Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.854 Acer truncatum HOM05D008181 ORTHO05D010459 1.3e-104 383.3 214 100.0
Atru.chr2.2590 Acer truncatum HOM05D008181 ORTHO05D010459 7.4e-97 357.5 178 95.5
Atru.chr6.965 Acer truncatum HOM05D000028 ORTHO05D001343 5.7e-41 171.8 101 81.2
Atru.chr4.282 Acer truncatum HOM05D008181 ORTHO05D010459 5.4e-39 165.2 159 52.2
Atru.chr5.1893 Acer truncatum HOM05D008181 ORTHO05D010459 9.2e-39 164.5 178 47.8
Atru.chr8.857 Acer truncatum HOM05D008181 ORTHO05D010459 1.7e-21 107.1 164 36.6
Thecc.01G188500 Theobroma cacao HOM05D008181 ORTHO05D010459 3.8e-16 89.4 152 35.5
Thecc.04G148800 Theobroma cacao HOM05D008181 ORTHO05D010459 1.4e-15 87.4 148 37.2
Thecc.04G032800 Theobroma cacao HOM05D008181 ORTHO05D010459 9.2e-15 84.7 148 34.5
Thecc.10G113200 Theobroma cacao HOM05D008181 ORTHO05D010459 3.5e-14 82.8 132 37.9
SGA_v2.0_scaffold954G53748 Striga asiatica HOM05D011572 ORTHO05D010459 1.0e-13 81.3 151 29.1
Thecc.10G054600 Theobroma cacao HOM05D008181 ORTHO05D010459 3.0e-13 79.7 133 34.6
Atru.chr7.61 Acer truncatum HOM05D008181 ORTHO05D010459 6.6e-13 78.6 167 34.1
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 1.1e-12 77.8 157 33.8
Atru.chr5.2512 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-12 77.4 75 50.7
SGA_v2.0_scaffold365G50015 Striga asiatica HOM05D011572 ORTHO05D012893 1.2e-11 74.3 158 27.8
Thecc.07G175000 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-11 73.9 143 34.3
CANSAT35G1946 Cannabis sativa HOM05D009344 ORTHO05D001269 2.1e-11 73.6 180 29.4
HanXRQChr04g0099501 Helianthus annuus HOM05D010915 ORTHO05D010404 3.6e-11 72.8 161 30.4
HanXRQChr04g0099531 Helianthus annuus HOM05D010915 ORTHO05D010404 1.1e-10 71.2 168 27.4
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 4.0e-10 69.3 147 29.9
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.9e-10 68.6 155 28.4
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.9e-10 68.2 155 28.4
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.9e-10 68.2 155 28.4
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.9e-10 68.2 140 29.3
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 1.2e-09 67.8 155 29.7
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 1.2e-09 67.8 155 29.7
HanXRQChr04g0099511 Helianthus annuus HOM05D010915 ORTHO05D010404 2.0e-09 67.0 169 26.0
Thecc.06G057400 Theobroma cacao HOM05D008181 ORTHO05D010459 2.0e-09 67.0 146 28.8
Atru.chr9.1115 Acer truncatum HOM05D008181 ORTHO05D010459 2.6e-09 66.6 151 31.8
SGA_v2.0_scaffold491G52433 Striga asiatica HOM05D008585 ORTHO05D000397 2.6e-09 66.6 161 28.0
Oeu037738.1 Olea europaea HOM05D002262 ORTHO05D000482 4.4e-09 65.9 167 28.7
THA.LOC104798704 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.8e-09 65.5 155 27.7
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.8e-09 65.5 140 28.6
CANSAT35G1833 Cannabis sativa HOM05D009344 ORTHO05D001269 7.6e-09 65.1 150 30.0
Thecc.02G036800 Theobroma cacao HOM05D008181 ORTHO05D010459 1.3e-08 64.3 119 33.6
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.7e-08 63.9 155 29.0
SGA_v2.0_scaffold164G38150 Striga asiatica HOM05D008585 ORTHO05D000397 2.2e-08 63.5 156 27.6
Lsat_1_v5_gn_4_99201 Lactuca sativa HOM05D009439 ORTHO05D010827 2.9e-08 63.2 154 27.9
Oeu027636.1 Olea europaea HOM05D002749 ORTHO05D000708 2.9e-08 63.2 167 28.7
SGA_v2.0_scaffold3G01660 Striga asiatica HOM05D008585 ORTHO05D000397 2.9e-08 63.2 162 27.2
