Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1303 Acer truncatum HOM05D001890 ORTHO05D003442 6.4e-73 277.3 140 100.0
Cfa020085 Carpinus fangiana HOM05D001890 ORTHO05D003442 1.3e-54 216.5 139 74.1
Ciclev10011250m.g Citrus clementina HOM05D001890 ORTHO05D003442 5.1e-54 214.5 139 76.3
QL07p026881 Quercus lobata HOM05D001890 ORTHO05D003442 3.3e-53 211.8 139 72.7
COL.COLO4_29518 Corchorus olitorius HOM05D001890 ORTHO05D003442 8.1e-52 207.2 139 72.7
Duzib093G1618 Durio zibethinus HOM05D001890 ORTHO05D003442 1.1e-51 206.8 139 71.2
Duzib128G1367 Durio zibethinus HOM05D001890 ORTHO05D003442 5.2e-51 204.5 139 70.5
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 6.8e-51 204.1 139 70.5
Thecc.05G108400 Theobroma cacao HOM05D001890 ORTHO05D003442 6.8e-51 204.1 139 71.2
Potri.006G201000 Populus trichocarpa HOM05D001890 ORTHO05D003442 8.9e-51 203.8 139 70.5
Dinv11882 Davidia involucrata HOM05D001890 ORTHO05D003442 3.4e-50 201.8 139 69.8
Potri.016G067000 Populus trichocarpa HOM05D001890 ORTHO05D003442 9.9e-50 200.3 139 69.1
CiPaw.10G019600 Carya illinoinensis HOM05D001890 ORTHO05D003442 1.7e-49 199.5 139 68.3
CiPaw.09G022800 Carya illinoinensis HOM05D001890 ORTHO05D003442 2.9e-49 198.7 139 69.1
Gohir.D09G129000 Gossypium hirsutum HOM05D001890 ORTHO05D003442 8.4e-49 197.2 139 69.1
Gorai.006G147700 Gossypium raimondii HOM05D001890 ORTHO05D003442 8.4e-49 197.2 139 69.1
TWI77G0744 Tripterygium wilfordii HOM05D001890 ORTHO05D003442 8.4e-49 197.2 139 67.6
Gohir.A09G132700 Gossypium hirsutum HOM05D001890 ORTHO05D003442 1.4e-48 196.4 139 69.1
TAR369G0675 Trochodendron aralioides HOM05D001890 ORTHO05D003442 3.2e-48 195.3 139 65.5
FvH4_6g20770 Fragaria vesca HOM05D001890 ORTHO05D003442 1.6e-47 193.0 140 69.3
FAN14G1848 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.6e-47 193.0 140 69.3
Lalb_Chr01g0017781 Lupinus albus HOM05D001890 ORTHO05D003442 1.6e-47 193.0 139 67.6
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 3.5e-47 191.8 140 69.3
Lalb_Chr20g0111261 Lupinus albus HOM05D001890 ORTHO05D003442 1.0e-46 190.3 139 66.2
Gohir.D01G122600 Gossypium hirsutum HOM05D001890 ORTHO05D003442 1.3e-46 189.9 139 66.2
Gorai.002G153500 Gossypium raimondii HOM05D001890 ORTHO05D003442 1.3e-46 189.9 139 66.2
MD14G1042900 Malus domestica HOM05D001890 ORTHO05D003442 1.3e-46 189.9 140 70.0
RcHm_v2.0_Chr3g0476671 Rosa chinensis HOM05D001890 ORTHO05D003442 1.3e-46 189.9 140 68.6
arahy.Tifrunner.gnm1.ann1.3V0CBS Arachis hypogaea HOM05D001890 ORTHO05D003442 2.3e-46 189.1 139 66.9
CANSAT54G2662 Cannabis sativa HOM05D001890 ORTHO05D003442 2.3e-46 189.1 140 67.1
CANSAT64G0653 Cannabis sativa HOM05D001890 ORTHO05D003442 2.3e-46 189.1 140 67.1
Ca_11670_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 5.1e-46 188.0 139 68.3
Manes.08G036000 Manihot esculenta HOM05D001890 ORTHO05D003442 6.6e-46 187.6 139 65.5
VMungo0720G1360 Vigna mungo HOM05D001890 ORTHO05D003442 8.6e-46 187.2 139 66.2
Actinidia06190 Actinidia chinensis HOM05D001890 ORTHO05D003442 1.5e-45 186.4 139 64.7
Nitab4.5_0005218g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 1.5e-45 186.4 139 65.5
