Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 3.3e-52 208.0 97 100.0
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 2.5e-36 155.2 93 75.3
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 3.1e-34 148.3 93 73.1
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 1.2e-33 146.4 93 69.9
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 3.4e-33 144.8 87 73.6
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 3.4e-33 144.8 90 74.4
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 3.4e-33 144.8 90 74.4
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 6.4e-32 140.6 90 72.2
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 1.9e-31 139.0 99 64.6
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 3.2e-31 138.3 101 67.3
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 3.2e-31 138.3 82 68.3
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 5.4e-31 137.5 99 64.6
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 9.3e-31 136.7 77 79.2
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 2.7e-30 135.2 82 74.4
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 2.7e-30 135.2 77 77.9
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 4.6e-30 134.4 109 57.8
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 1.0e-29 133.3 87 66.7
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 1.0e-29 133.3 100 62.0
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 1.3e-29 132.9 89 65.2
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 5.1e-29 131.0 99 62.6
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 5.1e-29 131.0 96 64.6
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 8.7e-29 130.2 99 62.6
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 8.7e-29 130.2 76 75.0
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 1.1e-28 129.8 83 69.9
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 3.3e-28 128.3 91 63.7
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 3.3e-28 128.3 73 78.1
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 3.3e-28 128.3 82 72.0
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 5.6e-28 127.5 75 73.3
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 7.4e-28 127.1 75 72.0
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 7.4e-28 127.1 69 78.3
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 9.6e-28 126.7 71 76.1
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 1.6e-27 125.9 82 70.7
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 2.1e-27 125.6 76 71.1
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 2.1e-27 125.6 76 71.1
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 3.7e-27 124.8 82 65.9
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 4.8e-27 124.4 81 70.4
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 6.2e-27 124.0 76 71.1
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 8.1e-27 123.6 77 72.7
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.1e-26 123.2 63 84.1
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 1.1e-26 123.2 97 62.9
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 2.4e-26 122.1 91 61.5
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 2.4e-26 122.1 75 70.7
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 3.1e-26 121.7 78 70.5
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 3.1e-26 121.7 77 70.1
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 4.0e-26 121.3 77 71.4
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 4.0e-26 121.3 96 59.4
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 5.3e-26 120.9 75 70.7
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 6.9e-26 120.6 67 76.1
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 9.0e-26 120.2 78 69.2
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.2e-25 119.8 78 69.2
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 1.5e-25 119.4 75 70.7
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 1.5e-25 119.4 75 70.7
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.5e-25 119.4 75 70.7
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 2.6e-25 118.6 71 69.0
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 5.8e-25 117.5 76 69.7
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 9.9e-25 116.7 76 67.1
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 9.9e-25 116.7 73 69.9
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 1.3e-24 116.3 67 82.1
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 1.3e-24 116.3 78 66.7
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 1.7e-24 115.9 84 61.9
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 1.7e-24 115.9 60 80.0
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 2.9e-24 115.2 91 59.3
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 3.8e-24 114.8 74 67.6
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 6.4e-24 114.0 83 63.9
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 8.4e-24 113.6 83 63.9
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 8.4e-24 113.6 83 63.9
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 8.4e-24 113.6 87 59.8
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 1.1e-23 113.2 83 63.9
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 1.1e-23 113.2 73 65.8
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 3.2e-23 111.7 73 71.2
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 5.5e-23 110.9 93 57.0
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 5.5e-23 110.9 73 69.9
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 5.5e-23 110.9 62 74.2
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 5.5e-23 110.9 67 71.6
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 5.5e-23 110.9 73 68.5
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 9.3e-23 110.2 103 53.4
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 1.2e-22 109.8 66 68.2
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 1.6e-22 109.4 63 71.4
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.6e-22 109.4 83 63.9
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.6e-22 109.4 83 63.9
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 2.1e-22 109.0 83 62.7
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 2.1e-22 109.0 70 68.6
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 4.6e-22 107.8 61 72.1
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 4.6e-22 107.8 83 61.4
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 4.6e-22 107.8 87 57.5
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 2.3e-21 105.5 83 60.2
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 3.0e-21 105.1 76 65.8
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 6.7e-21 104.0 121 46.3
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.9e-20 102.4 75 60.0
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 2.5e-20 102.1 50 84.0
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 4.3e-20 101.3 59 76.3
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 4.3e-20 101.3 59 76.3
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 5.6e-20 100.9 102 51.0
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 2.1e-19 99.0 73 57.5
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 2.8e-19 98.6 58 74.1
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.1e-18 96.7 78 51.3
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 2.4e-18 95.5 66 65.2
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 4.0e-18 94.7 54 68.5
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.8e-16 88.2 69 59.4
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.8e-16 88.2 69 59.4
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 4.9e-16 87.8 71 57.7
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 6.5e-16 87.4 74 51.4
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 6.0e-14 80.9 81 45.7
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.9e-13 78.2 43 72.1
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 5.7e-12 74.3 42 71.4
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 4.1e-10 68.2 42 71.4
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 3.4e-09 65.1 64 42.2
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 4.5e-09 64.7 42 57.1
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 7.6e-09 63.9 28 96.4
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 1.7e-08 62.8 28 96.4
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 9.3e-07 57.0 40 62.5


User provided reference genes

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