Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 2.7e-161 572.0 307 100.0
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 3.6e-113 412.1 307 72.6
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 4.9e-110 401.7 307 71.7
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 4.9e-110 401.7 303 71.3
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 3.5e-108 395.6 307 69.7
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 1.5e-106 390.2 306 68.6
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 9.6e-106 387.5 306 68.6
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.2e-105 387.1 307 69.4
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 2.8e-105 386.0 307 69.1
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 3.6e-105 385.6 306 69.0
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 8.1e-105 384.4 307 68.7
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.8e-104 383.3 305 69.2
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 5.8e-103 378.3 298 68.5
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 8.4e-102 374.4 307 68.1
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 1.4e-101 373.6 308 66.2
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.9e-101 373.2 308 65.9
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 2.4e-101 372.9 308 66.2
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 4.2e-101 372.1 303 66.7
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 1.0e-99 367.5 295 69.2
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 1.0e-99 367.5 293 67.6
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 1.3e-99 367.1 304 67.8
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 2.3e-99 366.3 300 66.7
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 6.9e-96 354.8 304 62.8
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 9.0e-96 354.4 308 64.3
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.2e-95 354.0 294 65.3
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 2.6e-95 352.8 300 63.3
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 4.5e-95 352.1 306 62.1
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 5.8e-95 351.7 292 65.1
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 2.9e-94 349.4 306 62.1
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 4.9e-94 348.6 282 69.5
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.9e-93 346.7 303 59.7
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 2.4e-93 346.3 292 64.4
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 1.7e-91 340.1 308 63.0
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 1.5e-90 337.0 292 62.7
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 7.4e-90 334.7 298 62.8
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 3.6e-89 332.4 307 62.9
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 6.9e-88 328.2 298 61.1
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 2.6e-87 326.2 274 64.6
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 1.3e-86 323.9 303 61.1
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.9e-85 320.1 305 60.3
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 2.7e-84 316.2 302 58.9
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 6.0e-84 315.1 301 59.5
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.8e-83 313.5 271 63.8
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 1.3e-81 307.4 217 73.7
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 2.1e-81 306.6 294 57.5
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 4.8e-81 305.4 306 57.5
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 1.0e-78 297.7 297 59.9