Cpa.g.sc104.3 Carica papaya HOM05D001890 ORTHO05D003442 1.9e-45 186.0 139 68.3
Glyma.02G193200 Glycine max HOM05D001890 ORTHO05D003442 1.9e-45 186.0 139 66.9
vmacro09092 Vaccinium macrocarpon HOM05D001890 ORTHO05D003442 2.5e-45 185.7 139 64.0
GSVIVG01022534001 Vitis vinifera HOM05D001890 ORTHO05D003442 2.5e-45 185.7 139 61.9
MD12G1043900 Malus domestica HOM05D001890 ORTHO05D003442 4.3e-45 184.9 140 67.1
Nitab4.5_0009788g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 5.6e-45 184.5 139 64.7
Oeu020167.1 Olea europaea HOM05D001890 ORTHO05D003442 5.6e-45 184.5 140 67.1
CSS0016780 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D003442 7.3e-45 184.1 139 66.2
Prupe.7G091200 Prunus persica HOM05D001890 ORTHO05D003442 7.3e-45 184.1 140 65.0
Psat1g223360 Pisum sativum HOM05D001890 ORTHO05D003442 2.1e-44 182.6 139 64.7
Lj5g0000561 Lotus japonicus HOM05D001890 ORTHO05D003442 2.8e-44 182.2 139 66.9
Nitab4.5_0000721g0220 Nicotiana tabacum HOM05D001890 ORTHO05D003442 3.6e-44 181.8 139 62.6
ClCG10G018130 Citrullus lanatus HOM05D001890 ORTHO05D003442 6.2e-44 181.0 140 61.4
Lj1g0026398 Lotus japonicus HOM05D001890 ORTHO05D003442 6.2e-44 181.0 139 64.7
Phvul.007G266400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 6.2e-44 181.0 139 64.7
arahy.Tifrunner.gnm1.ann1.AQHB6D Arachis hypogaea HOM05D001890 ORTHO05D003442 8.1e-44 180.6 139 66.2
Nitab4.5_0001918g0040 Nicotiana tabacum HOM05D001890 ORTHO05D003442 8.1e-44 180.6 139 64.0
Hma1.2p1_2851F.1_g329440 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 1.1e-43 180.3 139 59.7
Medtr1g055315 Medicago truncatula HOM05D001890 ORTHO05D003442 1.1e-43 180.3 139 65.5
Glyma.10G083700 Glycine max HOM05D001890 ORTHO05D003442 2.4e-43 179.1 139 65.5
Hma1.2p1_0969F.1_g242598 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 2.4e-43 179.1 139 60.4
Aqoxy1G00604 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 4.0e-43 178.3 139 60.4
CsaV3_3G038170 Cucumis sativus L. HOM05D001890 ORTHO05D003442 4.0e-43 178.3 140 60.7
Sed0008069 Sechium edule HOM05D001890 ORTHO05D003442 4.0e-43 178.3 140 60.0
TAR623G0995 Trochodendron aralioides HOM05D001890 ORTHO05D003442 5.2e-43 177.9 139 61.2
arahy.Tifrunner.gnm1.ann1.M3JRXW Arachis hypogaea HOM05D001890 ORTHO05D003442 6.9e-43 177.6 139 64.7
PGR004G2025 Punica granatum HOM05D001890 ORTHO05D003442 6.9e-43 177.6 139 62.6
MBI11_g01309_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D003442 8.9e-43 177.2 139 63.3
Migut.L01851 Erythranthe guttata HOM05D001890 ORTHO05D003442 1.2e-42 176.8 140 66.4
Eucgr.A02559 Eucalyptus grandis HOM05D001890 ORTHO05D003442 1.2e-42 176.8 145 62.8
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 2.0e-42 176.0 139 63.3
Sed0025654 Sechium edule HOM05D001890 ORTHO05D003442 2.6e-42 175.6 140 61.4
Solyc01g006870.4 Solanum lycopersicum HOM05D001890 ORTHO05D003442 2.6e-42 175.6 139 61.2
HanXRQChr13g0398661 Helianthus annuus HOM05D001890 ORTHO05D003442 4.4e-42 174.9 139 59.0
Sopen01g002860 Solanum pennellii HOM05D001890 ORTHO05D003442 7.6e-42 174.1 139 60.4
Cc01_g02980 Coffea canephora HOM05D001890 ORTHO05D003442 2.2e-41 172.6 139 62.6
