Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 0.0e+00 1125.9 570 100.0
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 1.9e-253 879.0 570 79.6
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 9.6e-253 876.7 570 77.9
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 5.5e-248 860.9 570 77.4
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 7.2e-248 860.5 570 77.2
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 2.1e-247 859.0 568 77.8
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 3.5e-247 858.2 554 79.4
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 4.6e-247 857.8 575 76.2
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.0e-246 856.7 566 77.7
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 1.1e-245 853.2 501 83.8
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 9.7e-245 850.1 548 82.1
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.6e-244 849.4 571 76.0
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 2.8e-244 848.6 576 74.8
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 2.8e-244 848.6 570 76.0
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 4.5e-242 841.3 504 82.9
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 5.9e-242 840.9 572 75.3
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 1.3e-241 839.7 535 78.3
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 5.0e-241 837.8 501 83.6
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 3.2e-240 835.1 566 75.4
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 9.4e-240 833.6 551 77.0
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 4.6e-239 831.2 500 82.8
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 1.4e-238 829.7 569 75.0
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 2.0e-237 825.9 504 80.4
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 3.3e-237 825.1 556 76.3
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 4.3e-237 824.7 576 74.5
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 1.7e-236 822.8 500 81.4
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 4.8e-236 821.2 582 71.3
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 1.2e-234 816.6 506 80.8
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 5.9e-234 814.3 557 75.0
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 2.5e-232 808.9 571 73.4
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 2.5e-232 808.9 502 79.5
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 1.2e-231 806.6 581 71.8
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 6.1e-231 804.3 561 73.8
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 7.9e-231 803.9 567 72.0
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.0e-230 803.5 564 73.2
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 1.1e-229 800.0 492 80.1
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 2.0e-229 799.3 507 78.9
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 7.4e-229 797.3 569 72.1
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 2.8e-228 795.4 573 72.1
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 3.7e-228 795.0 566 71.7
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 6.3e-228 794.3 572 71.7
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 1.4e-227 793.1 571 70.4
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 2.0e-226 789.3 574 71.6
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 2.0e-226 789.3 497 78.9
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 2.6e-226 788.9 556 71.9
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 3.5e-226 788.5 501 79.0
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.0e-225 786.9 504 77.8
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 5.0e-225 784.6 573 70.9
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 6.5e-225 784.3 558 72.4
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 6.5e-225 784.3 539 73.7
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 3.2e-224 781.9 557 71.3
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 3.2e-224 781.9 557 71.3
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 3.2e-224 781.9 557 71.3
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 3.2e-224 781.9 573 70.0
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 7.2e-224 780.8 537 73.7
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 7.2e-224 780.8 497 77.7
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 1.6e-223 779.6 451 86.0
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 1.6e-223 779.6 565 70.4
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 2.7e-223 778.9 562 71.0
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.0e-222 776.9 562 70.8
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.4e-222 776.5 572 69.2
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 1.8e-222 776.2 502 75.7
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 3.0e-222 775.4 561 72.5
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 4.0e-222 775.0 505 78.8
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 5.2e-222 774.6 465 81.1
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 3.7e-220 768.5 555 69.7
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.1e-219 766.9 507 74.8
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 1.8e-219 766.1 554 70.9
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.1e-219 765.4 555 70.8
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 2.0e-218 762.7 507 74.4
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 1.3e-217 760.0 566 67.8
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.5e-216 756.5 555 68.5
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 1.9e-216 756.1 584 67.3
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 2.5e-216 755.7 547 71.1
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 3.2e-216 755.4 559 67.8
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 7.2e-216 754.2 475 77.5
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 2.7e-215 752.3 581 67.3
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 2.7e-215 752.3 508 72.8
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 2.7e-215 752.3 542 70.5
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 1.0e-214 750.4 542 70.3
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 1.0e-214 750.4 576 67.9
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 1.4e-214 750.0 495 74.9
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.8e-214 749.6 505 75.6
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 2.3e-214 749.2 560 68.0
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 3.0e-214 748.8 540 70.7
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 1.2e-213 746.9 496 73.6
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 1.5e-213 746.5 508 72.2
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 4.4e-213 745.0 493 74.4
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 1.8e-211 739.6 557 67.7
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 5.4e-211 738.0 444 83.1
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 9.1e-211 737.3 439 83.1
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 5.9e-210 734.6 495 72.7
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 2.9e-209 732.3 545 68.3
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 5.0e-209 731.5 550 67.8
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 7.5e-205 717.6 550 67.1
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 5.0e-201 704.9 504 71.8
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 4.3e-200 701.8 545 66.6
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 1.2e-199 700.3 509 67.4
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 1.7e-196 689.9 573 64.4
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.6e-194 683.3 409 80.2
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 1.5e-192 676.8 483 72.3
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 9.5e-192 674.1 443 77.4
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 1.0e-190 670.6 559 59.7
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 7.5e-189 664.5 504 65.5
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 1.3e-188 663.7 570 64.0
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.7e-188 663.3 504 65.3
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.9e-188 662.5 504 64.7
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 5.8e-181 638.3 462 67.1
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 8.3e-180 634.4 478 64.0
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 1.9e-179 633.3 477 63.9
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 2.1e-178 629.8 492 64.4
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 1.5e-173 613.6 493 65.7
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 2.6e-165 586.3 476 57.1
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 2.2e-164 583.2 474 59.7
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 1.9e-163 580.1 481 60.7
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.0e-161 574.3 479 58.2
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.1e-154 550.1 448 65.6
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.3e-145 520.0 372 73.1
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 2.8e-143 513.1 474 52.7
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 7.1e-139 498.4 319 78.1
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 4.3e-136 489.2 328 75.3
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 3.3e-128 463.0 492 49.0
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 1.1e-126 458.0 500 48.8
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 1.9e-75 287.7 241 63.5
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.0e-60 238.8 479 31.1
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 1.1e-57 228.8 145 77.9
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 3.8e-39 167.2 431 27.8
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 3.8e-39 167.2 115 71.3
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 1.6e-29 135.2 72 87.5
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 4.5e-24 117.1 80 77.5
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 1.5e-19 102.1 64 78.1
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 5.7e-19 100.1 415 24.8
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 2.5e-14 84.7 484 25.4
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 1.9e-06 58.5 28 92.9


User provided reference genes

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