Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1371 Acer truncatum HOM05D003781 ORTHO05D004299 1.6e-202 709.1 353 100.0
Duzib093G1220 Durio zibethinus HOM05D003781 ORTHO05D004299 3.6e-125 452.2 358 65.6
TWI74G1316 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 3.1e-124 449.1 358 63.7
Ciclev10012131m.g Citrus clementina HOM05D003781 ORTHO05D004299 9.3e-121 437.6 355 64.5
Gohir.D09G131000 Gossypium hirsutum HOM05D003781 ORTHO05D004299 9.3e-121 437.6 359 63.0
Sabra16G0070900 Salix brachista HOM05D003781 ORTHO05D004299 4.6e-120 435.3 373 62.7
Sabra16G0073100 Salix brachista HOM05D003781 ORTHO05D004299 4.6e-120 435.3 373 62.7
Gorai.006G149700 Gossypium raimondii HOM05D003781 ORTHO05D004299 1.3e-119 433.7 359 62.7
Potri.016G070800 Populus trichocarpa HOM05D003781 ORTHO05D004299 2.3e-119 433.0 364 62.9
Dinv31756 Davidia involucrata HOM05D003781 ORTHO05D004299 7.3e-118 427.9 360 63.3
TWI53G0607 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 2.4e-116 422.9 358 60.6
Haze_20190 Corylus avellana HOM05D003781 ORTHO05D004299 9.0e-116 421.0 355 62.5
Thecc.05G103800 Theobroma cacao HOM05D003781 ORTHO05D004299 5.8e-115 418.3 357 64.1
GSVIVG01029568001 Vitis vinifera HOM05D003781 ORTHO05D004299 9.9e-115 417.5 371 58.8
QL04p046781 Quercus lobata HOM05D003781 ORTHO05D004299 8.4e-114 414.5 363 60.6
Dinv12337 Davidia involucrata HOM05D003781 ORTHO05D004299 1.4e-113 413.7 361 61.8
Manes.08G033100 Manihot esculenta HOM05D003781 ORTHO05D004299 1.9e-113 413.3 361 59.3
MD12G1039800 Malus domestica HOM05D003781 ORTHO05D004299 4.2e-113 412.1 364 60.7
GSVIVG01037869001 Vitis vinifera HOM05D003781 ORTHO05D004299 5.4e-113 411.8 371 58.8
QL07p036815 Quercus lobata HOM05D003781 ORTHO05D004299 9.3e-113 411.0 359 61.3
Prupe.7G095100 Prunus persica HOM05D003781 ORTHO05D004299 1.6e-112 410.2 362 62.4
TAR633G0070 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.0e-111 407.5 358 61.2
Cpa.g.sc10.172 Carica papaya HOM05D003781 ORTHO05D004299 1.5e-110 403.7 355 60.0
QL04p047257 Quercus lobata HOM05D003781 ORTHO05D004299 1.5e-110 403.7 364 61.0
TAR636G1975 Trochodendron aralioides HOM05D003781 ORTHO05D004299 4.8e-109 398.7 355 60.3
Haze_19697 Corylus avellana HOM05D003781 ORTHO05D004299 8.1e-109 397.9 351 61.5
MD14G1038400 Malus domestica HOM05D003781 ORTHO05D004299 2.4e-108 396.4 366 58.7
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 2.6e-107 392.9 340 59.7
CiPaw.09G020700 Carya illinoinensis HOM05D003781 ORTHO05D004299 1.3e-106 390.6 364 57.7
vmacro07475 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 6.4e-106 388.3 361 59.6
RcHm_v2.0_Chr3g0475861 Rosa chinensis HOM05D003781 ORTHO05D004299 1.6e-104 383.6 363 57.3
Actinidia03891 Actinidia chinensis HOM05D003781 ORTHO05D004299 3.5e-104 382.5 363 58.7
Actinidia04001 Actinidia chinensis HOM05D003781 ORTHO05D004299 3.5e-104 382.5 363 58.7
Lalb_Chr18g0056351 Lupinus albus HOM05D003781 ORTHO05D004299 3.5e-104 382.5 358 55.9
FvH4_6g20270 Fragaria vesca HOM05D003781 ORTHO05D004299 7.9e-104 381.3 361 57.1
FAN14G3039 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.3e-103 380.6 361 56.8