DCAR_013449 Daucus carota HOM05D001890 ORTHO05D003442 2.2e-41 172.6 139 60.4
Phvul.001G197400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 3.8e-41 171.8 139 63.3
Glyma.03G203900 Glycine max HOM05D001890 ORTHO05D003442 6.4e-41 171.0 139 64.0
Glyma.19G201300 Glycine max HOM05D001890 ORTHO05D003442 6.4e-41 171.0 139 64.0
Migut.J00744 Erythranthe guttata HOM05D001890 ORTHO05D003442 8.4e-41 170.6 139 59.7
CAN.G674.15 Capsicum annuum HOM05D001890 ORTHO05D003442 1.9e-40 169.5 139 59.7
PGSC0003DMG400028231 Solanum tuberosum HOM05D001890 ORTHO05D003442 1.9e-40 169.5 139 61.2
Aa31LG3G5200 Aethionema arabicum HOM05D001890 ORTHO05D003442 2.4e-40 169.1 139 59.0
Cc01_g03030 Coffea canephora HOM05D001890 ORTHO05D003442 5.4e-40 167.9 133 63.2
FAN09G2041 Fragaria x ananassa HOM05D001890 ORTHO05D003442 9.3e-40 167.2 125 69.6
Peaxi162Scf00203g00101 Petunia axillaris HOM05D001890 ORTHO05D003442 1.6e-39 166.4 133 60.9
SGA_v2.0_scaffold392G50676 Striga asiatica HOM05D001890 ORTHO05D003442 1.6e-39 166.4 133 61.7
Cc06_g06840 Coffea canephora HOM05D001890 ORTHO05D003442 2.1e-39 166.0 139 61.2
SalBow5G5266 Salvia bowleyana HOM05D001890 ORTHO05D003442 2.1e-39 166.0 140 60.7
THA.LOC104816629 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 2.1e-39 166.0 139 59.7
Nn2g14393 Nelumbo nucifera HOM05D001890 ORTHO05D003442 3.5e-39 165.2 139 56.8
CARHR206750 Cardamine hirsuta HOM05D001890 ORTHO05D003442 6.0e-39 164.5 143 58.7
Sc07g0006350 Simmondsia chinensis HOM05D001890 ORTHO05D003442 6.0e-39 164.5 140 60.7
Medtr7g106640 Medicago truncatula HOM05D001890 ORTHO05D003442 7.8e-39 164.1 141 61.0
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 7.8e-39 164.1 140 62.1
CDE04G0663 Ceratophyllum demersum HOM05D001890 ORTHO05D003442 1.7e-38 162.9 139 57.6
Solyc10g081770.3 Solanum lycopersicum HOM05D001890 ORTHO05D003442 3.0e-38 162.2 139 57.6
Sopen10g032280 Solanum pennellii HOM05D001890 ORTHO05D003442 3.9e-38 161.8 139 57.6
EL10Ac5g11825 Beta vulgaris HOM05D001890 ORTHO05D003442 6.6e-38 161.0 140 57.9
Psat3g028200 Pisum sativum HOM05D001890 ORTHO05D003442 1.1e-37 160.2 141 59.6
AUR62036337 Chenopodium quinoa HOM05D001890 ORTHO05D003442 1.5e-37 159.8 140 58.6
Ca_09069_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 1.5e-37 159.8 141 61.7
arahy.Tifrunner.gnm1.ann1.JU9MFG Arachis hypogaea HOM05D001890 ORTHO05D003442 1.9e-37 159.5 124 65.3
A03p02730 Brassica napus HOM05D001890 ORTHO05D003442 2.5e-37 159.1 139 56.8
AUR62030696 Chenopodium quinoa HOM05D001890 ORTHO05D003442 2.5e-37 159.1 140 58.6
Sabra16G0068300 Salix brachista HOM05D001890 ORTHO05D003442 2.5e-37 159.1 125 65.6
TPR.G25807 Trifolium pratense HOM05D001890 ORTHO05D003442 2.5e-37 159.1 141 56.7
Hund10836 Selenicereus undatus HOM05D001890 ORTHO05D003442 4.3e-37 158.3 135 56.3
BraA03t12885Z Brassica rapa HOM05D001890 ORTHO05D003442 5.6e-37 157.9 140 57.1
ECA233G4742 Erigeron canadensis HOM05D001890 ORTHO05D003442 7.3e-37 157.5 139 56.1
Peaxi162Scf00675g00056 Petunia axillaris HOM05D001890 ORTHO05D003442 7.3e-37 157.5 125 64.8
BraA05t22558Z Brassica rapa HOM05D001890 ORTHO05D003442 9.6e-37 157.1 140 56.4
PSO339G5959 Papaver somniferum HOM05D001890 ORTHO05D003442 9.6e-37 157.1 139 53.2
