Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 4.8e-115 417.9 221 100.0
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 4.1e-74 282.0 218 68.8
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 9.1e-74 280.8 219 68.9
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 2.0e-73 279.6 219 68.9
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 7.7e-73 277.7 219 68.5
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 8.5e-72 274.2 219 68.9
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 5.2e-69 265.0 219 64.4
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 2.2e-67 259.6 128 100.0
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.8e-66 256.5 222 64.0
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 3.1e-66 255.8 220 62.7
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.1e-66 255.8 219 64.4
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 9.1e-66 254.2 219 62.6
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 2.6e-65 252.7 224 62.9
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 2.2e-64 249.6 223 63.7
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 1.9e-63 246.5 224 65.2
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 2.5e-63 246.1 218 62.8
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 3.2e-63 245.7 227 63.4
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 4.2e-63 245.4 211 61.6
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 5.5e-63 245.0 223 61.9
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.2e-62 243.8 224 60.3
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 1.2e-62 243.8 224 60.7
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 1.2e-62 243.8 223 61.9
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.6e-62 243.4 219 61.6
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.7e-62 241.9 223 61.4
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.8e-61 240.0 223 61.4
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 3.0e-61 239.2 223 59.6
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 4.0e-61 238.8 234 58.1
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 3.3e-60 235.7 221 59.3
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 5.7e-60 235.0 221 57.9
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 7.5e-60 234.6 223 60.5
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 1.3e-59 233.8 220 60.9
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.7e-59 233.4 223 60.5
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 2.2e-59 233.0 222 60.8
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 4.8e-59 231.9 180 68.9
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.8e-58 229.9 224 56.7
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.4e-58 229.6 242 55.8
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 3.1e-58 229.2 223 58.7
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 3.1e-58 229.2 193 65.3
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 1.0e-56 224.2 221 57.0
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 2.9e-56 222.6 198 60.1
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 2.9e-56 222.6 220 57.3
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.9e-55 219.9 221 56.6
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 3.2e-55 219.2 192 58.3
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 4.2e-55 218.8 198 56.6
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 4.2e-55 218.8 218 56.9
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 7.2e-55 218.0 191 61.8
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.2e-54 217.2 195 60.5
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.6e-54 216.9 225 55.1
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.6e-54 216.9 243 53.1
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 1.6e-54 216.9 227 52.9
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.6e-54 216.9 223 57.8
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 2.1e-54 216.5 186 59.1
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 2.7e-54 216.1 169 64.5
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 3.6e-54 215.7 188 59.0
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 4.7e-54 215.3 193 58.5
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 6.1e-54 214.9 180 60.6
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 6.1e-54 214.9 180 60.6
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 6.1e-54 214.9 180 60.6
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 6.1e-54 214.9 221 55.7
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.0e-53 214.2 180 60.0
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.4e-53 213.8 191 57.6
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 1.8e-53 213.4 222 56.8
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 6.8e-53 211.5 180 59.4
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 2.0e-52 209.9 189 62.4
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 2.2e-51 206.5 200 57.0
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 3.7e-51 205.7 218 53.2
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 1.1e-50 204.1 218 54.1
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.1e-50 204.1 144 71.5
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.8e-50 203.4 225 52.4
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 7.0e-50 201.4 211 52.1
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 2.0e-49 199.9 260 46.5
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 3.5e-49 199.1 151 64.9
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 4.5e-49 198.7 225 52.9
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 5.9e-49 198.4 195 60.5
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 1.1e-47 194.1 214 51.9
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 1.1e-47 194.1 214 51.4
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 1.5e-47 193.7 156 61.5
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 9.5e-47 191.0 152 64.5
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 4.7e-46 188.7 225 51.6
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.0e-45 187.6 157 63.1
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 3.4e-44 182.6 229 48.9
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 4.4e-44 182.2 228 48.7
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 5.7e-44 181.8 174 58.0
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 2.8e-43 179.5 144 63.2
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 3.7e-43 179.1 198 55.1
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.1e-42 177.6 200 53.5
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 5.4e-42 175.3 164 54.9
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.2e-41 174.1 168 57.1
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 2.3e-40 169.9 228 46.9
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 3.8e-40 169.1 168 54.8
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 5.6e-39 165.2 226 47.3
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.5e-36 157.1 232 47.0
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 1.1e-23 114.4 161 42.9
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 1.8e-21 107.1 152 49.3
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 2.2e-19 100.1 183 37.2
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 2.2e-19 100.1 194 38.1
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.2e-18 96.3 149 40.3
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 4.4e-12 75.9 66 53.0
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 2.9e-11 73.2 200 27.5
Haze_18114 Corylus avellana HOM05D007388 ORTHO05D009421 5.1e-08 62.4 92 50.0
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 3.3e-07 59.7 104 32.7
FAN15G1408 Fragaria x ananassa HOM05D007388 ORTHO05D009421 7.3e-07 58.5 98 46.9
QL07p047550 Quercus lobata HOM05D007388 ORTHO05D009421 2.1e-06 57.0 91 48.4
QL11p041786 Quercus lobata HOM05D007388 ORTHO05D009421 6.2e-06 55.5 91 47.3
QL11p041555 Quercus lobata HOM05D007388 ORTHO05D009421 8.1e-06 55.1 91 47.3


User provided reference genes

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