Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.2009 Acer truncatum HOM05D008165 ORTHO05D007516 3.4e-39 165.6 84 100.0
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 7.3e-18 94.7 84 58.3
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 2.1e-17 93.2 84 58.3
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 2.6e-15 86.3 83 53.0
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 4.4e-15 85.5 84 50.0
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 4.4e-15 85.5 84 51.2
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 5.8e-15 85.1 83 50.6
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 3.2e-13 79.3 81 49.4
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 7.1e-13 78.2 83 48.2
Cfa002265 Carpinus fangiana HOM05D008165 ORTHO05D007516 2.7e-12 76.3 82 50.0
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 2.7e-12 76.3 82 47.6
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 2.3e-11 73.2 84 47.6
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 5.1e-11 72.0 86 50.0
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 6.6e-11 71.6 84 44.0
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 1.1e-10 70.9 83 43.4
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 1.5e-10 70.5 86 47.7
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 1.9e-10 70.1 79 46.8
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.9e-10 70.1 68 52.9
TWI63G1030 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 5.6e-10 68.6 84 45.2
TWI63G1311 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 5.6e-10 68.6 84 45.2
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 7.3e-10 68.2 83 43.4
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 9.6e-10 67.8 79 44.3
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 1.2e-09 67.4 86 45.3
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 3.6e-09 65.9 83 44.6
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 6.2e-09 65.1 76 40.8
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 8.1e-09 64.7 84 46.4
MELO3C004482.2 Cucumis melo HOM05D008165 ORTHO05D007516 1.1e-08 64.3 75 42.7
CsaV3_2G003360 Cucumis sativus L. HOM05D008165 ORTHO05D007516 1.8e-08 63.5 72 44.4
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 1.8e-08 63.5 86 44.2
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 2.4e-08 63.2 82 41.5
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 4.0e-08 62.4 68 45.6
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 4.0e-08 62.4 82 42.7
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 4.0e-08 62.4 67 49.3
Prupe.7G252200 Prunus persica HOM05D008165 ORTHO05D007516 5.2e-08 62.0 82 40.2
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 2.0e-07 60.1 68 44.1
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 2.0e-07 60.1 65 49.2
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 2.6e-07 59.7 84 41.7
TWI34G2014 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 2.6e-07 59.7 80 43.8
Glyma.17G107800 Glycine max HOM05D013093 ORTHO05D007516 3.4e-07 59.3 83 39.8
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 3.4e-07 59.3 68 44.1
THA.LOC104826562 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 5.8e-07 58.5 90 41.1
Aqoxy7G03599 Aquilegia oxysepala HOM05D008165 ORTHO05D007516 1.3e-06 57.4 69 47.8
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 1.3e-06 57.4 79 40.5
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.3e-06 57.4 79 40.5
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 1.7e-06 57.0 68 42.6
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 2.9e-06 56.2 67 43.3
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 6.4e-06 55.1 60 48.3
THA.LOC104815296 Tarenaya hassleriana HOM05D010884 ORTHO05D007516 8.4e-06 54.7 85 42.4


User provided reference genes

Program Settings