Sp3g09950 Schrenkiella parvula HOM05D001890 ORTHO05D003442 9.6e-37 157.1 140 57.1
Rhsim02G0181100 Rhododendron simsii HOM05D001890 ORTHO05D003442 1.3e-36 156.8 126 61.1
A03p37250 Brassica napus HOM05D001890 ORTHO05D003442 1.6e-36 156.4 140 56.4
C03p45110 Brassica napus HOM05D001890 ORTHO05D003442 1.6e-36 156.4 140 55.7
BolC3t16775H Brassica oleracea HOM05D001890 ORTHO05D003442 1.6e-36 156.4 140 55.7
BcaB04g18657 Brassica carinata HOM05D001890 ORTHO05D003442 2.1e-36 156.0 141 55.3
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 2.8e-36 155.6 139 54.0
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 4.8e-36 154.8 139 54.0
A05p37600 Brassica napus HOM05D001890 ORTHO05D003442 4.8e-36 154.8 140 55.7
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 4.8e-36 154.8 139 54.0
Sabra06G0154700 Salix brachista HOM05D001890 ORTHO05D003442 4.8e-36 154.8 141 58.9
Sp6g36420 Schrenkiella parvula HOM05D001890 ORTHO05D003442 4.8e-36 154.8 141 53.2
BraA03t09636Z Brassica rapa HOM05D001890 ORTHO05D003442 6.2e-36 154.5 139 55.4
Thhalv10013326m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 6.2e-36 154.5 139 53.2
Thhalv10020420m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 6.2e-36 154.5 141 54.6
BcaC01g04089 Brassica carinata HOM05D001890 ORTHO05D003442 8.1e-36 154.1 140 56.4
HanXRQChr02g0053331 Helianthus annuus HOM05D001890 ORTHO05D003442 8.1e-36 154.1 138 52.9
THA.LOC104826799 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 8.1e-36 154.1 142 57.7
PSO384G4950 Papaver somniferum HOM05D001890 ORTHO05D003442 1.8e-35 152.9 139 51.8
AL6G16530 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 2.4e-35 152.5 139 55.4
Lsat_1_v5_gn_6_34701 Lactuca sativa HOM05D001890 ORTHO05D003442 2.4e-35 152.5 139 54.7
HPP92_005860 Vanilla planifolia HOM05D001890 ORTHO05D003442 3.1e-35 152.1 139 52.5
BcaB06g25587 Brassica carinata HOM05D001890 ORTHO05D003442 4.0e-35 151.8 141 54.6
ATR0697G280 Amborella trichopoda HOM05D001890 ORTHO05D003442 6.9e-35 151.0 138 52.2
BcaC05g29335 Brassica carinata HOM05D001890 ORTHO05D003442 9.0e-35 150.6 139 54.7
C05p56160 Brassica napus HOM05D001890 ORTHO05D003442 9.0e-35 150.6 139 54.7
BolC5t34281H Brassica oleracea HOM05D001890 ORTHO05D003442 9.0e-35 150.6 139 54.7
CARHR086270 Cardamine hirsuta HOM05D001890 ORTHO05D003442 9.0e-35 150.6 141 51.8
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 1.5e-34 149.8 139 54.0
Os11g0568700 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D003442 1.5e-34 149.8 143 54.5
PSO063G3472 Papaver somniferum HOM05D001890 ORTHO05D003442 3.4e-34 148.7 139 51.1
BcaC06g32374 Brassica carinata HOM05D001890 ORTHO05D003442 4.5e-34 148.3 139 53.2
C09p70360 Brassica napus HOM05D001890 ORTHO05D003442 4.5e-34 148.3 139 53.2
AL3G23280 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 1.7e-33 146.4 140 50.0
BolC9t59781H Brassica oleracea HOM05D001890 ORTHO05D003442 2.9e-33 145.6 139 52.5
Nn6g34599 Nelumbo nucifera HOM05D001890 ORTHO05D003442 2.9e-33 145.6 139 51.1
BcaC06g32575 Brassica carinata HOM05D001890 ORTHO05D003442 1.1e-32 143.7 139 50.4
