Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 7.8e-76 287.3 179 100.0
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 5.5e-37 158.3 154 58.4
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.2e-36 157.1 158 55.7
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 6.1e-36 154.8 158 58.2
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.5e-34 150.2 165 53.3
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.5e-34 150.2 165 53.3
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.6e-34 149.4 165 52.7
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 5.7e-34 148.3 160 56.2
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 2.2e-33 146.4 152 52.6
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 4.8e-33 145.2 148 53.4
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 6.3e-33 144.8 160 51.9
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.4e-32 143.7 162 52.5
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 3.1e-32 142.5 180 51.7
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 4.1e-32 142.1 155 51.0
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 5.3e-32 141.7 160 50.0
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 9.1e-32 141.0 149 52.3
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 2.0e-31 139.8 150 50.7
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.6e-31 139.4 153 51.0
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.5e-31 139.0 140 62.9
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 4.5e-31 138.7 151 50.3
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 7.7e-31 137.9 154 51.9
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.0e-30 137.5 164 51.8
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.0e-30 137.5 166 51.2
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 5.0e-30 135.2 155 55.5
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.5e-30 134.4 167 47.3
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 8.5e-30 134.4 157 51.6
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 1.1e-29 134.0 172 47.7
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.9e-29 133.3 169 55.6
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 1.9e-29 133.3 147 47.6
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.9e-29 133.3 159 51.6
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 7.2e-29 131.3 156 48.1
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 9.4e-29 131.0 150 50.0
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 9.4e-29 131.0 159 47.8
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.2e-28 130.6 138 50.7
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.6e-28 130.2 142 48.6
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 2.1e-28 129.8 152 51.3
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 3.6e-28 129.0 167 45.5
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 2.3e-27 126.3 139 51.8
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.5e-26 123.6 176 43.8
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.5e-26 123.6 176 43.8
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 5.7e-26 121.7 144 47.9
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 8.2e-25 117.9 160 46.2
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 1.4e-24 117.1 171 42.1
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.8e-24 116.7 148 47.3
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 2.4e-24 116.3 140 50.7
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 4.1e-24 115.5 152 55.9
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 7.0e-24 114.8 149 47.0
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 9.1e-24 114.4 152 46.1
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 2.6e-23 112.8 176 49.4
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.3e-22 110.5 148 54.7
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 2.9e-22 109.4 152 48.0
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 5.0e-22 108.6 150 50.7
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 6.5e-22 108.2 147 45.6
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 8.5e-22 107.8 154 45.5
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 8.5e-22 107.8 154 45.5
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 8.5e-22 107.8 170 40.6
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.1e-21 107.5 126 48.4
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.1e-21 107.5 161 45.3
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 2.5e-21 106.3 153 44.4
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 2.5e-21 106.3 153 44.4
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.6e-20 103.6 149 43.0
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 2.7e-20 102.8 180 46.7
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 2.7e-20 102.8 180 47.2
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 4.7e-20 102.1 142 56.3
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 6.1e-20 101.7 136 47.8
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 8.0e-20 101.3 144 41.0
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 8.0e-20 101.3 168 47.6
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.4e-19 100.5 149 42.3
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 3.0e-19 99.4 149 41.6
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 3.0e-19 99.4 149 41.6
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 3.0e-19 99.4 149 41.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 3.0e-19 99.4 139 44.6
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 6.8e-19 98.2 142 54.2
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 4.4e-18 95.5 83 59.0
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 5.7e-18 95.1 136 44.1
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 5.7e-18 95.1 136 44.1
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 7.5e-18 94.7 135 45.2
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-17 94.0 82 59.8
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.7e-17 93.6 150 41.3
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.2e-17 93.2 141 44.0
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 2.8e-17 92.8 143 43.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 6.3e-17 91.7 140 43.6
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 4.1e-16 89.0 148 43.2
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 5.4e-16 88.6 157 40.1
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 7.7e-15 84.7 145 40.7
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 7.7e-15 84.7 140 40.0
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.3e-14 84.0 165 37.6
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.7e-14 83.6 126 44.4
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.9e-14 82.8 164 37.2
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.9e-14 82.8 164 37.2
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 8.5e-14 81.3 154 39.0
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.2e-12 77.4 163 37.4
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 1.2e-12 77.4 133 38.3
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 1.2e-12 77.4 189 34.4
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.6e-12 77.0 172 36.6
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.6e-12 77.0 58 65.5
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 1.6e-12 77.0 155 36.1
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.6e-12 77.0 151 35.8
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.0e-11 74.3 175 35.4
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 1.0e-11 74.3 157 45.9
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.0e-11 72.4 130 36.2
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 4.0e-11 72.4 154 35.1
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 8.8e-11 71.2 49 67.3
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.5e-10 70.5 48 66.7
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 2.6e-10 69.7 57 56.1
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 4.4e-10 68.9 63 57.1
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 4.4e-10 68.9 148 36.5
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 7.5e-10 68.2 149 33.6
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 9.8e-10 67.8 127 37.0
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-09 67.4 158 36.1
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 2.2e-09 66.6 124 35.5
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 2.8e-09 66.2 142 33.8
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 2.8e-09 66.2 39 71.8
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 2.8e-09 66.2 48 66.7
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 3.7e-09 65.9 36 83.3
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 1.4e-08 63.9 55 58.2
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 4.1e-08 62.4 49 63.3
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 9.1e-08 61.2 35 80.0
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 1.0e-06 57.8 52 59.6
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 1.7e-06 57.0 123 35.8


User provided reference genes

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