PGR142G3230 Punica granatum HOM05D003781 ORTHO05D004299 1.3e-103 380.6 367 56.9
RcHm_v2.0_Chr1g0331051 Rosa chinensis HOM05D003781 ORTHO05D004299 1.8e-103 380.2 364 56.9
A08p18640 Brassica napus HOM05D003781 ORTHO05D004299 8.7e-103 377.9 351 57.8
DCAR_009179 Daucus carota HOM05D003781 ORTHO05D004299 5.6e-102 375.2 359 57.1
FAN02G2206 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.6e-101 373.6 362 56.1
Sp7g29260 Schrenkiella parvula HOM05D003781 ORTHO05D004299 3.7e-101 372.5 353 58.6
Nn2g14295 Nelumbo nucifera HOM05D003781 ORTHO05D004299 4.8e-101 372.1 364 55.2
FAN09G0267 Fragaria x ananassa HOM05D003781 ORTHO05D004299 6.2e-101 371.7 394 52.8
Peaxi162Scf00586g00012 Petunia axillaris HOM05D003781 ORTHO05D004299 6.9e-100 368.2 350 54.6
FAN05G1631 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.2e-99 367.5 391 52.7
FAN05G5379 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.2e-99 367.5 391 52.7
Thhalv10027115m.g Eutrema salsugineum HOM05D003781 ORTHO05D004299 5.8e-99 365.2 354 57.3
BraA08t33827Z Brassica rapa HOM05D003781 ORTHO05D004299 1.0e-98 364.4 354 56.5
CsaV3_3G037920 Cucumis sativus L. HOM05D003781 ORTHO05D004299 1.0e-98 364.4 359 56.0
MELO3C009536.2 Cucumis melo HOM05D003781 ORTHO05D004299 3.8e-98 362.5 357 55.2
AT4G31400 Arabidopsis thaliana HOM05D003781 ORTHO05D004299 2.5e-97 359.8 352 56.8
A03p60680 Brassica napus HOM05D003781 ORTHO05D004299 2.5e-97 359.8 356 56.2
C07p58580 Brassica napus HOM05D003781 ORTHO05D004299 2.5e-97 359.8 355 56.1
BolC7t46313H Brassica oleracea HOM05D003781 ORTHO05D004299 3.2e-97 359.4 356 55.3
EL10Ac5g12476 Beta vulgaris HOM05D003781 ORTHO05D004299 4.2e-97 359.0 365 54.5
CANSAT01G0129 Cannabis sativa HOM05D003781 ORTHO05D004299 5.5e-97 358.6 362 52.5
Nitab4.5_0001122g0140 Nicotiana tabacum HOM05D003781 ORTHO05D004299 7.1e-97 358.2 351 54.4
BraA03t15109Z Brassica rapa HOM05D003781 ORTHO05D004299 9.3e-97 357.8 356 56.5
CARHR239280 Cardamine hirsuta HOM05D003781 ORTHO05D004299 1.6e-96 357.1 352 55.7
PGSC0003DMG400021351 Solanum tuberosum HOM05D003781 ORTHO05D004299 2.7e-96 356.3 362 53.0
THA.LOC104809956 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 2.7e-96 356.3 362 53.6
Carub.0007s0916 Capsella rubella HOM05D003781 ORTHO05D004299 4.6e-96 355.5 356 55.6
PGR142G3605 Punica granatum HOM05D003781 ORTHO05D004299 4.6e-96 355.5 351 54.4
Solyc01g007160.4 Solanum lycopersicum HOM05D003781 ORTHO05D004299 4.6e-96 355.5 360 52.2
Sopen01g003140 Solanum pennellii HOM05D003781 ORTHO05D004299 6.0e-96 355.1 354 52.8
Lj1g0015362 Lotus japonicus HOM05D003781 ORTHO05D004299 1.0e-95 354.4 351 55.8
CiPaw.10G017000 Carya illinoinensis HOM05D003781 ORTHO05D004299 1.3e-95 354.0 359 56.3
Lsat_1_v5_gn_1_58161 Lactuca sativa HOM05D003781 ORTHO05D004299 1.3e-95 354.0 359 54.3
BcaNung04576 Brassica carinata HOM05D003781 ORTHO05D004299 2.3e-95 353.2 356 55.1
CAN.G170.93 Capsicum annuum HOM05D003781 ORTHO05D004299 3.0e-95 352.8 351 52.4
Nitab4.5_0000020g0070 Nicotiana tabacum HOM05D003781 ORTHO05D004299 5.1e-95 352.1 351 54.1
Cc06_g06510 Coffea canephora HOM05D003781 ORTHO05D004299 6.7e-95 351.7 357 51.8
