Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 8.1e-138 493.8 263 100.0
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 2.8e-98 362.5 269 72.9
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 7.7e-96 354.4 266 71.8
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 2.2e-95 352.8 266 72.2
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 3.8e-95 352.1 264 72.0
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 5.0e-95 351.7 272 70.2
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.4e-94 350.1 269 71.7
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.9e-94 349.7 267 71.5
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.6e-93 346.7 269 71.0
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.6e-93 346.7 267 71.2
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 2.1e-93 346.3 178 93.8
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 3.6e-93 345.5 270 71.5
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 2.3e-92 342.8 274 68.6
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 2.3e-92 342.8 269 70.3
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 2.0e-91 339.7 179 92.7
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 3.3e-91 339.0 180 90.6
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 7.4e-91 337.8 235 74.5
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 1.3e-90 337.0 180 90.6
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 3.7e-90 335.5 180 90.6
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 4.8e-90 335.1 269 69.9
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 4.8e-90 335.1 257 69.3
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 8.2e-90 334.3 180 89.4
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 8.2e-90 334.3 256 69.1
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 1.1e-89 334.0 267 70.4
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.4e-89 333.6 266 68.4
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 3.1e-89 332.4 180 90.0
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 3.1e-89 332.4 269 66.5
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 7.0e-89 331.3 265 67.5
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 7.0e-89 331.3 263 68.4
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 9.1e-89 330.9 262 68.3
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 1.6e-88 330.1 265 66.4
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 2.6e-88 329.3 273 66.7
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 3.5e-88 328.9 286 66.4
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 3.5e-88 328.9 280 66.4
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 3.5e-88 328.9 263 68.4
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 4.5e-88 328.6 251 68.9
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 5.9e-88 328.2 250 72.8
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 5.9e-88 328.2 266 67.3
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 7.7e-88 327.8 262 67.6
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 7.7e-88 327.8 196 82.1
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.0e-87 327.4 211 79.1
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.0e-87 327.4 211 79.1
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.7e-87 326.6 299 64.9
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.9e-87 325.9 256 66.8
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 3.8e-87 325.5 257 68.9
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 5.0e-87 325.1 270 66.7
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 6.5e-87 324.7 269 65.4
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 6.5e-87 324.7 259 66.8
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.5e-86 323.6 270 67.4
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 4.2e-86 322.0 275 66.2
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.2e-86 322.0 278 64.7
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 2.7e-85 319.3 263 67.7
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 2.7e-85 319.3 177 89.3
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.7e-85 319.3 265 67.5
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 4.7e-85 318.5 268 65.7
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 8.0e-85 317.8 268 63.8
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 1.0e-84 317.4 178 85.4
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.0e-84 317.4 268 66.0
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 4.0e-84 315.5 177 88.1
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 4.0e-84 315.5 274 67.9
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 8.8e-84 314.3 177 86.4
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 7.5e-83 311.2 177 85.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 9.7e-83 310.8 180 85.6
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 2.8e-82 309.3 264 65.5
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.1e-81 307.4 179 83.8
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 1.6e-80 303.5 256 65.2
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 2.7e-80 302.8 176 84.7
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.7e-79 300.1 177 81.4
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.2e-79 299.7 263 62.0
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 2.9e-79 299.3 243 64.2
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 6.5e-79 298.1 177 79.7
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 3.2e-78 295.8 255 63.9
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 3.2e-78 295.8 178 80.9
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 2.1e-77 293.1 267 64.0
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.7e-77 292.7 222 68.0
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 4.0e-76 288.9 275 60.4
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 3.4e-75 285.8 268 59.0
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 4.4e-75 285.4 190 81.1
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.7e-74 283.5 180 78.9
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.8e-74 282.7 229 68.6
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.1e-73 280.8 179 73.7
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.1e-73 280.8 178 79.2
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.2e-69 267.3 241 61.4
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.5e-67 260.4 262 56.1
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.0e-67 260.0 175 72.0
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 8.3e-66 254.6 178 68.5
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 4.1e-65 252.3 250 55.2
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 9.5e-62 241.1 228 61.4
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.5e-59 233.8 123 93.5
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 5.7e-59 231.9 118 94.1
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 2.2e-58 229.9 118 90.7
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.2e-51 207.6 203 56.7
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 2.7e-48 196.4 213 55.4
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 5.6e-46 188.7 180 56.1
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 8.1e-45 184.9 197 54.3
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 4.9e-42 175.6 94 88.3
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.4e-36 156.8 129 65.9
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 3.0e-31 139.8 75 88.0
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 5.8e-27 125.6 65 87.7
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.2e-19 101.3 56 89.3
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 2.4e-12 77.0 53 67.9


User provided reference genes

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