Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1198 Acer truncatum HOM05D001576 ORTHO05D000401 8.4e-54 213.4 105 100.0
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 2.8e-17 92.0 95 53.7
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 1.4e-16 89.7 91 53.8
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-15 86.7 101 43.6
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.2e-15 86.7 89 50.6
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-15 85.9 101 44.6
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-15 85.9 101 44.6
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.7e-15 85.5 87 49.4
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.9e-15 84.3 101 43.6
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.9e-15 84.3 101 43.6
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.9e-15 84.3 101 43.6
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.9e-15 84.3 101 43.6
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.9e-15 84.3 101 43.6
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.5e-13 77.0 101 40.6
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.1e-12 74.3 90 48.9
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.1e-12 74.3 90 48.9
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.1e-12 74.3 90 48.9
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.1e-12 74.3 90 48.9
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 1.8e-11 72.8 101 43.6
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-11 72.4 90 47.8
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-11 72.4 90 47.8
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.3e-11 72.4 93 43.0
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.2e-10 70.1 88 46.6
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.2e-10 70.1 102 43.1
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.2e-10 70.1 91 47.3
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.5e-10 69.7 89 48.3
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.0e-10 69.3 93 41.9
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.4e-10 68.6 90 44.4
Prupe.1G172500 Prunus persica HOM05D001576 ORTHO05D000401 4.4e-10 68.2 90 41.1
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 9.8e-10 67.0 81 46.9
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 1.3e-09 66.6 100 38.0
TWI18G0820 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.3e-09 66.6 90 44.4
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.7e-09 66.2 65 50.8
Potri.005G239150 Populus trichocarpa HOM05D001576 ORTHO05D000401 1.7e-09 66.2 106 36.8
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 1.7e-09 66.2 100 41.0
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.7e-09 66.2 80 45.0
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.7e-09 66.2 80 45.0
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 2.2e-09 65.9 80 43.8
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 2.2e-09 65.9 80 43.8
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 6.3e-09 64.3 101 40.6
TWI36G0193 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 6.3e-09 64.3 104 46.2
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 8.3e-09 63.9 86 44.2
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.3e-09 63.9 94 41.5
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.4e-08 62.4 91 41.8
DCAR_018442 Daucus carota HOM05D003696 ORTHO05D005158 3.1e-08 62.0 91 39.6
TWI12G1451 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.1e-08 62.0 90 42.2
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.2e-08 60.5 91 39.6
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.2e-08 60.5 91 39.6
TWI38G0936 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.6e-07 59.7 82 41.5
TWI53G0679 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.7e-07 57.4 90 42.2
TWI73G0140 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.7e-07 57.4 90 42.2
TWI75G0594 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.7e-07 57.4 91 36.3
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.0e-06 57.0 88 39.8
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 2.3e-06 55.8 96 36.5
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 2.3e-06 55.8 96 36.5
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 3.8e-06 55.1 100 35.0
Rhsim13G0070800 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.0e-06 54.7 87 39.1
TWI14G0851 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.0e-06 54.7 76 48.7
vmacro03831 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 6.6e-06 54.3 108 37.0
CiPaw.12G041600 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 53.9 105 30.5
Rhsim09G0057800 Rhododendron simsii HOM05D000003 ORTHO05D000283 8.6e-06 53.9 73 42.5
SHI14130 Sapria himalayana HOM05D002453 ORTHO05D002107 8.6e-06 53.9 63 47.6


User provided reference genes

Program Settings