AUR62036398 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.1e-94 350.9 353 54.4
AUR62030753 Chenopodium quinoa HOM05D003781 ORTHO05D004299 5.7e-94 348.6 370 52.7
Sopen01g052480 Solanum pennellii HOM05D003781 ORTHO05D004299 5.7e-94 348.6 355 51.5
ECA248G2654 Erigeron canadensis HOM05D003781 ORTHO05D004299 1.6e-93 347.1 368 50.8
Hund10883 Selenicereus undatus HOM05D003781 ORTHO05D004299 1.6e-93 347.1 351 53.8
HanXRQChr01g0025751 Helianthus annuus HOM05D003781 ORTHO05D004299 4.8e-93 345.5 354 50.6
Phvul.001G195300 Phaseolus vulgaris HOM05D003781 ORTHO05D004299 4.8e-93 345.5 353 51.3
PSO541G6247 Papaver somniferum HOM05D003781 ORTHO05D004299 6.3e-93 345.1 356 53.1
Aa31LG2G18950 Aethionema arabicum HOM05D003781 ORTHO05D004299 1.4e-92 344.0 352 54.5
Ca_03587_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 2.4e-92 343.2 356 53.4
Actinidia31110 Actinidia chinensis HOM05D003781 ORTHO05D004299 3.1e-92 342.8 355 53.0
Ah.04g152350 Amaranthus hybridus HOM05D003781 ORTHO05D000148 3.1e-92 342.8 352 52.8
Lsat_1_v5_gn_6_113040 Lactuca sativa HOM05D003781 ORTHO05D004299 3.1e-92 342.8 375 52.0
PSO675G8110 Papaver somniferum HOM05D003781 ORTHO05D004299 4.1e-92 342.4 356 52.8
Hma1.2p1_0064F.1_g034690 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 9.0e-92 341.3 332 56.6
Solyc01g110330.3 Solanum lycopersicum HOM05D003781 ORTHO05D004299 2.6e-91 339.7 269 59.5
Migut.J00706 Erythranthe guttata HOM05D003781 ORTHO05D004299 3.4e-91 339.3 358 51.1
Medtr0036s0040 Medicago truncatula HOM05D003781 ORTHO05D004299 1.3e-90 337.4 356 52.8
Sed0000357 Sechium edule HOM05D003781 ORTHO05D004299 1.7e-90 337.0 266 62.0
Eucgr.K02618 Eucalyptus grandis HOM05D003781 ORTHO05D004299 2.9e-90 336.3 291 57.7
MBI04_g47396_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 3.8e-90 335.9 372 50.5
Oeu034092.2 Olea europaea HOM05D003781 ORTHO05D004299 3.8e-90 335.9 354 52.5
arahy.Tifrunner.gnm1.ann1.GQX3NW Arachis hypogaea HOM05D003781 ORTHO05D004299 1.9e-89 333.6 362 51.1
Hma1.2p1_0381F.1_g140000 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 1.9e-89 333.6 353 51.0
SalBow8G0162 Salvia bowleyana HOM05D003781 ORTHO05D004299 1.9e-89 333.6 351 51.3
arahy.Tifrunner.gnm1.ann1.WYX60D Arachis hypogaea HOM05D003781 ORTHO05D004299 2.5e-89 333.2 366 50.5
Ca_17838_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 4.2e-89 332.4 354 52.8
VMungo0464G1804 Vigna mungo HOM05D003781 ORTHO05D004299 5.5e-89 332.0 351 50.1
MSTRG.5897 Avicennia marina HOM05D003781 ORTHO05D004299 1.2e-88 330.9 355 53.2
MBI04_g43653_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 1.2e-88 330.9 367 50.7
Glyma.19G200100 Glycine max HOM05D003781 ORTHO05D004299 6.1e-88 328.6 351 49.3
VMungo1383G2961 Vigna mungo HOM05D003781 ORTHO05D004299 7.9e-88 328.2 352 48.6
Glyma.19G199100 Glycine max HOM05D003781 ORTHO05D004299 1.8e-87 327.0 351 49.3
Psat5g299360 Pisum sativum HOM05D003781 ORTHO05D004299 3.0e-87 326.2 356 50.3
SGA_v2.0_scaffold13G06629 Striga asiatica HOM05D003781 ORTHO05D004299 6.7e-87 325.1 355 49.9
Rhsim03G0064900 Rhododendron simsii HOM05D003781 ORTHO05D004299 8.7e-87 324.7 366 54.4
