Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 6.0e-52 207.2 104 100.0
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 7.6e-47 190.3 104 88.5
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 1.3e-46 189.5 104 86.5
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 2.2e-46 188.7 104 87.5
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 2.2e-46 188.7 104 87.5
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 1.9e-45 185.7 105 87.6
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 5.4e-45 184.1 104 85.6
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 7.1e-45 183.7 99 88.9
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 2.1e-44 182.2 103 82.5
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 2.1e-44 182.2 102 86.3
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 2.1e-44 182.2 105 85.7
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 3.5e-44 181.4 104 88.5
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 4.6e-44 181.0 102 85.3
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 4.6e-44 181.0 102 85.3
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 4.6e-44 181.0 104 84.6
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 6.0e-44 180.6 105 85.7
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 7.9e-44 180.3 101 86.1
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.0e-43 179.9 104 83.7
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.0e-43 179.9 101 88.1
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 1.3e-43 179.5 102 84.3
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.7e-43 179.1 104 83.7
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.7e-43 179.1 104 80.8
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 1.7e-43 179.1 104 84.6
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 3.9e-43 177.9 102 85.3
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 3.9e-43 177.9 104 83.7
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 5.1e-43 177.6 104 82.7
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 5.1e-43 177.6 104 83.7
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.1e-42 176.4 104 82.7
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 1.5e-42 176.0 102 84.3
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 3.3e-42 174.9 102 81.4
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 4.3e-42 174.5 104 82.7
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 4.3e-42 174.5 105 83.8
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 5.6e-42 174.1 104 81.7
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 7.3e-42 173.7 104 82.7
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 9.6e-42 173.3 104 80.8
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.3e-41 172.9 104 81.7
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.1e-41 172.2 100 83.0
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 3.6e-41 171.4 104 79.8
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 4.8e-41 171.0 99 83.8
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 8.1e-41 170.2 103 81.6
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.1e-40 169.9 104 79.8
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 1.1e-40 169.9 104 76.9
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 2.4e-40 168.7 104 78.8
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 3.1e-40 168.3 104 77.9
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 4.0e-40 167.9 101 79.2
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.0e-40 167.9 101 80.2
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 5.3e-40 167.5 104 78.8
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 2.0e-39 165.6 104 77.9
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 2.6e-39 165.2 100 83.0
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 3.4e-39 164.9 103 78.6
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 7.6e-39 163.7 104 76.9
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.7e-38 162.5 95 84.2
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 2.9e-38 161.8 95 85.3
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.9e-38 161.8 98 78.6
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 3.8e-38 161.4 100 80.0
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 1.4e-37 159.5 92 83.7
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 1.9e-37 159.1 102 75.5
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 2.4e-37 158.7 95 83.2
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 7.1e-37 157.1 102 76.5
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 9.3e-37 156.8 99 76.8
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 9.3e-37 156.8 104 70.2
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.8e-35 152.5 92 79.3
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 2.3e-35 152.1 104 68.3
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 2.3e-35 152.1 104 72.1
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 5.1e-35 151.0 90 81.1
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 5.1e-35 151.0 100 74.0
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 6.7e-35 150.6 100 74.0
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 6.7e-35 150.6 92 78.3
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.1e-34 149.8 92 78.3
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.1e-34 149.8 92 79.3
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 1.5e-34 149.4 92 78.3
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 2.5e-34 148.7 90 78.9
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 2.5e-34 148.7 90 78.9
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 3.3e-34 148.3 99 70.7
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 4.3e-34 147.9 92 77.2
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 9.6e-34 146.7 103 72.8
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 9.6e-34 146.7 89 78.7
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 1.3e-33 146.4 92 76.1
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 1.6e-33 146.0 92 76.1
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 1.6e-33 146.0 90 77.8
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.6e-33 146.0 105 68.6
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 2.1e-33 145.6 90 77.8
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 1.4e-32 142.9 99 71.7
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 1.4e-32 142.9 102 70.6
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 9.0e-32 140.2 92 73.9
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 3.4e-31 138.3 76 89.5
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 5.8e-31 137.5 94 73.4
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 3.8e-30 134.8 76 88.2
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 8.4e-30 133.7 93 69.9
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 1.1e-29 133.3 76 84.2
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 1.4e-29 132.9 89 70.8
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 3.2e-29 131.7 91 71.4
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.6e-28 129.4 100 66.0
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 6.0e-28 127.5 90 73.3
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 1.3e-27 126.3 76 81.6
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 3.0e-27 125.2 75 82.7
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 6.7e-27 124.0 76 80.3
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 8.7e-27 123.6 79 75.9
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 2.5e-26 122.1 80 77.5
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 6.2e-25 117.5 64 89.1
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 8.2e-25 117.1 74 78.4
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 2.4e-24 115.5 74 77.0
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 6.9e-24 114.0 75 76.0
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.5e-23 112.8 100 57.0
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 7.6e-23 110.5 93 62.4
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 6.5e-22 107.5 78 69.2
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 3.5e-20 101.7 73 68.5
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 6.1e-20 100.9 64 79.7
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 3.9e-19 98.2 96 52.1
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.1e-18 96.7 62 80.6
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.4e-16 89.7 75 61.3
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 2.4e-16 89.0 78 56.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 5.9e-15 84.3 98 46.9
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 7.7e-15 84.0 87 50.6
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 2.9e-14 82.0 52 75.0
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 4.2e-13 78.2 87 49.4
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 1.6e-12 76.3 86 51.2
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 1.5e-07 59.7 80 38.8
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 3.4e-07 58.5 37 70.3
BolC9t57826H Brassica oleracea HOM05D006914 ORTHO05D008583 1.7e-06 56.2 29 82.8
BraA10t43605Z Brassica rapa HOM05D006914 ORTHO05D008583 5.0e-06 54.7 30 80.0


User provided reference genes

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