtr4g021570 Medicago truncatula HOM05D003692 ORTHO05D004295 3.0e-27 125.2 86 72.1
Lalb_Chr07g0192991 Lupinus albus HOM05D003692 ORTHO05D004295 1.1e-26 123.2 91 67.0
Ah.12g059970 Amaranthus hybridus HOM05D003692 ORTHO05D004295 1.5e-26 122.9 102 62.7
PGR031G2878 Punica granatum HOM05D003692 ORTHO05D004295 1.5e-26 122.9 102 60.8
EL10As1g23134 Beta vulgaris HOM05D003692 ORTHO05D004295 1.9e-26 122.5 105 63.8
AUR62042383 Chenopodium quinoa HOM05D003692 ORTHO05D004295 4.3e-26 121.3 104 60.6
AUR62043522 Chenopodium quinoa HOM05D003692 ORTHO05D004295 9.6e-26 120.2 105 60.0
SGA_v2.0_scaffold94G28572 Striga asiatica HOM05D003692 ORTHO05D004295 1.3e-25 119.8 88 65.9
CAN.G397.48 Capsicum annuum HOM05D003692 ORTHO05D004295 2.1e-25 119.0 64 85.9
SEGI_14146 Sequoiadendron giganteum HOM05D003692 ORTHO05D004295 8.2e-25 117.1 105 60.0
SEGI_33439 Sequoiadendron giganteum HOM05D003692 ORTHO05D004295 8.2e-25 117.1 105 60.0
Sp3g07730 Schrenkiella parvula HOM05D003692 ORTHO05D004295 1.5e-23 112.8 85 74.1
Thhalv10020978m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 2.6e-23 112.1 85 74.1
Oeu006893.1 Olea europaea HOM05D003692 ORTHO05D004295 5.8e-23 110.9 63 77.8
Os03g0822700 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 5.8e-23 110.9 93 63.4
BcaC05g29519 Brassica carinata HOM05D003692 ORTHO05D004295 7.6e-23 110.5 85 71.8
BcaC05g29662 Brassica carinata HOM05D003692 ORTHO05D004295 7.6e-23 110.5 85 71.8
C05p58660 Brassica napus HOM05D003692 ORTHO05D004295 7.6e-23 110.5 85 71.8
BolC5t34516H Brassica oleracea HOM05D003692 ORTHO05D004295 7.6e-23 110.5 85 71.8
unitig_8.g4279 Utricularia gibba HOM05D003692 ORTHO05D004295 7.6e-23 110.5 83 66.3
CSS0018872 Camellia sinensis var. sinensis HOM05D003692 ORTHO05D004295 1.0e-22 110.2 74 73.0
CARHR083710 Cardamine hirsuta HOM05D003692 ORTHO05D004295 1.3e-22 109.8 86 70.9
TAR369G0528 Trochodendron aralioides HOM05D003692 ORTHO05D004295 3.8e-22 108.2 80 66.2
Aa31LG3G1840 Aethionema arabicum HOM05D003692 ORTHO05D004295 5.0e-22 107.8 84 70.2
BraA05t22745Z Brassica rapa HOM05D003692 ORTHO05D004295 6.5e-22 107.5 85 69.4
AL3G20500 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 8.4e-22 107.1 85 68.2
Carub.0003s0846 Capsella rubella HOM05D003692 ORTHO05D004295 1.4e-21 106.3 85 68.2
SGA_v2.0_scaffold126G33762 Striga asiatica HOM05D003692 ORTHO05D004295 1.4e-21 106.3 88 61.4
THA.LOC104823413 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 1.4e-21 106.3 88 60.2
Zm00001eb062800 Zea mays HOM05D003692 ORTHO05D004295 1.4e-21 106.3 87 65.5
AT3G09350 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 4.2e-21 104.8 85 68.2
PSO513G0124 Papaver somniferum HOM05D003692 ORTHO05D004295 5.5e-21 104.4 88 60.2
HPP92_006643 Vanilla planifolia HOM05D003692 ORTHO05D004295 9.3e-21 103.6 97 58.8
RcHm_v2.0_Chr7g0180681 Rosa chinensis HOM05D003692 ORTHO05D004295 2.1e-20 102.4 61 75.4
PSO339G0014 Papaver somniferum HOM05D003692 ORTHO05D004295 2.7e-20 102.1 88 60.2
Carub.0005s2038 Capsella rubella HOM05D003692 ORTHO05D004295 3.5e-20 101.7 85 58.8
FAN13G1535 Fragaria x ananassa HOM05D003692 ORTHO05D004295 3.5e-20 101.7 61 77.0
Actinidia05324 Actinidia chinensis HOM05D003692 ORTHO05D004295 4.6e-20 101.3 69 72.5
