Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.2322 Acer truncatum HOM05D002602 ORTHO05D002661 2.8e-30 135.6 129 100.0
Gorai.009G011900 Gossypium raimondii HOM05D002602 ORTHO05D002661 3.1e-13 79.0 128 76.6
Duzib150G1692 Durio zibethinus HOM05D002602 ORTHO05D002661 6.8e-13 77.8 127 74.8
Gohir.A05G010900 Gossypium hirsutum HOM05D002602 ORTHO05D002661 1.5e-12 76.6 128 75.0
Gohir.D05G011600 Gossypium hirsutum HOM05D002602 ORTHO05D002661 3.4e-12 75.5 128 76.6
CiPaw.08G015900 Carya illinoinensis HOM05D002602 ORTHO05D002661 4.4e-12 75.1 129 79.1
Ciclev10008908m.g Citrus clementina HOM05D002602 ORTHO05D002661 2.2e-11 72.8 130 76.9
Sabra18G0035600 Salix brachista HOM05D002602 ORTHO05D002661 2.2e-11 72.8 129 73.6
Potri.006G246300 Populus trichocarpa HOM05D002602 ORTHO05D002661 8.3e-11 70.9 130 74.6
Aqoxy7G01832 Aquilegia oxysepala HOM05D002602 ORTHO05D002661 3.2e-10 68.9 130 68.5
Dinv30216 Davidia involucrata HOM05D002602 ORTHO05D002661 4.1e-10 68.6 132 69.7
Gohir.D13G209200 Gossypium hirsutum HOM05D002602 ORTHO05D002661 5.4e-10 68.2 129 72.9
Gorai.013G238300 Gossypium raimondii HOM05D002602 ORTHO05D002661 5.4e-10 68.2 129 72.9
Potri.018G034800 Populus trichocarpa HOM05D002602 ORTHO05D002661 7.0e-10 67.8 129 77.5
Gohir.D08G257800 Gossypium hirsutum HOM05D002602 ORTHO05D002661 1.6e-09 66.6 128 74.2
TAR626G0862 Trochodendron aralioides HOM05D002602 ORTHO05D002661 1.6e-09 66.6 129 62.0
Glyma.04G072600 Glycine max HOM05D002602 ORTHO05D002661 2.0e-09 66.2 128 72.7
RcHm_v2.0_Chr6g0312721 Rosa chinensis HOM05D002602 ORTHO05D002661 2.0e-09 66.2 128 73.4
Duzib168G0558 Durio zibethinus HOM05D002602 ORTHO05D002661 2.7e-09 65.9 128 73.4
Gohir.A08G237200 Gossypium hirsutum HOM05D002602 ORTHO05D002661 2.7e-09 65.9 128 70.3
Gohir.A13G203900 Gossypium hirsutum HOM05D002602 ORTHO05D002661 3.5e-09 65.5 129 72.1
GSVIVG01035728001 Vitis vinifera HOM05D002602 ORTHO05D002661 3.5e-09 65.5 131 66.4
Prupe.1G466300 Prunus persica HOM05D002602 ORTHO05D002661 7.8e-09 64.3 127 72.4
Duzib187G0766 Durio zibethinus HOM05D002602 ORTHO05D002661 1.0e-08 63.9 127 67.7
Glyma.06G073800 Glycine max HOM05D002602 ORTHO05D002661 1.0e-08 63.9 128 76.6
CiPaw.07G217400 Carya illinoinensis HOM05D002602 ORTHO05D002661 1.7e-08 63.2 130 75.4
QL12p031218 Quercus lobata HOM05D002602 ORTHO05D002661 3.9e-08 62.0 127 75.6
Actinidia14641 Actinidia chinensis HOM05D002250 ORTHO05D002393 5.0e-08 61.6 132 59.1
TAR383G0480 Trochodendron aralioides HOM05D002602 ORTHO05D002661 6.6e-08 61.2 118 76.3
FvH4_2g30190 Fragaria vesca HOM05D002602 ORTHO05D002661 8.6e-08 60.8 126 73.0
Phvul.009G098300 Phaseolus vulgaris HOM05D002602 ORTHO05D002661 8.6e-08 60.8 127 70.9
SGA_v2.0_scaffold169G38633 Striga asiatica HOM05D002602 ORTHO05D002661 1.1e-07 60.5 127 64.6
Eucgr.C02860 Eucalyptus grandis HOM05D002602 ORTHO05D002661 1.5e-07 60.1 130 71.5
Eucgr.L02512 Eucalyptus grandis HOM05D002602 ORTHO05D002661 1.5e-07 60.1 130 72.3
Rhsim03G0245200 Rhododendron simsii HOM05D002602 ORTHO05D002661 1.5e-07 60.1 129 73.6
FAN20G3150 Fragaria x ananassa HOM05D002602 ORTHO05D002661 1.9e-07 59.7 126 69.8
MSTRG.1648 Avicennia marina HOM05D002602 ORTHO05D002661 2.5e-07 59.3 130 66.2
MD15G1114900 Malus domestica HOM05D002602 ORTHO05D002661 3.3e-07 58.9 128 70.3
vmacro05448 Vaccinium macrocarpon HOM05D002602 ORTHO05D002661 4.3e-07 58.5 132 59.8
Hma1.2p1_0175F.1_g077310 Hydrangea macrophylla HOM05D002602 ORTHO05D002661 5.6e-07 58.2 87 60.9
MSTRG.14002 Avicennia marina HOM05D002602 ORTHO05D002661 9.5e-07 57.4 130 67.7
Rhsim02G0187000 Rhododendron simsii HOM05D002602 ORTHO05D002661 1.2e-06 57.0 132 57.6
MSTRG.11741 Avicennia marina HOM05D002602 ORTHO05D002661 1.6e-06 56.6 130 60.0
CSS0048428 Camellia sinensis var. sinensis HOM05D002602 ORTHO05D002661 1.6e-06 56.6 128 69.5
FAN27G2877 Fragaria x ananassa HOM05D002602 ORTHO05D002661 1.6e-06 56.6 126 69.8
Nitab4.5_0000125g0110 Nicotiana tabacum HOM05D002602 ORTHO05D002661 1.6e-06 56.6 130 71.5
SalBow8G1639 Salvia bowleyana HOM05D002602 ORTHO05D002661 1.6e-06 56.6 129 69.0
TAR636G3129 Trochodendron aralioides HOM05D002602 ORTHO05D002661 2.1e-06 56.2 129 35.7
COL.COLO4_24069 Corchorus olitorius HOM05D002602 ORTHO05D002661 2.8e-06 55.8 89 76.4
Actinidia13423 Actinidia chinensis HOM05D002250 ORTHO05D002393 4.7e-06 55.1 129 65.1
vmacro06191 Vaccinium macrocarpon HOM05D002602 ORTHO05D002661 4.7e-06 55.1 130 73.8
Dinv35879 Davidia involucrata HOM05D002602 ORTHO05D002661 8.1e-06 54.3 130 57.7
Medtr3g108100 Medicago truncatula HOM05D002602 ORTHO05D002661 8.1e-06 54.3 130 71.5


User provided reference genes

Program Settings