Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 2.4e-102 375.6 192 100.0
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 7.2e-35 151.4 179 51.4
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 4.7e-34 148.7 165 52.1
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 6.1e-34 148.3 167 53.3
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.8e-33 146.7 157 54.8
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 3.1e-30 136.0 164 45.1
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 7.0e-30 134.8 173 45.1
Atru.chr4.1791 Acer truncatum HOM05D007592 ORTHO05D004645 1.5e-27 127.1 109 63.3
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.5e-27 127.1 167 49.7
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 5.5e-27 125.2 165 47.3
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 8.8e-25 117.9 167 45.5
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 1.5e-24 117.1 170 41.8
Atru.chr3.1033 Acer truncatum HOM05D007592 ORTHO05D004645 2.0e-24 116.7 136 46.3
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 2.0e-24 116.7 170 42.9
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 2.6e-24 116.3 168 45.2
Atru.chr13.1766 Acer truncatum HOM05D007592 ORTHO05D004645 5.7e-24 115.2 117 51.3
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 5.7e-24 115.2 164 40.9
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 9.8e-24 114.4 173 41.6
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 3.7e-23 112.5 178 37.6
C04p29390 Brassica napus HOM05D007592 ORTHO05D004645 2.4e-22 109.8 126 48.4
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 2.4e-22 109.8 173 39.9
BolC6t37310H Brassica oleracea HOM05D007592 ORTHO05D004645 4.1e-22 109.0 174 39.7
Atru.chr12.1217 Acer truncatum HOM05D007592 ORTHO05D004645 7.0e-22 108.2 137 45.3
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 4.5e-21 105.5 175 41.1
Atru.chr6.1370 Acer truncatum HOM05D007592 ORTHO05D004645 5.9e-21 105.1 137 46.0
CANSAT35G0055 Cannabis sativa HOM05D007592 ORTHO05D004645 7.7e-21 104.8 143 44.1
Ciclev10023655m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.0e-20 104.4 138 44.9
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 5.0e-20 102.1 177 36.2
Atru.chr3.1639 Acer truncatum HOM05D007592 ORTHO05D004645 6.6e-20 101.7 147 42.9
Atru.chr11.101 Acer truncatum HOM05D007592 ORTHO05D004645 1.1e-19 100.9 161 41.0
Atru.chr8.1611 Acer truncatum HOM05D007592 ORTHO05D004645 2.5e-19 99.8 161 42.2
Atru.chr10.191 Acer truncatum HOM05D007592 ORTHO05D004645 7.2e-19 98.2 100 53.0
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 1.2e-18 97.4 164 40.2
AL8G44460 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 4.7e-18 95.5 150 39.3
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.1e-18 95.1 166 38.6
Ciclev10003950m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.0e-17 94.4 57 71.9
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 1.4e-17 94.0 163 38.7
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-17 93.6 166 38.0
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-17 93.6 166 38.0
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-17 93.6 166 38.0
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-17 93.6 166 38.0
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-17 93.6 166 38.0
AL9U10800 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.3e-17 93.2 103 47.6
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 3.0e-17 92.8 77 57.1
Manes.03G086209 Manihot esculenta HOM05D007592 ORTHO05D004645 4.0e-17 92.4 69 60.9
AL1G54420 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 6.8e-17 91.7 100 47.0
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.8e-17 91.7 166 37.3
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 1.2e-16 90.9 74 55.4
Atru.chr11.1181 Acer truncatum HOM05D000214 ORTHO05D000131 2.6e-16 89.7 71 57.7
Ciclev10003711m.g Citrus clementina HOM05D007592 ORTHO05D004645 2.6e-16 89.7 115 50.4
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 3.4e-16 89.4 189 33.9
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 5.7e-16 88.6 65 61.5
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.7e-15 87.0 184 32.1
AL2G23940 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.8e-15 86.3 140 42.1
CANSAT64G0010 Cannabis sativa HOM05D007592 ORTHO05D004645 3.7e-15 85.9 103 45.6
Migut.A00242 Erythranthe guttata HOM05D007592 ORTHO05D004645 3.7e-15 85.9 195 30.3
Atru.chr6.863 Acer truncatum HOM05D007592 ORTHO05D004645 2.4e-14 83.2 161 37.9
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 2.4e-14 83.2 184 32.6
Manes.07G048750 Manihot esculenta HOM05D007592 ORTHO05D004645 2.4e-14 83.2 125 40.8
FAN18G2940 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.4e-14 82.0 152 37.5
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 9.2e-14 81.3 171 32.7
Carub.0004s0678 Capsella rubella HOM05D007592 ORTHO05D004645 1.2e-13 80.9 188 30.3
CANSAT25G1186 Cannabis sativa HOM05D007592 ORTHO05D004645 1.6e-13 80.5 103 44.7
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 2.7e-13 79.7 169 33.7
