Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 9.9e-80 300.1 152 100.0
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.5e-56 223.0 153 73.2
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.2e-53 213.4 154 67.5
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 2.1e-53 212.6 150 68.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 2.3e-52 209.1 155 67.7
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.9e-52 208.4 154 66.2
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 8.8e-52 207.2 153 66.0
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 2.0e-51 206.1 154 64.9
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 4.4e-51 204.9 156 64.7
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 9.7e-51 203.8 155 65.8
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 9.7e-51 203.8 143 70.6
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.7e-50 203.0 155 65.2
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 2.2e-50 202.6 154 66.2
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 3.7e-50 201.8 153 64.7
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 8.2e-50 200.7 154 63.6
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.1e-49 200.3 151 65.6
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.1e-49 200.3 152 66.4
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.8e-49 199.5 152 66.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 4.1e-49 198.4 145 67.6
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 4.1e-49 198.4 154 63.6
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.2e-48 196.8 155 63.9
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 2.0e-48 196.1 151 64.2
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 7.7e-48 194.1 155 61.3
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.7e-47 193.0 157 61.8
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 3.8e-47 191.8 155 60.6
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 3.8e-47 191.8 158 60.1
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 5.0e-47 191.4 153 61.4
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 5.0e-47 191.4 163 60.1
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 5.0e-47 191.4 151 61.6
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 6.5e-47 191.0 153 62.7
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 8.5e-47 190.7 170 60.0
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 8.5e-47 190.7 151 61.6
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.1e-46 190.3 146 63.0
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.9e-46 189.5 151 60.3
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 4.2e-46 188.3 142 65.5
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 5.5e-46 188.0 153 58.2
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 5.5e-46 188.0 143 63.6
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 7.2e-46 187.6 153 59.5
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 9.4e-46 187.2 143 65.0
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.2e-45 186.8 150 60.7
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 1.6e-45 186.4 151 60.3
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 3.6e-45 185.3 155 60.0
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 3.6e-45 185.3 153 58.2
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 4.7e-45 184.9 154 58.4
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 6.1e-45 184.5 155 60.6
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.8e-44 183.0 146 61.0
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.3e-44 182.6 152 58.6
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 3.0e-44 182.2 151 57.0
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 6.7e-44 181.0 152 55.3
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.1e-43 180.3 154 54.5
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.1e-43 180.3 145 62.1
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.5e-43 179.9 153 56.9
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.5e-43 179.9 153 56.9
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.5e-43 179.9 153 56.9
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 2.0e-43 179.5 147 61.2
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 2.0e-43 179.5 147 59.2
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 2.6e-43 179.1 146 58.9
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 3.3e-43 178.7 155 56.8
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 3.3e-43 178.7 148 60.1
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 9.7e-43 177.2 155 55.5
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 9.7e-43 177.2 135 62.2
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.3e-42 176.8 155 59.4
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.3e-42 176.8 154 53.9
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.7e-42 176.4 146 58.2
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.2e-42 176.0 155 58.7
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.1e-41 173.7 150 57.3
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.4e-41 173.3 132 64.4
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 2.4e-41 172.6 135 64.4
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.4e-41 172.6 152 57.2
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 2.4e-41 172.6 143 56.6
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 2.4e-41 172.6 186 50.0
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 4.1e-41 171.8 168 52.4
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.2e-40 170.2 144 59.0
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.6e-40 169.9 151 56.3
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 2.6e-40 169.1 142 57.7
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 5.9e-40 167.9 152 55.9
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 5.9e-40 167.9 152 55.9
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 5.9e-40 167.9 179 50.3
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.0e-39 167.2 133 60.9
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 1.3e-39 166.8 146 56.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.5e-38 163.3 136 58.8
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 2.5e-38 162.5 137 59.9
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 2.5e-38 162.5 126 59.5
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 9.4e-38 160.6 124 60.5
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.2e-37 160.2 122 63.9
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 5.2e-36 154.8 146 51.4
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 9.7e-35 150.6 121 58.7
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.3e-34 150.2 120 64.2
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 6.3e-34 147.9 113 61.1
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.2e-32 143.7 115 60.0
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 3.5e-32 142.1 120 58.3
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 7.7e-32 141.0 149 49.0
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.3e-31 140.2 106 60.4
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 1.9e-30 136.3 146 50.0
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.6e-29 132.1 154 46.1
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 1.4e-28 130.2 114 57.0
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 8.8e-28 127.5 111 55.9
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.6e-24 116.7 127 45.7
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.0e-24 116.3 144 43.1
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 5.9e-24 114.8 148 40.5
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 7.7e-24 114.4 87 59.8
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 9.5e-22 107.5 149 40.3
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.1e-21 106.3 76 67.1
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 2.8e-21 105.9 74 64.9
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 2.8e-21 105.9 148 35.1
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 4.7e-21 105.1 71 67.6
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.8e-20 103.2 83 60.2
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.2e-20 101.7 88 61.4
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 2.0e-19 99.8 122 39.3
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 6.3e-18 94.7 79 50.6
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 9.2e-17 90.9 69 62.3
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 1.2e-13 80.5 78 53.8
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 5.7e-11 71.6 96 37.5
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 9.8e-11 70.9 73 57.5
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.7e-07 60.1 56 57.1


User provided reference genes

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