Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 2.2e-160 569.3 379 100.0
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 2.1e-70 270.4 417 52.0
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 2.0e-65 253.8 437 51.5
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 6.8e-61 238.8 423 50.4
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 3.4e-60 236.5 403 51.4
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 7.5e-60 235.3 402 49.0
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 4.1e-58 229.6 410 47.1
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 7.0e-58 228.8 404 48.0
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 7.0e-58 228.8 427 48.0
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 7.0e-58 228.8 427 48.0
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 3.5e-57 226.5 422 43.1
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 5.9e-57 225.7 424 48.8
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 5.9e-57 225.7 424 48.8
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 3.8e-56 223.0 373 45.0
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 8.6e-56 221.9 460 40.7
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 8.6e-56 221.9 407 46.2
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 4.3e-55 219.5 276 52.2
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 4.3e-55 219.5 422 44.1
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 4.3e-55 219.5 425 47.5
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 4.3e-55 219.5 430 50.0
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 5.6e-55 219.2 329 49.8
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 5.6e-55 219.2 382 52.6
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 7.3e-55 218.8 386 48.4
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.6e-54 217.6 398 53.3
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.6e-54 217.6 428 43.2
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 6.1e-54 215.7 422 52.1
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 1.4e-53 214.5 442 41.6
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 1.8e-53 214.2 485 43.7
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.3e-53 213.8 433 45.0
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 2.3e-53 213.8 430 48.4
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 2.3e-53 213.8 430 42.8
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 5.2e-53 212.6 432 45.6
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 8.9e-53 211.8 506 39.3
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 8.9e-53 211.8 415 52.0
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 1.2e-52 211.5 381 52.2
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 4.4e-52 209.5 437 45.5
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.7e-51 207.6 432 48.6
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 2.9e-51 206.8 419 44.4
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.4e-50 204.5 398 44.7
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 1.9e-50 204.1 398 43.2
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 4.1e-50 203.0 396 51.5
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 7.0e-50 202.2 373 51.2
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 1.6e-49 201.1 441 41.7
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 2.7e-49 200.3 427 44.0
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 4.6e-49 199.5 316 49.1
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 4.6e-49 199.5 314 49.7
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 7.8e-49 198.7 362 53.9
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.0e-48 198.4 459 41.2
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.7e-48 197.6 473 38.9
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 2.3e-48 197.2 366 45.4
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 5.0e-48 196.1 438 44.1
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 5.0e-48 196.1 402 42.0
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 5.0e-48 196.1 391 43.7
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 8.6e-48 195.3 396 48.5
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 1.1e-47 194.9 408 44.9
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.9e-47 194.1 379 44.9
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 4.3e-47 193.0 270 51.5
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 2.1e-46 190.7 420 42.1
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 2.8e-46 190.3 309 49.8
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 6.2e-46 189.1 437 35.7
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 1.4e-45 188.0 306 50.0
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 1.8e-45 187.6 392 44.9
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 2.3e-45 187.2 380 47.9
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 5.2e-45 186.0 414 41.5
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 1.2e-44 184.9 392 45.2
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 2.0e-44 184.1 434 40.1
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 2.6e-44 183.7 388 46.4
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 3.4e-44 183.3 361 43.2
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 5.8e-44 182.6 442 38.5
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 9.8e-44 181.8 402 44.5
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 1.7e-43 181.0 481 37.8
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 2.2e-43 180.6 391 51.7
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 2.2e-43 180.6 302 44.7
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 1.9e-42 177.6 261 46.7
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 1.9e-42 177.6 408 42.6
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 9.2e-42 175.3 409 42.8
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.7e-40 171.0 417 42.7
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 6.6e-40 169.1 116 72.4
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 1.1e-39 168.3 280 44.3
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 3.3e-39 166.8 413 42.1
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 3.3e-39 166.8 263 44.5
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 3.1e-37 160.2 309 51.5
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 3.1e-37 160.2 123 69.1
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 5.2e-37 159.5 365 36.7
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 8.9e-37 158.7 414 40.8
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 8.9e-37 158.7 320 41.9
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 1.5e-36 157.9 397 40.1
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 2.6e-36 157.1 95 75.8
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 3.4e-36 156.8 114 71.1
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 5.8e-36 156.0 392 35.2
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 9.9e-36 155.2 393 38.7
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 3.7e-35 153.3 352 46.9
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 6.4e-35 152.5 126 65.9
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-34 151.8 110 70.9
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 9.2e-34 148.7 111 68.5
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 2.1e-33 147.5 112 67.9
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 3.9e-32 143.3 408 39.0
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 4.3e-31 139.8 357 40.3
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 6.2e-30 136.0 434 31.6
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 4.0e-29 133.3 444 41.0
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 3.4e-28 130.2 137 55.5
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 5.8e-28 129.4 76 84.2
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 5.8e-28 129.4 121 54.5
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.4e-26 124.8 320 39.4
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 3.2e-26 123.6 355 42.8
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 4.2e-26 123.2 137 52.6
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 6.6e-24 115.9 127 49.6
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 1.2e-22 111.7 344 40.1
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 1.6e-22 111.3 64 81.2
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 8.1e-22 109.0 315 33.7
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 4.0e-21 106.7 130 47.7
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 1.1e-18 98.6 54 83.3
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 4.2e-18 96.7 61 80.3
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 2.1e-17 94.4 54 81.5
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 5.6e-15 86.3 54 75.9
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 2.8e-14 84.0 52 76.9
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 6.2e-14 82.8 208 36.5
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 2.6e-12 77.4 387 30.5
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 7.6e-12 75.9 60 60.0
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 1.0e-08 65.5 85 37.6


User provided reference genes

Program Settings