Aqoxy1G00670 Aquilegia oxysepala HOM05D003781 ORTHO05D004299 3.3e-86 322.8 357 51.0
Sed0026509 Sechium edule HOM05D003781 ORTHO05D004299 1.6e-85 320.5 356 49.7
Gohir.A09G134500 Gossypium hirsutum HOM05D003781 ORTHO05D004299 6.3e-85 318.5 360 51.9
AL7G20660 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 4.1e-84 315.8 312 56.1
ClCG10G018370 Citrullus lanatus HOM05D003781 ORTHO05D004299 1.2e-83 314.3 319 53.9
Oeu052621.2 Olea europaea HOM05D003781 ORTHO05D004299 3.4e-83 312.8 268 57.5
C03p88000 Brassica napus HOM05D003781 ORTHO05D004299 4.5e-83 312.4 354 50.6
HanXRQChr16g0532941 Helianthus annuus HOM05D003781 ORTHO05D004299 5.9e-83 312.0 264 57.6
Lj2A35G43 Lonicera japonica HOM05D003781 ORTHO05D004299 1.7e-82 310.5 287 56.1
Medtr2g102470 Medicago truncatula HOM05D003781 ORTHO05D004299 2.9e-82 309.7 354 50.0
CSS0048701 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 3.2e-81 306.2 354 49.4
BcaB03g12691 Brassica carinata HOM05D003781 ORTHO05D004299 4.2e-81 305.8 313 53.7
unitig_26.g10109 Utricularia gibba HOM05D003781 ORTHO05D004299 7.9e-80 301.6 357 47.1
Rhsim09G0141200 Rhododendron simsii HOM05D003781 ORTHO05D004299 6.7e-79 298.5 396 45.7
BolC3t21111H Brassica oleracea HOM05D003781 ORTHO05D004299 8.8e-79 298.1 355 50.7
CDE06G0061 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 1.1e-78 297.7 365 46.8
TPR.G37223 Trifolium pratense HOM05D003781 ORTHO05D004299 2.2e-77 293.5 353 47.6
CDE08G1154 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 4.1e-76 289.3 283 54.1
RhsimUnG0138100 Rhododendron simsii HOM05D003781 ORTHO05D004299 5.0e-74 282.3 268 55.2
ATR0772G111 Amborella trichopoda HOM05D003781 ORTHO05D004299 1.2e-72 277.7 390 41.5
Nitab4.5_0002858g0040 Nicotiana tabacum HOM05D003781 ORTHO05D004299 2.7e-72 276.6 312 51.9
Os04g0498900 Oryza sativa ssp. japonica HOM05D003781 ORTHO05D004299 6.7e-71 271.9 314 51.0
PSO675G6385 Papaver somniferum HOM05D003781 ORTHO05D004299 2.2e-69 266.9 298 51.3
Lj1A1051T45 Lonicera japonica HOM05D003781 ORTHO05D004299 5.3e-68 262.3 255 52.9
BcaC01g01091 Brassica carinata HOM05D003781 ORTHO05D004299 9.1e-68 261.5 315 47.9
HPP92_023079 Vanilla planifolia HOM05D003781 ORTHO05D004299 5.5e-65 252.3 370 40.8
vmacro10320 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 2.1e-64 250.4 231 53.7
Nitab4.5_0008187g0010 Nicotiana tabacum HOM05D003781 ORTHO05D004299 2.7e-64 250.0 350 42.3
CSS0029856 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 6.7e-63 245.4 315 46.3
Zm00001eb078390 Zea mays HOM05D003781 ORTHO05D004299 6.7e-63 245.4 316 44.6
Zm00001eb078410 Zea mays HOM05D003781 ORTHO05D004299 6.7e-63 245.4 316 44.6
Zm00001eb078400 Zea mays HOM05D003781 ORTHO05D004299 4.4e-62 242.7 316 44.3
BcaNung01523 Brassica carinata HOM05D003781 ORTHO05D004299 1.6e-59 234.2 314 44.6
THA.LOC104816619 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 8.5e-58 228.4 214 57.5
SEGI_09697 Sequoiadendron giganteum HOM05D003781 ORTHO05D004299 6.1e-56 222.2 432 35.4
Pp3c11_11100 Physcomitrium patens HOM05D003781 ORTHO05D004299 4.0e-55 219.5 308 43.8
AUR62040627 Chenopodium quinoa HOM05D003781 ORTHO05D004299 9.8e-54 214.9 245 49.8