FvH4_5g15390 Fragaria vesca HOM05D003692 ORTHO05D004295 1.0e-19 100.1 61 75.4
FAN18G0330 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.0e-19 100.1 61 75.4
Lj3A965G75 Lonicera japonica HOM05D003692 ORTHO05D004295 1.8e-19 99.4 70 68.6
ATR0559G081 Amborella trichopoda HOM05D003692 ORTHO05D004295 2.3e-19 99.0 89 58.4
AL5G34790 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 3.0e-19 98.6 85 57.6
AT3G53800 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 3.0e-19 98.6 85 57.6
BcaC01g04230 Brassica carinata HOM05D003692 ORTHO05D004295 3.0e-19 98.6 81 65.4
C03p43660 Brassica napus HOM05D003692 ORTHO05D004295 3.0e-19 98.6 81 65.4
BolC3t16634H Brassica oleracea HOM05D003692 ORTHO05D004295 3.0e-19 98.6 81 65.4
FAN08G2733 Fragaria x ananassa HOM05D003692 ORTHO05D004295 3.9e-19 98.2 61 75.4
BcaB01g00236 Brassica carinata HOM05D003692 ORTHO05D004295 1.9e-18 95.9 85 57.6
BcaB03g11607 Brassica carinata HOM05D003692 ORTHO05D004295 2.5e-18 95.5 81 64.2
A03p36010 Brassica napus HOM05D003692 ORTHO05D004295 2.5e-18 95.5 81 64.2
BraA03t12773Z Brassica rapa HOM05D003692 ORTHO05D004295 2.5e-18 95.5 81 64.2
Sp5g08580 Schrenkiella parvula HOM05D003692 ORTHO05D004295 5.7e-18 94.4 85 57.6
HanXRQChr01g0003311 Helianthus annuus HOM05D003692 ORTHO05D004295 9.7e-18 93.6 84 60.7
BcaC07g39737 Brassica carinata HOM05D003692 ORTHO05D004295 1.6e-17 92.8 85 56.5
C08p29100 Brassica napus HOM05D003692 ORTHO05D004295 1.6e-17 92.8 85 56.5
Thhalv10010482m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 2.2e-17 92.4 85 56.5
A09p46790 Brassica napus HOM05D003692 ORTHO05D004295 2.8e-17 92.0 85 56.5
BolC8t50511H Brassica oleracea HOM05D003692 ORTHO05D004295 2.8e-17 92.0 85 56.5
BraA09t40139Z Brassica rapa HOM05D003692 ORTHO05D004295 2.8e-17 92.0 85 56.5
ECA248G3146 Erigeron canadensis HOM05D003692 ORTHO05D004295 2.8e-17 92.0 87 57.5
HanXRQChr13g0406761 Helianthus annuus HOM05D003692 ORTHO05D004295 8.2e-17 90.5 88 59.1
Oeu010100.1 Olea europaea HOM05D003692 ORTHO05D004295 3.1e-16 88.6 70 61.4
Os03g0271400 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 3.1e-16 88.6 99 49.5
CDE04G2827 Ceratophyllum demersum HOM05D003692 ORTHO05D004295 5.3e-16 87.8 95 50.5
ECA248G3834 Erigeron canadensis HOM05D003692 ORTHO05D004295 5.3e-16 87.8 86 59.3
ECA248G3804 Erigeron canadensis HOM05D003692 ORTHO05D004295 2.0e-15 85.9 87 58.6
Zm00001eb012160 Zea mays HOM05D003692 ORTHO05D004295 2.6e-15 85.5 96 54.2
Migut.J00308 Erythranthe guttata HOM05D003692 ORTHO05D004295 4.5e-15 84.7 86 55.8
Lsat_1_v5_gn_5_154881 Lactuca sativa HOM05D003692 ORTHO05D004295 1.3e-14 83.2 91 51.6
SMO302G0018 Selaginella moellendorffii HOM05D003692 ORTHO05D004295 1.3e-14 83.2 85 52.9
AagrBONN_evm.TU.Sc2ySwM_368.3385 Anthoceros agrestis HOM05D003692 ORTHO05D004295 2.2e-14 82.4 88 50.0
Pp3c16_19440 Physcomitrium patens HOM05D003692 ORTHO05D004295 2.2e-14 82.4 87 52.9
Pp3c5_26180 Physcomitrium patens HOM05D003692 ORTHO05D004295 6.5e-14 80.9 86 48.8
BcaB04g18532 Brassica carinata HOM05D003692 ORTHO05D004295 8.2e-09 63.9 67 53.7
Mapoly0070s0083 Marchantia polymorpha HOM05D003692 ORTHO05D004295 4.5e-07 58.2 82 40.2


User provided reference genes

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