A10p29950 Brassica napus HOM05D001890 ORTHO05D003442 5.4e-32 141.4 139 49.6
BraA10t45034Z Brassica rapa HOM05D001890 ORTHO05D003442 5.4e-32 141.4 139 49.6
Carub.0003s1106 Capsella rubella HOM05D001890 ORTHO05D003442 5.4e-32 141.4 140 50.0
Carub.0006s0532 Capsella rubella HOM05D001890 ORTHO05D003442 9.3e-32 140.6 139 50.4
Haze_20107 Corylus avellana HOM05D001890 ORTHO05D003442 3.5e-31 138.7 101 69.3
Sed0014759 Sechium edule HOM05D001890 ORTHO05D003442 3.5e-31 138.7 141 52.5
SGA_v2.0_scaffold31G12814 Striga asiatica HOM05D001890 ORTHO05D003442 4.6e-31 138.3 124 54.8
Actinidia07949 Actinidia chinensis HOM05D001890 ORTHO05D003442 1.0e-30 137.1 103 62.1
MELO3C009560.2 Cucumis melo HOM05D001890 ORTHO05D003442 3.9e-30 135.2 112 61.6
PSO339G3824 Papaver somniferum HOM05D001890 ORTHO05D003442 2.5e-29 132.5 141 47.5
Aqoxy2G00642 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 1.6e-28 129.8 140 48.6
PSO384G4065 Papaver somniferum HOM05D001890 ORTHO05D003442 1.6e-28 129.8 141 45.4
CAN.G911.29 Capsicum annuum HOM05D001890 ORTHO05D003442 3.8e-25 118.6 139 46.8
unitig_746.g26781 Utricularia gibba HOM05D001890 ORTHO05D003442 2.4e-24 115.9 93 54.8
Aa31sc52G260 Aethionema arabicum HOM05D001890 ORTHO05D003442 3.2e-24 115.5 129 47.3
HanXRQChr05g0138051 Helianthus annuus HOM05D001890 ORTHO05D003442 6.0e-23 111.3 117 48.7
SEGI_19574 Sequoiadendron giganteum HOM05D001890 ORTHO05D003442 3.9e-22 108.6 95 55.8
PSO339G0680 Papaver somniferum HOM05D001890 ORTHO05D003442 2.5e-21 105.9 113 43.4
Lj1A1058T56 Lonicera japonica HOM05D001890 ORTHO05D003442 3.3e-21 105.5 77 63.6
Gohir.A01G135400 Gossypium hirsutum HOM05D001890 ORTHO05D003442 4.0e-19 98.6 50 80.0
PSO063G7439 Papaver somniferum HOM05D001890 ORTHO05D003442 7.6e-18 94.4 54 63.0
Manes.09G043100 Manihot esculenta HOM05D001890 ORTHO05D003442 1.3e-17 93.6 51 72.5
Mapoly0007s0117 Marchantia polymorpha HOM05D001890 ORTHO05D003442 1.1e-16 90.5 146 35.6
AT5G06440 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 7.1e-16 87.8 51 70.6
SMO356G0493 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 1.2e-15 87.0 139 36.0
arahy.Tifrunner.gnm1.ann1.AF4ETX Arachis hypogaea HOM05D001890 ORTHO05D003442 5.1e-14 81.6 71 63.4
Psat6g097960 Pisum sativum HOM05D001890 ORTHO05D003442 2.1e-12 76.3 40 67.5
Pp3c15_23860 Physcomitrium patens HOM05D001890 ORTHO05D003442 4.8e-12 75.1 60 48.3
PSO384G0895 Papaver somniferum HOM05D001890 ORTHO05D003442 1.8e-11 73.2 40 65.0
AT3G11720 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 4.5e-10 68.6 40 65.0
SHI28305 Sapria himalayana HOM05D001890 ORTHO05D003442 1.7e-09 66.6 36 75.0
TPR.G7023 Trifolium pratense HOM05D001890 ORTHO05D003442 8.5e-09 64.3 35 71.4
AagrBONN_evm.TU.Sc2ySwM_362.1054 Anthoceros agrestis HOM05D001890 ORTHO05D003442 1.6e-07 60.1 40 55.0
Pp3c9_24430 Physcomitrium patens HOM05D001890 ORTHO05D003442 2.7e-07 59.3 40 47.5
arahy.Tifrunner.gnm1.ann1.E2GYEM Arachis hypogaea HOM05D024102 ORTHO05D026936 5.1e-06 55.1 44 63.6
arahy.Tifrunner.gnm1.ann1.H9HLSW Arachis hypogaea HOM05D000162 ORTHO05D000090 5.1e-06 55.1 44 63.6


User provided reference genes

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