Manes.01G069750 Manihot esculenta HOM05D007592 ORTHO05D004645 4.5e-13 79.0 125 39.2
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 5.0e-12 75.5 150 35.3
CARHR180790 Cardamine hirsuta HOM05D007592 ORTHO05D004645 5.0e-12 75.5 101 41.6
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 6.6e-12 75.1 171 31.6
Oeu019651.1 Olea europaea HOM05D007592 ORTHO05D004645 1.5e-11 73.9 63 50.8
AL5G14150 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.5e-11 73.2 54 57.4
Manes.13G094101 Manihot esculenta HOM05D007592 ORTHO05D004645 3.3e-11 72.8 158 34.8
BcaB06g28792 Brassica carinata HOM05D007743 ORTHO05D004645 7.3e-11 71.6 106 38.7
CARHR184030 Cardamine hirsuta HOM05D007592 ORTHO05D004645 9.5e-11 71.2 100 40.0
BcaB07g33427 Brassica carinata HOM05D007743 ORTHO05D004645 1.2e-10 70.9 104 37.5
Manes.03G096216 Manihot esculenta HOM05D007592 ORTHO05D004645 1.6e-10 70.5 145 33.1
Oeu023351.1 Olea europaea HOM05D007592 ORTHO05D004645 1.6e-10 70.5 128 39.1
BcaB01g01748 Brassica carinata HOM05D007743 ORTHO05D004645 2.8e-10 69.7 94 38.3
BcaB04g19609 Brassica carinata HOM05D007743 ORTHO05D004645 2.8e-10 69.7 106 38.7
AT2G13760 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 3.6e-10 69.3 129 38.8
PGSC0003DMG400046067 Solanum tuberosum HOM05D007592 ORTHO05D004645 4.7e-10 68.9 99 40.4
Rhsim01G0124200 Rhododendron simsii HOM05D000422 ORTHO05D004645 6.1e-10 68.6 168 33.9
CSS0033894 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.0e-10 68.2 165 30.9
CSS0041981 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.0e-10 68.2 165 30.9
AL1G39540 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.4e-09 67.4 54 50.0
BcaC08g43897 Brassica carinata HOM05D007743 ORTHO05D004645 1.4e-09 67.4 93 39.8
BraA06t26442Z Brassica rapa HOM05D007592 ORTHO05D004645 1.4e-09 67.4 58 53.4
AT1G66235 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 2.3e-09 66.6 107 38.3
Oeu053537.1 Olea europaea HOM05D007592 ORTHO05D004645 2.3e-09 66.6 122 37.7
CANSAT11G1366 Cannabis sativa HOM05D007592 ORTHO05D004645 3.1e-09 66.2 103 40.8
BcaC01g02275 Brassica carinata HOM05D007743 ORTHO05D004645 8.9e-09 64.7 118 33.1
FAN09G4280 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.5e-08 63.9 142 33.8
BcaB08g34421 Brassica carinata HOM05D007743 ORTHO05D004645 2.0e-08 63.5 96 35.4
CARHR103730 Cardamine hirsuta HOM05D007592 ORTHO05D004645 2.0e-08 63.5 143 31.5
CSS0010386 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.8e-08 62.0 159 30.2
CSS0034959 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.5e-08 61.6 127 36.2
Thhalv10019741m.g Eutrema salsugineum HOM05D007592 ORTHO05D004645 7.5e-08 61.6 148 31.1
Atru.chr2.3826 Acer truncatum HOM05D007592 ORTHO05D004645 9.8e-08 61.2 84 46.4
CSS0010296 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.8e-08 61.2 213 26.8
CSS0012194 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.8e-08 61.2 213 26.8
PGSC0003DMG400037078 Solanum tuberosum HOM05D008583 ORTHO05D004645 9.8e-08 61.2 117 35.0
BcaB02g10737 Brassica carinata HOM05D007743 ORTHO05D004645 1.3e-07 60.8 69 39.1
CSS0002566 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-07 60.8 213 26.3
CSS0006860 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.7e-07 60.5 213 26.8
SalBow3G0485 Salvia bowleyana HOM05D020195 ORTHO05D023117 1.7e-07 60.5 101 44.6
CSS0008814 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-07 59.7 180 28.9
CSS0008946 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-07 59.7 180 28.9
CSS0011061 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-07 59.7 180 28.9
CSS0023642 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-07 59.7 180 28.9
CSS0041053 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-07 59.7 180 28.9
CSS0001664 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.7e-07 59.3 52 51.9
CSS0049636 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.9e-07 58.9 52 51.9
Oeu052134.1 Olea europaea HOM05D001085 ORTHO05D000895 4.9e-07 58.9 118 36.4
CSS0004599 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.4e-07 58.5 126 34.1
FAN09G0506 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.1e-06 57.8 198 25.8
QL02p046053 Quercus lobata HOM05D001576 ORTHO05D000131 1.4e-06 57.4 163 35.6
CSS0029425 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 3.2e-06 56.2 123 34.1
Hund24086 Selenicereus undatus HOM05D000214 ORTHO05D011049 7.0e-06 55.1 125 32.8
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-06 54.7 160 29.4
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-06 54.7 160 29.4
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-06 54.7 160 29.4
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-06 54.7 160 29.4
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-06 54.7 160 29.4
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-06 54.7 160 29.4
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-06 54.7 160 29.4
Dinv07939 Davidia involucrata HOM05D001576 ORTHO05D000401 9.2e-06 54.7 149 29.5


User provided reference genes

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