Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 2.2e-62 242.3 139 100.0
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 5.4e-48 194.5 133 82.0
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.6e-44 183.0 132 79.5
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 6.4e-41 171.0 132 75.0
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 3.5e-39 165.2 130 73.1
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 6.0e-39 164.5 133 71.4
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.0e-38 163.7 131 71.8
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 3.0e-38 162.2 132 70.5
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 6.6e-38 161.0 132 71.2
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 7.3e-37 157.5 132 74.2
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 1.2e-36 156.8 132 67.4
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 2.8e-36 155.6 131 73.3
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 2.8e-36 155.6 134 70.1
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 8.1e-36 154.1 134 69.4
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.4e-35 153.3 146 73.3
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 2.3e-35 152.5 122 72.1
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 6.8e-35 151.0 122 77.0
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.2e-34 150.2 128 74.2
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.2e-34 150.2 128 74.2
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 1.5e-34 149.8 138 68.8
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 4.4e-34 148.3 128 70.3
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 2.2e-33 146.0 128 72.7
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 4.9e-33 144.8 128 71.9
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.4e-32 143.3 134 65.7
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.4e-32 143.3 134 65.7
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 1.4e-32 143.3 130 67.7
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 1.2e-31 140.2 147 64.6
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.1e-31 139.4 134 64.2
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 1.3e-30 136.7 122 68.0
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 3.0e-30 135.6 133 64.7
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 3.0e-30 135.6 134 64.9
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 3.0e-30 135.6 136 68.4
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 3.9e-30 135.2 151 58.3
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 1.5e-29 133.3 135 60.7
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 3.3e-29 132.1 130 63.1
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 5.6e-29 131.3 122 63.9
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 9.5e-29 130.6 131 61.8
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 3.6e-28 128.6 132 62.9
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 1.1e-27 127.1 124 58.1
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 4.0e-27 125.2 133 61.7
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 5.2e-27 124.8 137 67.9
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 8.9e-27 124.0 130 60.8
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.0e-26 122.9 128 60.2
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 5.8e-26 121.3 122 63.9
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 9.9e-26 120.6 137 57.7
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 9.9e-26 120.6 138 56.5
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 1.3e-25 120.2 122 63.1
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.2e-25 119.4 131 57.3
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.2e-25 119.4 135 65.9
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 3.7e-25 118.6 122 59.8
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.9e-24 116.3 121 62.0
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 5.4e-24 114.8 122 59.0
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 1.2e-23 113.6 108 64.8
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 2.1e-23 112.8 121 61.2
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 2.7e-23 112.5 85 76.5
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.7e-22 109.8 144 59.0
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 8.6e-22 107.5 119 58.0
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 3.6e-20 102.1 106 60.4
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 4.7e-20 101.7 99 61.6
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.1e-19 100.5 126 57.9
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.4e-19 100.1 139 57.6
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.8e-19 99.8 153 46.4
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.1e-19 99.0 120 51.7
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 4.0e-19 98.6 127 52.8
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 5.2e-19 98.2 114 62.3
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 5.2e-19 98.2 127 52.8
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 5.2e-19 98.2 107 57.0
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 5.2e-19 98.2 109 56.0
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 6.8e-19 97.8 137 48.9
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 1.2e-18 97.1 116 54.3
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 1.5e-18 96.7 104 58.7
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 3.4e-18 95.5 106 54.7
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 7.6e-18 94.4 121 57.0
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.7e-17 93.2 82 62.2
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 2.2e-17 92.8 136 56.6
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 2.9e-17 92.4 110 50.9
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 8.4e-17 90.9 115 63.5
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.4e-16 90.1 107 55.1
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 1.4e-16 90.1 101 60.4
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 7.1e-16 87.8 124 57.3
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 9.3e-16 87.4 111 47.7
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 9.3e-16 87.4 104 51.9
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 9.3e-16 87.4 135 45.9
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 4.6e-15 85.1 138 54.3
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.3e-14 83.6 106 59.4
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.3e-14 83.6 104 51.0
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.7e-14 83.2 107 57.9
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 2.3e-14 82.8 106 57.5
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 3.9e-14 82.0 44 93.2
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 5.1e-14 81.6 96 55.2
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 5.1e-14 81.6 42 97.6
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.1e-13 80.5 115 44.3
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.5e-13 80.1 47 85.1
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 2.5e-13 79.3 111 57.7
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 2.5e-13 79.3 82 59.8
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 3.3e-13 79.0 43 93.0
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 4.3e-13 78.6 44 90.9
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 4.3e-13 78.6 44 90.9
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 9.6e-13 77.4 110 45.5
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-12 77.0 44 88.6
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 1.3e-12 77.0 42 92.9
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 2.1e-12 76.3 101 48.5
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 2.8e-12 75.9 41 92.7
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 2.8e-12 75.9 41 92.7
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 2.8e-12 75.9 41 92.7
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 3.6e-12 75.5 46 84.8
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 4.8e-12 75.1 40 95.0
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 4.8e-12 75.1 40 95.0
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 8.1e-12 74.3 40 95.0
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 8.1e-12 74.3 43 90.7
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.8e-11 73.2 38 97.4
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 2.2e-09 66.2 40 80.0
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.4e-08 63.5 123 46.3
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 1.4e-08 63.5 116 43.1
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 1.9e-08 63.2 65 55.4
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 5.4e-08 61.6 42 78.6
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 9.3e-08 60.8 41 75.6
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 4.6e-07 58.5 123 38.2
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 7.9e-07 57.8 40 75.0
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 1.3e-06 57.0 41 73.2
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 3.0e-06 55.8 32 81.2
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 6.6e-06 54.7 130 36.2
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 8.7e-06 54.3 32 78.1


User provided reference genes

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