Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1366 Acer truncatum HOM05D000017 ORTHO05D037899 5.2e-98 360.9 167 100.0
Atru.chr9.5 Acer truncatum HOM05D000017 ORTHO05D000013 3.4e-25 119.0 124 47.6
Atru.chr13.2288 Acer truncatum HOM05D000017 ORTHO05D000013 1.0e-21 107.5 150 36.7
Atru.chr2.3812 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-19 100.1 147 37.4
Atru.chr12.1868 Acer truncatum HOM05D000017 ORTHO05D000013 2.0e-17 93.2 61 65.6
Atru.chr12.1867 Acer truncatum HOM05D000017 ORTHO05D037899 1.1e-15 87.4 56 76.8
Atru.chr12.1107 Acer truncatum HOM05D000017 ORTHO05D000013 3.3e-12 75.9 165 28.5
Atru.chr5.2680 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-11 73.9 143 28.0
Actinidia29263 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.7e-11 73.6 151 30.5
Atru.chr3.730 Acer truncatum HOM05D000017 ORTHO05D000013 6.3e-11 71.6 133 28.6
Atru.chr10.1873 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-10 70.9 149 27.5
Atru.chr3.2457 Acer truncatum HOM05D000017 ORTHO05D000013 3.1e-10 69.3 147 27.9
Atru.chr13.2307 Acer truncatum HOM05D000017 ORTHO05D000013 9.1e-10 67.8 150 29.3
Hma1.2p1_0085F.1_g044120 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.1e-10 67.8 141 31.2
Hma1.2p1_0085F.1_g044131 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.1e-10 67.8 141 31.2
QL09p029670 Quercus lobata HOM05D000017 ORTHO05D000013 9.1e-10 67.8 132 31.1
Atru.chr11.1920 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-09 67.4 147 27.2
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-09 67.0 150 30.7
QL09p032027 Quercus lobata HOM05D000017 ORTHO05D000013 1.6e-09 67.0 131 31.3
Atru.chr13.2473 Acer truncatum HOM05D000017 ORTHO05D000013 2.0e-09 66.6 147 29.9
COL.COLO4_38240 Corchorus olitorius HOM05D008085 ORTHO05D010173 2.0e-09 66.6 132 33.3
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.7e-09 66.2 151 27.8
Atru.chr12.1286 Acer truncatum HOM05D000017 ORTHO05D000013 5.9e-09 65.1 120 30.0
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.9e-09 65.1 168 28.0
Dinv03203 Davidia involucrata HOM05D007604 ORTHO05D008966 7.7e-09 64.7 152 27.6
ECA247G2348 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.0e-08 64.3 171 28.1
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-08 64.3 128 32.8
Rhsim08G0098700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-08 64.3 152 28.9
Atru.chr1.2885 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-08 63.5 158 26.6
Hma1.2p1_0157F.1_g068990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-08 63.5 128 32.8
Rhsim02G0065400 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-08 63.5 140 29.3
Rhsim02G0065700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-08 63.5 140 29.3
Rhsim06G0119600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-08 63.5 151 30.5
Rhsim11G0079200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-08 63.5 140 29.3
ECA238G2914 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.2e-08 63.2 187 27.8
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.2e-08 63.2 167 31.1
Atru.chr6.1096 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-08 62.8 151 26.5
Ah.15g097380 Amaranthus hybridus HOM05D000017 ORTHO05D000013 2.9e-08 62.8 149 29.5
ECA246G2359 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.9e-08 62.8 160 29.4
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.9e-08 62.8 156 31.4
Hma1.2p1_0026F.1_g016405 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.5e-08 61.2 134 32.1
Hma1.2p1_0292F.1_g115670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.5e-08 61.2 134 32.1
Hma1.2p1_1314F.1_g275035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.5e-08 61.2 134 32.1
ECA233G4979 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-07 60.8 160 30.6
ECA236G3721 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-07 60.8 161 30.4
ECA248G0041 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-07 60.8 159 30.8
Hma1.2p1_0542F.1_g174870 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-07 60.8 160 28.8
THA.LOC104806013 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-07 60.8 166 28.3
Ca_13798_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.5e-07 60.5 127 29.9
Hma1.2p1_0936F.1_g238946 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-07 60.5 160 28.8
Hma1.2p1_0936F.1_g238949 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-07 60.5 160 28.8
TWI15G0388 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-07 60.5 142 30.3
VMungo1309G0288 Vigna mungo HOM05D000017 ORTHO05D000013 1.5e-07 60.5 143 28.7
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 1.9e-07 60.1 155 29.0
Hma1.2p1_1233F.1_g268990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-07 59.7 133 30.8
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-07 59.7 155 29.0
Sopen03g028620 Solanum pennellii HOM05D001851 ORTHO05D013101 2.5e-07 59.7 155 29.0
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 3.2e-07 59.3 151 27.2
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.2e-07 59.3 140 29.3
PGR005G0003 Punica granatum HOM05D000017 ORTHO05D000013 3.2e-07 59.3 113 30.1
Atru.chr8.1311 Acer truncatum HOM05D000017 ORTHO05D000013 4.2e-07 58.9 110 30.0
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 4.2e-07 58.9 159 27.0
Hma1.2p1_0046F.1_g027230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.4e-07 57.8 142 29.6
Atru.chr2.1485 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-06 57.4 153 24.8
C07p39600 Brassica napus HOM05D000017 ORTHO05D000013 1.2e-06 57.4 153 26.8
ECA233G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-06 57.4 142 26.8
Hma1.2p1_0257F.1_g103550 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-06 57.0 160 30.6
Hma1.2p1_2048F.1_g312460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-06 57.0 134 29.1
Atru.chr10.215 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-06 56.6 125 26.4
Atru.chr5.879 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-06 56.6 147 29.3
ECA246G2150 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.1e-06 56.6 174 27.0
Hma1.2p1_1076F.1_g254590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-06 56.6 144 27.1
Hma1.2p1_2904F.1_g330080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-06 56.6 164 26.8
Atru.chr11.1154 Acer truncatum HOM05D000017 ORTHO05D000013 2.7e-06 56.2 172 23.8
ECA246G4247 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.7e-06 55.5 161 26.1
AL3G18110 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 6.1e-06 55.1 150 28.0
PSO384G0696 Papaver somniferum HOM05D000017 ORTHO05D000013 6.1e-06 55.1 134 29.9
PSO384G5111 Papaver somniferum HOM05D000017 ORTHO05D000013 6.1e-06 55.1 137 27.0
EL10Ac7g17726 Beta vulgaris HOM05D000017 ORTHO05D000013 8.0e-06 54.7 168 26.2
Hma1.2p1_0624F.1_g191260 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.0e-06 54.7 145 29.0


User provided reference genes

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