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 2.5e-77 293.1 298 56.7
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 3.5e-76 289.3 294 56.1
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 3.7e-73 279.3 297 55.6
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 2.5e-69 266.5 307 49.8
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 7.2e-69 265.0 241 63.9
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 8.7e-67 258.1 305 51.5
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.3e-65 254.2 247 59.9
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 3.1e-56 223.0 217 61.8
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 3.8e-54 216.1 206 60.2
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 3.2e-53 213.0 187 60.4
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 9.4e-37 158.3 271 40.6
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.6e-23 114.4 270 33.7
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 4.4e-18 96.3 285 28.8
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 4.4e-18 96.3 67 70.1
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 1.7e-17 94.4 275 29.5
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 2.2e-17 94.0 284 28.5
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 8.3e-17 92.0 294 28.6
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 7.3e-13 79.0 288 28.1
Lsat_1_v5_gn_2_123761 Lactuca sativa HOM05D000215 ORTHO05D008904 2.3e-11 73.9 299 25.8
Glyma.02G264200 Glycine max HOM05D000215 ORTHO05D008904 4.0e-11 73.2 275 26.2
Lalb_Chr10g0105221 Lupinus albus HOM05D000215 ORTHO05D008904 4.0e-11 73.2 275 24.0
Aqoxy3G03021 Aquilegia oxysepala HOM05D000215 ORTHO05D003454 2.6e-10 70.5 279 24.4
Migut.L00465 Erythranthe guttata HOM05D001865 ORTHO05D001815 7.5e-10 68.9 278 25.2
Pp3c9_17040 Physcomitrium patens HOM05D000215 ORTHO05D008904 1.3e-09 68.2 282 25.5
Pp3c9_17047 Physcomitrium patens HOM05D000215 ORTHO05D008904 1.3e-09 68.2 282 25.5
Eucgr.H02615 Eucalyptus grandis HOM05D000215 ORTHO05D003454 2.2e-09 67.4 273 24.2
DCAR_026544 Daucus carota HOM05D000215 ORTHO05D003454 2.9e-09 67.0 276 25.4
Rhsim12G0121400 Rhododendron simsii HOM05D000215 ORTHO05D003454 2.9e-09 67.0 280 25.0
arahy.Tifrunner.gnm1.ann1.LJ933N Arachis hypogaea HOM05D002086 ORTHO05D004968 4.9e-09 66.2 245 26.9
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 4.9e-09 66.2 202 29.2
arahy.Tifrunner.gnm1.ann1.1EF81S Arachis hypogaea HOM05D002086 ORTHO05D004968 1.4e-08 64.7 243 26.3
Sabra10G0143200 Salix brachista HOM05D000215 ORTHO05D008904 1.9e-08 64.3 285 24.6
Lj5g0014488 Lotus japonicus HOM05D002086 ORTHO05D004968 2.4e-08 63.9 281 25.6
Sp7g19440 Schrenkiella parvula HOM05D000215 ORTHO05D007108 4.1e-08 63.2 250 28.0
Thecc.02G244100 Theobroma cacao HOM05D000215 ORTHO05D003454 4.1e-08 63.2 283 27.6
AUR62008231 Chenopodium quinoa HOM05D000215 ORTHO05D003454 5.4e-08 62.8 273 24.5
Ciclev10030876m.g Citrus clementina HOM05D000215 ORTHO05D003454 5.4e-08 62.8 286 24.5
Nn1g06886 Nelumbo nucifera HOM05D000215 ORTHO05D007108 5.4e-08 62.8 204 30.4
Sc12g0005410 Simmondsia chinensis HOM05D000215 ORTHO05D003454 5.4e-08 62.8 279 25.4
AUR62030985 Chenopodium quinoa HOM05D000215 ORTHO05D003454 7.0e-08 62.4 273 24.2
PGR119G1373 Punica granatum HOM05D000215 ORTHO05D003454 7.0e-08 62.4 279 26.2
CDE01G0134 Ceratophyllum demersum HOM05D000215 ORTHO05D003454 9.2e-08 62.0 282 23.8
CDE10G1179 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 9.2e-08 62.0 278 23.4
Gohir.A03G140500 Gossypium hirsutum HOM05D000215 ORTHO05D003454 9.2e-08 62.0 277 26.4