Cc02_g09440 Coffea canephora HOM05D003781 ORTHO05D004299 1.1e-52 211.5 263 47.9
ATR1127G225 Amborella trichopoda HOM05D003781 ORTHO05D004299 1.5e-49 201.1 319 40.8
SMO367G1200 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 4.7e-48 196.1 329 38.6
RhsimUnG0138400 Rhododendron simsii HOM05D003781 ORTHO05D004299 6.3e-45 185.7 182 56.6
Sc07g0006420 Simmondsia chinensis HOM05D003781 ORTHO05D004299 2.1e-40 170.6 218 47.7
SMO343G0088 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 2.0e-38 164.1 253 38.7
HanXRQChr03g0072391 Helianthus annuus HOM05D003781 ORTHO05D004299 7.5e-38 162.2 188 46.8
AagrBONN_evm.TU.Sc2ySwM_228.4048 Anthoceros agrestis HOM05D003781 ORTHO05D004299 6.4e-37 159.1 453 28.3
HanXRQChr15g0472861 Helianthus annuus HOM05D003781 ORTHO05D004299 2.7e-35 153.7 159 49.7
Actinidia06046 Actinidia chinensis HOM05D003781 ORTHO05D004299 5.0e-34 149.4 158 59.5
PRCOL_00001992 Prasinoderma coloniale HOM05D003781 ORTHO05D004299 7.3e-33 145.6 284 31.3
TPR.G33838 Trifolium pratense HOM05D003781 ORTHO05D004299 2.6e-30 137.1 165 49.1
SGA_v2.0_scaffold31G12848 Striga asiatica HOM05D003781 ORTHO05D004299 1.7e-29 134.4 207 43.0
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 3.7e-29 133.3 198 42.4
ATR0772G001 Amborella trichopoda HOM05D003781 ORTHO05D004299 6.4e-29 132.5 159 44.0
Mapoly0033s0057 Marchantia polymorpha HOM05D003781 ORTHO05D004299 8.3e-29 132.1 169 45.0
AL1G32760 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 7.0e-28 129.0 150 48.0
EL10Ac6g14086 Beta vulgaris HOM05D003781 ORTHO05D004299 1.6e-24 117.9 77 62.3
MD10G1054000 Malus domestica HOM05D003781 ORTHO05D004299 3.1e-23 113.6 154 44.8
Lsat_1_v5_gn_1_27721 Lactuca sativa HOM05D003781 ORTHO05D004299 6.8e-23 112.5 112 48.2
MCO12G060 Micromonas commoda HOM05D003781 ORTHO05D004299 9.2e-20 102.1 292 28.1
Gohir.D04G105401 Gossypium hirsutum HOM05D003781 ORTHO05D004299 5.1e-18 96.3 93 51.6
CBR_g53498 Chara braunii HOM05D003781 ORTHO05D004299 6.6e-18 95.9 79 57.0
Gorai.005G179000 Gossypium raimondii HOM05D003781 ORTHO05D004299 2.5e-17 94.0 85 54.1
CBR_g51231 Chara braunii HOM05D003781 ORTHO05D004299 7.3e-17 92.4 105 42.9
TAR629G3109 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.2e-16 91.7 103 46.6
SGA_v2.0_scaffold522G52710 Striga asiatica HOM05D003781 ORTHO05D004299 1.1e-15 88.6 107 43.0
Cre12.g542400 Chlamydomonas reinhardtii HOM05D003781 ORTHO05D004299 1.5e-14 84.7 149 32.9
TPR.G742 Trifolium pratense HOM05D003781 ORTHO05D004299 3.4e-14 83.6 87 54.0
CBR_g53714 Chara braunii HOM05D003781 ORTHO05D004299 2.2e-13 80.9 198 27.3
Nitab4.5_0001552g0060 Nicotiana tabacum HOM05D003781 ORTHO05D004299 4.6e-11 73.2 123 39.8
Cfa017313 Carpinus fangiana HOM05D003781 ORTHO05D004299 2.3e-10 70.9 43 74.4
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 7.3e-09 65.9 58 58.6
TPR.G38290 Trifolium pratense HOM05D010769 ORTHO05D011972 2.8e-08 63.9 55 52.7
TPR.G165 Trifolium pratense HOM05D003781 ORTHO05D004299 1.1e-07 62.0 56 50.0
TAR375G0299 Trochodendron aralioides HOM05D067126 ORTHO05D415426 1.1e-07 62.0 43 67.4


User provided reference genes

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