Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.1e-184 649.8 329 100.0
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 2.4e-147 525.8 315 83.2
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 5.4e-139 498.0 322 76.7
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.7e-138 495.7 325 76.6
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 7.8e-138 494.2 325 76.3
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 3.3e-136 488.8 324 74.7
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.7e-135 485.0 325 76.0
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 2.3e-134 482.6 325 75.4
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 6.8e-134 481.1 312 77.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 2.0e-133 479.6 325 74.8
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.1e-131 473.8 305 76.7
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.2e-131 472.2 338 72.2
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.6e-130 469.9 299 77.3
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.1e-128 463.8 326 72.7
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 2.8e-127 459.1 308 74.7
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.8e-127 459.1 322 69.9
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 4.7e-127 458.4 327 69.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 8.1e-127 457.6 321 71.3
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-126 457.2 332 71.7
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.1e-126 457.2 321 72.0
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.1e-126 457.2 322 70.5
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.1e-126 457.2 323 71.5
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 3.1e-126 455.7 328 69.5
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 5.2e-126 454.9 347 68.6
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.2e-125 453.8 322 68.9
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.2e-125 453.8 327 70.9
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 2.6e-125 452.6 326 72.1
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 4.4e-125 451.8 286 74.8
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 9.9e-125 450.7 316 71.8
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 8.3e-124 447.6 320 71.2
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 1.1e-123 447.2 340 67.4
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 3.2e-123 445.7 325 69.2
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 4.1e-123 445.3 320 70.3
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 7.1e-123 444.5 327 68.5
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.5e-122 442.2 317 71.6
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.0e-121 440.7 287 73.9
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 5.1e-121 438.3 285 73.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 8.6e-121 437.6 318 66.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 8.6e-121 437.6 288 72.9
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 5.6e-120 434.9 325 68.6
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 2.8e-119 432.6 314 67.8
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 2.8e-119 432.6 314 66.9
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.2e-117 427.2 325 65.8
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.5e-117 426.8 325 67.7
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 2.4e-115 419.5 326 65.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.4e-115 419.5 333 65.5
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 4.1e-115 418.7 310 67.4
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.2e-114 417.2 372 59.9
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.7e-114 416.0 304 68.4
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 2.3e-113 412.9 308 68.5
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.1e-113 411.8 321 66.0
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.1e-112 410.6 311 66.9
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 3.3e-112 409.1 324 65.4
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.3e-112 408.7 321 65.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 5.6e-112 408.3 308 67.2
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 7.3e-112 407.9 263 76.0
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.2e-111 407.1 297 67.7
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.2e-111 407.1 281 71.5
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.2e-111 407.1 319 65.5
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.6e-111 406.8 286 71.3
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 3.6e-111 405.6 309 66.3
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 4.7e-111 405.2 281 71.5
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 4.7e-111 405.2 281 71.5
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.1e-110 404.1 286 71.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.1e-110 404.1 331 64.0
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.1e-110 404.1 304 68.1
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.8e-110 403.3 264 74.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 3.1e-110 402.5 235 81.7
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 4.0e-110 402.1 303 67.3
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 4.0e-110 402.1 308 66.9
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.6e-109 399.4 324 63.6
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 9.9e-109 397.5 324 63.6
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.3e-108 397.1 286 68.5
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.3e-108 397.1 286 68.5
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 8.4e-108 394.4 277 69.7
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.9e-107 393.3 323 62.5
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 9.3e-107 391.0 308 64.6
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 9.3e-107 391.0 273 71.8
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.3e-105 386.3 312 64.7
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 3.9e-105 385.6 325 63.1
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 6.6e-105 384.8 236 78.8
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.3e-103 380.6 276 71.0
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 2.1e-103 379.8 326 61.0
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.1e-102 377.5 329 59.6
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.7e-100 370.2 322 60.2
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.9e-100 369.4 290 67.2
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.9e-99 366.7 266 70.7
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.6e-98 363.6 220 77.7
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.7e-98 362.8 245 72.2
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 3.7e-95 352.4 219 76.3
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.7e-95 352.4 319 58.6
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 3.1e-94 349.4 314 59.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 7.6e-93 344.7 319 56.1
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.8e-92 342.4 270 63.0
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 8.4e-92 341.3 284 59.9
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.4e-91 340.5 224 75.0
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.0e-89 334.3 319 54.5
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.3e-89 334.0 215 75.8
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.4e-86 323.2 230 67.4
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 4.2e-83 312.4 299 54.8
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.8e-81 307.0 181 79.0
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 5.1e-81 305.4 241 60.2
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 6.5e-76 288.5 166 80.1
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.9e-72 276.9 282 53.2
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 4.3e-72 275.8 236 61.0
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 7.4e-72 275.0 233 58.8
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 2.6e-56 223.4 255 47.1
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.4e-54 217.6 190 60.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.7e-50 202.6 154 61.7
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.2e-44 183.7 262 42.0
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.8e-41 174.1 142 61.3
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 5.2e-41 172.6 269 41.3
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.7e-36 157.5 155 53.5
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.3e-28 130.6 123 56.1
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 5.6e-27 125.9 71 85.9
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 2.1e-13 80.9 55 65.5
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 4.6e-13 79.7 58 65.5
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 6.6e-12 75.9 50 68.0


User provided reference genes

Program Settings