Lj6P804T36 Lonicera japonica HOM05D000215 ORTHO05D003454 1.6e-07 61.2 272 23.9
COL.COLO4_36974 Corchorus olitorius HOM05D000215 ORTHO05D003454 2.0e-07 60.8 279 24.4
Lj3g0017268 Lotus japonicus HOM05D006338 ORTHO05D007946 2.0e-07 60.8 307 27.0
TAR629G3507 Trochodendron aralioides HOM05D000215 ORTHO05D003454 2.0e-07 60.8 277 23.5
Actinidia05554 Actinidia chinensis HOM05D000215 ORTHO05D007108 4.6e-07 59.7 230 29.1
CARHR227940 Cardamine hirsuta HOM05D000215 ORTHO05D007108 4.6e-07 59.7 269 26.8
CiPaw.10G113900 Carya illinoinensis HOM05D000215 ORTHO05D007108 4.6e-07 59.7 203 30.5
ECA246G0614 Erigeron canadensis HOM05D001816 ORTHO05D002001 4.6e-07 59.7 291 23.0
Eucgr.B00358 Eucalyptus grandis HOM05D000215 ORTHO05D003454 4.6e-07 59.7 275 23.6
Potri.004G028800 Populus trichocarpa HOM05D000215 ORTHO05D007108 4.6e-07 59.7 268 27.2
Aqoxy1G00369 Aquilegia oxysepala HOM05D006338 ORTHO05D007946 6.0e-07 59.3 293 28.3
Cpa.g.sc69.15 Carica papaya HOM05D000215 ORTHO05D003454 6.0e-07 59.3 274 23.7
CANSAT01G0385 Cannabis sativa HOM05D000215 ORTHO05D003454 7.8e-07 58.9 277 25.6
Gohir.D02G163200 Gossypium hirsutum HOM05D000215 ORTHO05D003454 7.8e-07 58.9 277 26.0
Gorai.005G183200 Gossypium raimondii HOM05D000215 ORTHO05D003454 7.8e-07 58.9 277 26.0
SMO141G0177 Selaginella moellendorffii HOM05D000215 ORTHO05D008904 7.8e-07 58.9 139 32.4
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 1.0e-06 58.5 196 29.6
TWI38G1621 Tripterygium wilfordii HOM05D000215 ORTHO05D007108 1.0e-06 58.5 214 29.0
EL10Ac5g10778 Beta vulgaris HOM05D000215 ORTHO05D003454 1.3e-06 58.2 276 25.0
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 1.3e-06 58.2 196 29.6
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 1.3e-06 58.2 196 29.6
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 1.3e-06 58.2 205 27.8
QL05p077977 Quercus lobata HOM05D000215 ORTHO05D007108 1.3e-06 58.2 281 27.4
AUR62012277 Chenopodium quinoa HOM05D000215 ORTHO05D008904 1.7e-06 57.8 272 23.9
COL.COLO4_25771 Corchorus olitorius HOM05D000215 ORTHO05D008904 1.7e-06 57.8 315 23.8
MELO3C007339.2 Cucumis melo HOM05D000215 ORTHO05D007108 1.7e-06 57.8 271 26.9
Prupe.1G255000 Prunus persica HOM05D000215 ORTHO05D003454 1.7e-06 57.8 273 22.7
Sed0010978 Sechium edule HOM05D000215 ORTHO05D007108 1.7e-06 57.8 243 28.4
Manes.17G031300 Manihot esculenta HOM05D000215 ORTHO05D007108 2.3e-06 57.4 270 27.0
Psat7g107360 Pisum sativum HOM05D000215 ORTHO05D007108 2.3e-06 57.4 280 26.4
Psat4g193800 Pisum sativum HOM05D006338 ORTHO05D007946 3.0e-06 57.0 297 25.9
Gohir.A06G208700 Gossypium hirsutum HOM05D000215 ORTHO05D007108 3.9e-06 56.6 206 28.2
Gohir.D06G212400 Gossypium hirsutum HOM05D000215 ORTHO05D007108 3.9e-06 56.6 206 28.2
Hma1.2p1_0867F.1_g230280 Hydrangea macrophylla HOM05D000215 ORTHO05D003454 3.9e-06 56.6 281 24.9
Manes.16G015200 Manihot esculenta HOM05D000215 ORTHO05D007108 3.9e-06 56.6 201 26.4
Dinv17864 Davidia involucrata HOM05D000215 ORTHO05D007108 5.0e-06 56.2 261 26.4
Sed0001105 Sechium edule HOM05D000215 ORTHO05D003454 5.0e-06 56.2 269 23.8
VMungo1215G2548 Vigna mungo HOM05D000215 ORTHO05D003454 5.0e-06 56.2 275 25.1
ClCG01G022350 Citrullus lanatus HOM05D000215 ORTHO05D007108 6.6e-06 55.8 211 28.4
CsaV3_6G049540 Cucumis sativus L. HOM05D000215 ORTHO05D007108 6.6e-06 55.8 271 26.9
Manes.06G103300 Manihot esculenta HOM05D000215 ORTHO05D003454 6.6e-06 55.8 272 22.1
VMungo0647G1728 Vigna mungo HOM05D000215 ORTHO05D008904 6.6e-06 55.8 275 24.0
Rhsim08G0170500 Rhododendron simsii HOM05D000215 ORTHO05D003454 8.6e-06 55.5 288 24.0


User provided reference genes

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