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 3.8e-08 62.8 145 28.3
CANSAT56G2211 Cannabis sativa HOM05D009344 ORTHO05D001269 4.9e-08 62.4 151 29.1
SGA_v2.0_scaffold12G06039 Striga asiatica HOM05D008585 ORTHO05D000397 4.9e-08 62.4 167 27.5
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 6.4e-08 62.0 155 28.4
Lsat_1_v5_gn_4_153261 Lactuca sativa HOM05D009439 ORTHO05D010404 6.4e-08 62.0 165 24.8
CANSAT54G0280 Cannabis sativa HOM05D009344 ORTHO05D001269 1.1e-07 61.2 130 31.5
CANSAT64G1497 Cannabis sativa HOM05D009344 ORTHO05D001269 1.1e-07 61.2 127 32.3
Oeu014738.1 Olea europaea HOM05D002749 ORTHO05D000708 1.1e-07 61.2 168 29.2
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.1e-07 61.2 165 27.3
SGA_v2.0_scaffold9G04779 Striga asiatica HOM05D008585 ORTHO05D000397 1.4e-07 60.8 161 27.3
Lsat_1_v5_gn_6_59841 Lactuca sativa HOM05D009439 ORTHO05D010404 2.4e-07 60.1 165 24.8
CANSAT01G0062 Cannabis sativa HOM05D008058 ORTHO05D001269 3.2e-07 59.7 131 29.8
SGA_v2.0_scaffold41G15715 Striga asiatica HOM05D008585 ORTHO05D000397 3.2e-07 59.7 156 25.0
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.4e-07 58.9 170 28.2
Oeu045265.1 Olea europaea HOM05D002749 ORTHO05D000708 5.4e-07 58.9 168 29.2
Oeu045767.1 Olea europaea HOM05D006164 ORTHO05D001269 5.4e-07 58.9 125 30.4
Oeu048688.1 Olea europaea HOM05D002749 ORTHO05D000708 5.4e-07 58.9 171 29.2
THA.LOC104798881 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.4e-07 58.9 126 29.4
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.4e-07 58.9 156 27.6
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 7.1e-07 58.5 179 27.4
CANSAT54G2680 Cannabis sativa HOM05D002262 ORTHO05D000482 7.1e-07 58.5 159 31.4
CANSAT92G0002 Cannabis sativa HOM05D009344 ORTHO05D001269 7.1e-07 58.5 143 29.4
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 7.1e-07 58.5 145 27.6
Oeu037089.1 Olea europaea HOM05D002262 ORTHO05D000708 7.1e-07 58.5 167 26.3
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 7.1e-07 58.5 161 26.7
SGA_v2.0_scaffold63G21779 Striga asiatica HOM05D008585 ORTHO05D000397 9.3e-07 58.2 155 25.8
CANSAT01G2042 Cannabis sativa HOM05D009344 ORTHO05D001269 1.2e-06 57.8 127 29.9
CANSAT78G1060 Cannabis sativa HOM05D009344 ORTHO05D001269 1.2e-06 57.8 143 27.3
CANSAT78G1294 Cannabis sativa HOM05D009344 ORTHO05D001269 1.2e-06 57.8 150 26.7
CANSAT21G1675 Cannabis sativa HOM05D009344 ORTHO05D001269 1.6e-06 57.4 150 26.7
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 1.6e-06 57.4 161 28.0
Thecc.09G121600 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-06 57.4 164 28.0
Atru.chr11.709 Acer truncatum HOM05D008181 ORTHO05D010459 2.1e-06 57.0 147 27.2
CANSAT01G3114 Cannabis sativa HOM05D009344 ORTHO05D001269 2.7e-06 56.6 145 26.9
CANSAT11G2391 Cannabis sativa HOM05D009344 ORTHO05D001269 3.5e-06 56.2 167 25.7
Thecc.07G043200 Theobroma cacao HOM05D008181 ORTHO05D010459 3.5e-06 56.2 146 26.0
CANSAT21G1491 Cannabis sativa HOM05D001081 ORTHO05D001269 4.6e-06 55.8 150 24.7
Oeu038220.1 Olea europaea HOM05D002262 ORTHO05D000482 4.6e-06 55.8 173 28.3
CANSAT35G0637 Cannabis sativa HOM05D009344 ORTHO05D001269 6.0e-06 55.5 127 30.7
Lsat_1_v5_gn_5_62540 Lactuca sativa HOM05D009439 ORTHO05D010404 6.0e-06 55.5 168 25.6
CANSAT54G1186 Cannabis sativa HOM05D008058 ORTHO05D001269 7.8e-06 55.1 149 26.8
Oeu046189.1 Olea europaea HOM05D002749 ORTHO05D000708 7.8e-06 55.1 176 29.0


User provided reference genes

Program Settings