Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 1.3e-79 299.7 150 100.0
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 1.9e-27 126.3 105 70.5
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 3.3e-19 99.0 71 76.1
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 1.8e-17 93.2 112 48.2
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 1.8e-17 93.2 112 48.2
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 4.1e-17 92.0 89 57.3
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 4.1e-17 92.0 89 57.3
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 4.1e-17 92.0 89 57.3
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 4.1e-17 92.0 89 57.3
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 4.1e-17 92.0 89 57.3
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 4.1e-17 92.0 122 45.9
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 6.9e-17 91.3 109 50.5
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 9.0e-17 90.9 88 56.8
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 9.0e-17 90.9 137 42.3
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 1.2e-16 90.5 105 51.4
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 1.2e-16 90.5 112 50.9
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 1.2e-16 90.5 105 51.4
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.2e-16 90.5 154 38.3
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.5e-16 90.1 105 50.5
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 2.0e-16 89.7 105 51.4
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 2.0e-16 89.7 90 54.4
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 2.6e-16 89.4 105 50.5
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.6e-16 89.4 144 39.6
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 3.4e-16 89.0 88 55.7
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 4.5e-16 88.6 89 53.9
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 4.5e-16 88.6 89 53.9
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 4.5e-16 88.6 89 53.9
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 4.5e-16 88.6 104 50.0
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 5.9e-16 88.2 144 38.9
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 5.9e-16 88.2 105 51.4
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 7.6e-16 87.8 105 49.5
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 7.6e-16 87.8 144 42.4
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 7.6e-16 87.8 155 39.4
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.0e-15 87.4 103 50.5
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.0e-15 87.4 90 57.8
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.0e-15 87.4 109 46.8
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 1.0e-15 87.4 106 50.0
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.3e-15 87.0 106 51.9
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 1.3e-15 87.0 106 51.9
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.3e-15 87.0 105 52.4
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.3e-15 87.0 112 48.2
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.7e-15 86.7 106 51.9
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.7e-15 86.7 104 48.1
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.7e-15 86.7 104 48.1
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.7e-15 86.7 110 46.4
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.7e-15 86.7 109 46.8
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.7e-15 86.7 109 46.8
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 2.9e-15 85.9 106 50.9
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 2.9e-15 85.9 87 52.9
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 2.9e-15 85.9 105 47.6
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 3.8e-15 85.5 106 47.2
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 3.8e-15 85.5 144 37.5
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 3.8e-15 85.5 105 47.6
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 5.0e-15 85.1 106 50.0
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 5.0e-15 85.1 87 54.0
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 6.5e-15 84.7 104 47.1
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 6.5e-15 84.7 110 47.3
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 6.5e-15 84.7 105 49.5
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 8.5e-15 84.3 110 49.1
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.1e-14 84.0 110 46.4
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.1e-14 84.0 110 46.4
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 1.1e-14 84.0 104 48.1
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 1.4e-14 83.6 95 53.7
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.4e-14 83.6 115 45.2
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 1.4e-14 83.6 104 47.1
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 1.4e-14 83.6 111 45.0
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 1.4e-14 83.6 105 48.6
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.9e-14 83.2 104 46.2
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.9e-14 83.2 110 44.5
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 4.2e-14 82.0 104 47.1
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 5.5e-14 81.6 107 48.6
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 5.5e-14 81.6 103 46.6
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 7.2e-14 81.3 88 51.1
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 7.2e-14 81.3 87 52.9
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 7.2e-14 81.3 87 52.9
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 7.2e-14 81.3 126 43.7
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 7.2e-14 81.3 107 48.6
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 7.2e-14 81.3 107 46.7
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 9.3e-14 80.9 104 47.1
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 9.3e-14 80.9 106 50.0
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 2.7e-13 79.3 104 44.2
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 2.7e-13 79.3 122 42.6
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 3.6e-13 79.0 110 41.8
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 3.6e-13 79.0 112 44.6
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.6e-13 79.0 106 49.1
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 3.6e-13 79.0 104 46.2
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 7.9e-13 77.8 109 47.7
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 7.9e-13 77.8 110 40.0
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 2.3e-12 76.3 109 41.3
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 2.3e-12 76.3 84 51.2
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 3.0e-12 75.9 87 49.4
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 3.0e-12 75.9 106 48.1
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 3.0e-12 75.9 88 52.3
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 3.0e-12 75.9 90 47.8
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 3.9e-12 75.5 104 42.3
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 3.9e-12 75.5 104 45.2
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 5.1e-12 75.1 86 50.0
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 5.1e-12 75.1 86 45.3
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 6.7e-12 74.7 109 44.0
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 6.7e-12 74.7 98 43.9
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 8.8e-12 74.3 103 44.7
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.1e-11 73.9 104 44.2
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 1.9e-11 73.2 87 46.0
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 4.3e-11 72.0 87 44.8
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 5.7e-11 71.6 114 41.2
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 7.4e-11 71.2 87 44.8
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 7.4e-11 71.2 87 44.8
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.3e-10 70.5 63 61.9
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 3.1e-09 65.9 88 46.6
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 4.1e-09 65.5 88 44.3
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 6.9e-09 64.7 80 53.8
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 1.5e-08 63.5 66 57.6
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 1.5e-08 63.5 139 34.5
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.7e-07 60.1 104 35.6
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 3.8e-07 58.9 84 48.8
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 3.8e-07 58.9 87 37.9
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 5.0e-07 58.5 103 37.9
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 6.5e-07 58.2 103 38.8
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 6.5e-07 58.2 103 38.8
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 8.5e-07 57.8 104 36.5
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 7.2e-06 54.7 45 68.9
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 9.4e-06 54.3 30 73.3


User provided reference genes

Program Settings